RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 PFN1P07737 140 aaKnown RBP4.36□□□□□ -1.71
SMG1-201ENST00000330588 TMEM183BQ1AE95 376 aa4.36□□□□□ -1.71
SMG1-201ENST00000330588 ESRGQ1W209 222 aa4.36□□□□□ -1.71
SMG1-201ENST00000330588 DPPA3Q6W0C5 159 aa4.36□□□□□ -1.71
SMG1-201ENST00000330588 NEGR1Q7Z3B1 354 aa4.36□□□□□ -1.71
SMG1-201ENST00000330588 TMEM183AQ8IXX5 376 aa4.36□□□□□ -1.71
SMG1-201ENST00000330588 TVP23CQ96ET8 276 aa4.36□□□□□ -1.71
SMG1-201ENST00000330588 MDFICQ9P1T7 246 aa4.36□□□□□ -1.71
SMG1-201ENST00000330588 SS18L2Q9UHA2 77 aa4.36□□□□□ -1.71
SMG1-201ENST00000330588 HHLA3Q9XRX5 114 aa4.36□□□□□ -1.71
SMG1-201ENST00000330588 V9GYY9 64 aa4.36□□□□□ -1.71
SMG1-201ENST00000330588 RYR3Q15413 4870 aa4.35□□□□□ -1.71
SMG1-201ENST00000330588 RYR2Q92736 4967 aa4.35□□□□□ -1.71
SMG1-201ENST00000330588 A0A0D9SG52 128 aa4.35□□□□□ -1.71
SMG1-201ENST00000330588 A0A0J9YY99 117 aa4.35□□□□□ -1.71
SMG1-201ENST00000330588 KRTAP29-1A8MX34 341 aaPredicted RBP4.35□□□□□ -1.71
SMG1-201ENST00000330588 C9JCJ5 164 aa4.35□□□□□ -1.71
SMG1-201ENST00000330588 SEC11BP0C7V7 166 aa4.35□□□□□ -1.71
SMG1-201ENST00000330588 EIF5AP63241 154 aaKnown RBP4.35□□□□□ -1.71
SMG1-201ENST00000330588 MUC21Q5SSG8 566 aa4.35□□□□□ -1.71
SMG1-201ENST00000330588 C10orf91Q5T1B1 145 aa4.35□□□□□ -1.71
SMG1-201ENST00000330588 KCNRGQ8N5I3 272 aa4.35□□□□□ -1.71
SMG1-201ENST00000330588 PCNPQ8WW12 178 aaKnown RBP4.35□□□□□ -1.71
SMG1-201ENST00000330588 C9orf85Q96MD7 179 aa4.35□□□□□ -1.71
SMG1-201ENST00000330588 TXNDC17Q9BRA2 123 aa4.35□□□□□ -1.71
SMG1-201ENST00000330588 SH3BGRL3Q9H299 93 aa4.35□□□□□ -1.71
SMG1-201ENST00000330588 MRPL16Q9NX20 251 aaKnown RBP4.35□□□□□ -1.71
SMG1-201ENST00000330588 CARHSP1Q9Y2V2 147 aaKnown RBP4.35□□□□□ -1.71
SMG1-201ENST00000330588 TRAV8-1A0A0A6YYK1 113 aa4.34□□□□□ -1.71
SMG1-201ENST00000330588 TRGV4A0A0C4DH28 118 aa4.34□□□□□ -1.71
SMG1-201ENST00000330588 MT-ND4LP03901 98 aa4.34□□□□□ -1.71
SMG1-201ENST00000330588 GNG5P63218 68 aa4.34□□□□□ -1.71
SMG1-201ENST00000330588 JOSD1Q15040 202 aaPredicted RBP4.34□□□□□ -1.71
SMG1-201ENST00000330588 PEA15Q15121 130 aa4.34□□□□□ -1.71
SMG1-201ENST00000330588 ZNF726P1Q15940 193 aa4.34□□□□□ -1.71
SMG1-201ENST00000330588 LGALSLQ3ZCW2 172 aaPredicted RBP4.34□□□□□ -1.71
SMG1-201ENST00000330588 Q6ZQT7 251 aa4.34□□□□□ -1.71
SMG1-201ENST00000330588 FMC1Q96HJ9 113 aa4.34□□□□□ -1.71
SMG1-201ENST00000330588 SIGMAR1Q99720 223 aa4.34□□□□□ -1.71
SMG1-201ENST00000330588 CYTL1Q9NRR1 136 aa4.34□□□□□ -1.71
SMG1-201ENST00000330588 MUC4Q99102 2169 aa4.34□□□□□ -1.72
SMG1-201ENST00000330588 TRAV9-2A0A087WT02 112 aa4.33□□□□□ -1.72
SMG1-201ENST00000330588 TRBV6-4A0A1B0GX49 114 aa4.33□□□□□ -1.72
SMG1-201ENST00000330588 MAP1LC3B2A6NCE7 125 aa4.33□□□□□ -1.72
SMG1-201ENST00000330588 COLCA2A8K830 154 aa4.33□□□□□ -1.72
SMG1-201ENST00000330588 FABP5P3A8MUU1 101 aa4.33□□□□□ -1.72
SMG1-201ENST00000330588 K7EQD1 137 aa4.33□□□□□ -1.72
SMG1-201ENST00000330588 PEX7O00628 323 aa4.33□□□□□ -1.72
SMG1-201ENST00000330588 HMGB3O15347 200 aaKnown RBP4.33□□□□□ -1.72
SMG1-201ENST00000330588 GCGP01275 180 aa4.33□□□□□ -1.72
