RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 Q8N1Y9 231 aa14.72□□□□□ -0.05
SOX2-201ENST00000325404 KLHL30-AS1Q8NEE0 82 aa14.72□□□□□ -0.05
SOX2-201ENST00000325404 MDFICQ9P1T7 246 aa14.72□□□□□ -0.05
SOX2-201ENST00000325404 ZANQ9Y493 2812 aa14.72□□□□□ -0.05
SOX2-201ENST00000325404 FSHBP01225 129 aa14.71□□□□□ -0.05
SOX2-201ENST00000325404 SLC25A29Q8N8R3 303 aa14.71□□□□□ -0.05
SOX2-201ENST00000325404 EDA2RQ9HAV5 297 aa14.71□□□□□ -0.05
SOX2-201ENST00000325404 MRPL16Q9NX20 251 aaKnown RBP14.71□□□□□ -0.05
SOX2-201ENST00000325404 LYRM7Q5U5X0 104 aa14.71□□□□□ -0.05
SOX2-201ENST00000325404 ELANEP08246 267 aa14.7□□□□□ -0.06
SOX2-201ENST00000325404 AMTNQ6UX39 209 aa14.7□□□□□ -0.06
SOX2-201ENST00000325404 ZNRF2Q8NHG8 242 aa14.7□□□□□ -0.06
SOX2-201ENST00000325404 WFDC12Q8WWY7 111 aa14.7□□□□□ -0.06
SOX2-201ENST00000325404 DLX4Q92988 240 aaPredicted RBP14.7□□□□□ -0.06
SOX2-201ENST00000325404 TRGV11A0A075B6L2 103 aa14.69□□□□□ -0.06
SOX2-201ENST00000325404 ZNF56Q15929 161 aa14.69□□□□□ -0.06
SOX2-201ENST00000325404 HELZ2Q9BYK8 2649 aaKnown RBP14.69□□□□□ -0.06
SOX2-201ENST00000325404 PRRC2AP48634 2157 aaKnown RBP14.69□□□□□ -0.06
SOX2-201ENST00000325404 SCGB1A1P11684 91 aa14.69□□□□□ -0.06
SOX2-201ENST00000325404 UBE2D3P61077 147 aa14.69□□□□□ -0.06
SOX2-201ENST00000325404 UBE2D2P62837 147 aa14.69□□□□□ -0.06
SOX2-201ENST00000325404 ATP6V0E2Q8NHE4 81 aa14.69□□□□□ -0.06
SOX2-201ENST00000325404 FAM74A4Q5TZK3 123 aa14.68□□□□□ -0.06
SOX2-201ENST00000325404 AMELXQ99217 191 aa14.68□□□□□ -0.06
SOX2-201ENST00000325404 IGHV3-30P01768 117 aa14.68□□□□□ -0.06
SOX2-201ENST00000325404 IGHV3-30-5P0DP03 117 aa14.68□□□□□ -0.06
SOX2-201ENST00000325404 TMEM170BQ5T4T1 132 aa14.68□□□□□ -0.06
SOX2-201ENST00000325404 C20orf203Q8NBC4 194 aa14.68□□□□□ -0.06
SOX2-201ENST00000325404 ZFHX3Q15911 3703 aa14.68□□□□□ -0.06
SOX2-201ENST00000325404 TRAV12-2A0A075B6T6 113 aa14.67□□□□□ -0.06
SOX2-201ENST00000325404 I3L3M4 83 aa14.67□□□□□ -0.06
SOX2-201ENST00000325404 TSPAN13O95857 204 aa14.67□□□□□ -0.06
SOX2-201ENST00000325404 ETDBQ3ZM63 59 aa14.67□□□□□ -0.06
SOX2-201ENST00000325404 NDUFA11Q86Y39 141 aa14.67□□□□□ -0.06
SOX2-201ENST00000325404 J3QQQ9 107 aa14.67□□□□□ -0.06
SOX2-201ENST00000325404 SPATA25Q9BR10 227 aa14.67□□□□□ -0.06
SOX2-201ENST00000325404 LEPROTO15243 131 aa14.66□□□□□ -0.06
SOX2-201ENST00000325404 P0DMU3 169 aa14.66□□□□□ -0.06
SOX2-201ENST00000325404 FAM231AP0DMU4 169 aa14.66□□□□□ -0.06
SOX2-201ENST00000325404 FAM231CP0DMU5 169 aa14.66□□□□□ -0.06
SOX2-201ENST00000325404 EMP1P54849 157 aa14.66□□□□□ -0.06
SOX2-201ENST00000325404 TSPEAR-AS2P59090 65 aa14.66□□□□□ -0.06
SOX2-201ENST00000325404 CFAP126Q5VTH2 177 aa14.66□□□□□ -0.06
SOX2-201ENST00000325404 UBE2E2Q96LR5 201 aa14.66□□□□□ -0.06
SOX2-201ENST00000325404 SIGMAR1Q99720 223 aa14.66□□□□□ -0.06
SOX2-201ENST00000325404 SPAG8Q99932 426 aaPredicted RBP14.66□□□□□ -0.06
SOX2-201ENST00000325404 SPINK13Q1W4C9 94 aa14.65□□□□□ -0.06
SOX2-201ENST00000325404 C10orf99Q6UWK7 81 aa14.65□□□□□ -0.06
SOX2-201ENST00000325404 SH2D6Q7Z4S9 175 aa14.65□□□□□ -0.06
SOX2-201ENST00000325404 TMEM223A0PJW6 202 aa14.65□□□□□ -0.06
SOX2-201ENST00000325404 GAGE12HA6NDE8 117 aa14.65□□□□□ -0.06
SOX2-201ENST00000325404 LGALS3P17931 250 aaKnown RBP14.65□□□□□ -0.06
SOX2-201ENST00000325404 SYNJ2BPP57105 145 aa14.65□□□□□ -0.06
SOX2-201ENST00000325404 A8MTW9 85 aa14.64□□□□□ -0.07
SOX2-201ENST00000325404 CRYBA4P53673 196 aa14.64□□□□□ -0.07
SOX2-201ENST00000325404 Q6YL49 198 aa14.64□□□□□ -0.07
SOX2-201ENST00000325404 WFDC11Q8NEX6 87 aa14.64□□□□□ -0.07
SOX2-201ENST00000325404 VPREB3Q9UKI3 123 aa14.64□□□□□ -0.07
SOX2-201ENST00000325404 PIK3CD-AS1Q5SR53 167 aa14.64□□□□□ -0.07
SOX2-201ENST00000325404 TRBV20-1A0A075B6N2 111 aa14.63□□□□□ -0.07
SOX2-201ENST00000325404 IGKV3-20P01619 116 aa14.63□□□□□ -0.07
SOX2-201ENST00000325404 PYGO1Q9Y3Y4 419 aa14.63□□□□□ -0.07
SOX2-201ENST00000325404 TSSC4Q9Y5U2 329 aaPredicted RBP14.63□□□□□ -0.07
SOX2-201ENST00000325404 CCDC168Q8NDH2 2452 aa14.63□□□□□ -0.07
SOX2-201ENST00000325404 CLUHP3Q96NS8 147 aa14.62□□□□□ -0.07
SOX2-201ENST00000325404 NBPF19A0A087WUL8 3843 aa14.62□□□□□ -0.07
SOX2-201ENST00000325404 CFC1BP0CG36 223 aa14.62□□□□□ -0.07
SOX2-201ENST00000325404 CFC1P0CG37 223 aa14.62□□□□□ -0.07
SOX2-201ENST00000325404 HOXD3P31249 432 aaPredicted RBP14.62□□□□□ -0.07
SOX2-201ENST00000325404 TRAV2A0A0B4J234 112 aa14.61□□□□□ -0.07
SOX2-201ENST00000325404 C10orf126Q8N4M7 172 aa14.61□□□□□ -0.07
SOX2-201ENST00000325404 PTH2Q96A98 100 aa14.61□□□□□ -0.07
SOX2-201ENST00000325404 C1QTNF4Q9BXJ3 329 aa14.61□□□□□ -0.07
SOX2-201ENST00000325404 ITPR3Q14573 2671 aa14.6□□□□□ -0.07
SOX2-201ENST00000325404 RHODO00212 210 aa14.6□□□□□ -0.07
SOX2-201ENST00000325404 APOMO95445 188 aa14.6□□□□□ -0.07
SOX2-201ENST00000325404 IGLV4-3A0A075B6K6 122 aa14.6□□□□□ -0.07
SOX2-201ENST00000325404 ZNF22P17026 224 aaPredicted RBP14.6□□□□□ -0.07
SOX2-201ENST00000325404 VCX2Q9H322 139 aa14.6□□□□□ -0.07
SOX2-201ENST00000325404 ZNF702PQ9H963 129 aa14.6□□□□□ -0.07
SOX2-201ENST00000325404 PRO1854Q9UHT4 67 aa14.6□□□□□ -0.07
SOX2-201ENST00000325404 TEX15Q9BXT5 2789 aa14.6□□□□□ -0.07
SOX2-201ENST00000325404 LOC107984156A0A0G2JMH3 177 aa14.59□□□□□ -0.07
SOX2-201ENST00000325404 SMCPP49901 116 aaPredicted RBP14.59□□□□□ -0.07
SOX2-201ENST00000325404 ARL17AQ8IVW1 177 aa14.59□□□□□ -0.07
SOX2-201ENST00000325404 DEFB104AQ8WTQ1 72 aa14.59□□□□□ -0.07
SOX2-201ENST00000325404 AZU1P20160 251 aa14.59□□□□□ -0.07
SOX2-201ENST00000325404 PSMB2P49721 201 aa14.58□□□□□ -0.07
SOX2-201ENST00000325404 FOXI1Q12951 378 aa14.58□□□□□ -0.07
SOX2-201ENST00000325404 SBSPONQ8IVN8 264 aa14.58□□□□□ -0.07
SOX2-201ENST00000325404 TCTEX1D4Q5JR98 221 aa14.57□□□□□ -0.08
SOX2-201ENST00000325404 TEX29Q8N6K0 151 aa14.57□□□□□ -0.08
SOX2-201ENST00000325404 OPRPNQ99935 248 aaPredicted RBP14.57□□□□□ -0.08
SOX2-201ENST00000325404 TLN2Q9Y4G6 2542 aa14.57□□□□□ -0.08
SOX2-201ENST00000325404 A8MWV9 139 aa14.56□□□□□ -0.08
SOX2-201ENST00000325404 MTURNQ8N3F0 131 aa14.56□□□□□ -0.08
SOX2-201ENST00000325404 A0A0B4J2C4 111 aa14.55□□□□□ -0.08
SOX2-201ENST00000325404 GTSF1LQ9H1H1 148 aa14.55□□□□□ -0.08
SOX2-201ENST00000325404 RBMY1A1P0DJD3 496 aaKnown RBP14.55□□□□□ -0.08
SOX2-201ENST00000325404 RBMY1CP0DJD4 496 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 780.9 ms