SMG1-201ENST00000330588 SMIM17P0DL12 118 aa4.33□□□□□ -1.72
SMG1-201ENST00000330588 GATA1P15976 413 aaPredicted RBP4.33□□□□□ -1.72
SMG1-201ENST00000330588 SRIP30626 198 aa4.33□□□□□ -1.72
SMG1-201ENST00000330588 ZFP2Q6ZN57 461 aa4.33□□□□□ -1.72
SMG1-201ENST00000330588 NFE4Q86UQ8 179 aa4.33□□□□□ -1.72
SMG1-201ENST00000330588 MBD3L1Q8WWY6 194 aa4.33□□□□□ -1.72
SMG1-201ENST00000330588 MAP1LC3BQ9GZQ8 125 aa4.33□□□□□ -1.72
SMG1-201ENST00000330588 PRO1933Q9H354 126 aa4.33□□□□□ -1.72
SMG1-201ENST00000330588 SACSQ9NZJ4 4579 aa4.32□□□□□ -1.72
SMG1-201ENST00000330588 GNRH2O43555 120 aa4.32□□□□□ -1.72
SMG1-201ENST00000330588 HSBP1O75506 76 aa4.32□□□□□ -1.72
SMG1-201ENST00000330588 CDK2AP2O75956 126 aa4.32□□□□□ -1.72
SMG1-201ENST00000330588 NXPH4O95158 308 aa4.32□□□□□ -1.72
SMG1-201ENST00000330588 CXCL1P09341 107 aa4.32□□□□□ -1.72
SMG1-201ENST00000330588 DNAH10OSP0CZ25 163 aa4.32□□□□□ -1.72
SMG1-201ENST00000330588 MGST1P10620 155 aaKnown RBP4.32□□□□□ -1.72
SMG1-201ENST00000330588 RNASE3P12724 160 aaKnown RBP4.32□□□□□ -1.72
SMG1-201ENST00000330588 ZNF80P51504 273 aaPredicted RBP4.32□□□□□ -1.72
SMG1-201ENST00000330588 EIF5AL1Q6IS14 154 aaKnown RBP4.32□□□□□ -1.72
SMG1-201ENST00000330588 LYPD5Q6UWN5 251 aa4.32□□□□□ -1.72
SMG1-201ENST00000330588 Q86TA4 180 aa4.32□□□□□ -1.72
SMG1-201ENST00000330588 ZNF664Q8N3J9 261 aa4.32□□□□□ -1.72
SMG1-201ENST00000330588 C10orf126Q8N4M7 172 aa4.32□□□□□ -1.72
SMG1-201ENST00000330588 PRADC1Q9BSG0 188 aa4.32□□□□□ -1.72
SMG1-201ENST00000330588 KRTAP1-5Q9BYS1 174 aa4.32□□□□□ -1.72
SMG1-201ENST00000330588 SPANXCQ9NY87 97 aa4.32□□□□□ -1.72
SMG1-201ENST00000330588 IL36BQ9NZH7 164 aa4.32□□□□□ -1.72
SMG1-201ENST00000330588 TRAV1-1A0A0B4J248 108 aa4.31□□□□□ -1.72
SMG1-201ENST00000330588 A8MWV9 139 aa4.31□□□□□ -1.72
SMG1-201ENST00000330588 RHODO00212 210 aa4.31□□□□□ -1.72
SMG1-201ENST00000330588 BCL2L11O43521 198 aa4.31□□□□□ -1.72
SMG1-201ENST00000330588 LTAP01374 205 aa4.31□□□□□ -1.72
SMG1-201ENST00000330588 RHOHQ15669 191 aa4.31□□□□□ -1.72
SMG1-201ENST00000330588 ZNF876PQ49A33 203 aa4.31□□□□□ -1.72
SMG1-201ENST00000330588 TMEM97Q5BJF2 176 aa4.31□□□□□ -1.72
SMG1-201ENST00000330588 CFAP126Q5VTH2 177 aa4.31□□□□□ -1.72
SMG1-201ENST00000330588 Q6ZRN7 208 aaPredicted RBP4.31□□□□□ -1.72
SMG1-201ENST00000330588 FA2HQ7L5A8 372 aa4.31□□□□□ -1.72
SMG1-201ENST00000330588 PRNTQ86SH4 94 aa4.31□□□□□ -1.72
SMG1-201ENST00000330588 SMCO4Q9NRQ5 59 aa4.31□□□□□ -1.72
SMG1-201ENST00000330588 SPANXB1Q9NS25 103 aaPredicted RBP4.31□□□□□ -1.72
SMG1-201ENST00000330588 A0A087WX48 190 aa4.31□□□□□ -1.72
SMG1-201ENST00000330588 IGKV3D-20A0A0C4DH25 116 aa4.31□□□□□ -1.72
SMG1-201ENST00000330588 KANTRA0A1W2PQU2 76 aa4.31□□□□□ -1.72
SMG1-201ENST00000330588 IGHV3-53P01767 116 aa4.31□□□□□ -1.72
SMG1-201ENST00000330588 SFTA3P0C7M3 94 aa4.31□□□□□ -1.72
SMG1-201ENST00000330588 ASIPP42127 132 aa4.31□□□□□ -1.72
SMG1-201ENST00000330588 RHEBQ15382 184 aa4.31□□□□□ -1.72
SMG1-201ENST00000330588 ZNF506Q5JVG8 444 aa4.31□□□□□ -1.72
SMG1-201ENST00000330588 FAM162BQ5T6X4 162 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms