RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 HIST1H2BMQ99879 126 aa12.32□□□□□ -0.44
TMEM88-201ENST00000301599 OSTCQ9NRP0 149 aa12.32□□□□□ -0.44
TMEM88-201ENST00000301599 IL36BQ9NZH7 164 aa12.32□□□□□ -0.44
TMEM88-201ENST00000301599 CRIP1P50238 77 aa12.31□□□□□ -0.44
TMEM88-201ENST00000301599 UBE2G1P62253 170 aa12.31□□□□□ -0.44
TMEM88-201ENST00000301599 LINC01556Q5JQF7 62 aa12.31□□□□□ -0.44
TMEM88-201ENST00000301599 COX8CQ7Z4L0 72 aa12.31□□□□□ -0.44
TMEM88-201ENST00000301599 FMC1Q96HJ9 113 aa12.31□□□□□ -0.44
TMEM88-201ENST00000301599 GTSF1LQ9H1H1 148 aa12.31□□□□□ -0.44
TMEM88-201ENST00000301599 TRGC1P0CF51 173 aa12.3□□□□□ -0.44
TMEM88-201ENST00000301599 COA6Q5JTJ3 125 aaKnown RBP12.3□□□□□ -0.44
TMEM88-201ENST00000301599 LELP1Q5T871 98 aa12.3□□□□□ -0.44
TMEM88-201ENST00000301599 OCC1Q8TAD7 63 aa12.3□□□□□ -0.44
TMEM88-201ENST00000301599 ZC2HC1AQ96GY0 325 aa12.3□□□□□ -0.44
TMEM88-201ENST00000301599 TRBV6-1A0A0K0K1D8 114 aa12.29□□□□□ -0.44
TMEM88-201ENST00000301599 IBA57-AS1B1ANH7 110 aa12.29□□□□□ -0.44
TMEM88-201ENST00000301599 MT-ND6P03923 174 aa12.29□□□□□ -0.44
TMEM88-201ENST00000301599 FAM162BQ5T6X4 162 aa12.29□□□□□ -0.44
TMEM88-201ENST00000301599 WDR73Q6P4I2 378 aa12.29□□□□□ -0.44
TMEM88-201ENST00000301599 Q6ZSN1 163 aa12.29□□□□□ -0.44
TMEM88-201ENST00000301599 SYT8Q8NBV8 401 aa12.29□□□□□ -0.44
TMEM88-201ENST00000301599 SCRT2Q9NQ03 307 aa12.29□□□□□ -0.44
TMEM88-201ENST00000301599 ABCA13Q86UQ4 5058 aa12.29□□□□□ -0.44
TMEM88-201ENST00000301599 SH2D1AO60880 128 aa12.28□□□□□ -0.44
TMEM88-201ENST00000301599 ARMS2P0C7Q2 107 aa12.28□□□□□ -0.44
TMEM88-201ENST00000301599 DMRTA1Q5VZB9 504 aa12.28□□□□□ -0.44
TMEM88-201ENST00000301599 FRZBQ92765 325 aa12.28□□□□□ -0.44
TMEM88-201ENST00000301599 DERL1Q9BUN8 251 aa12.28□□□□□ -0.44
TMEM88-201ENST00000301599 PSCAO43653 123 aa12.27□□□□□ -0.45
TMEM88-201ENST00000301599 FUSP35637 526 aaKnown RBP eCLIP12.27□□□□□ -0.45
TMEM88-201ENST00000301599 CENPWQ5EE01 88 aa12.27□□□□□ -0.45
TMEM88-201ENST00000301599 FAM231DQ6ZW35 169 aa12.27□□□□□ -0.45
TMEM88-201ENST00000301599 JPT2Q9H910 190 aa12.27□□□□□ -0.45
TMEM88-201ENST00000301599 TRBV20OR9-2A0A075B6H5 130 aa12.26□□□□□ -0.45
TMEM88-201ENST00000301599 GRIFINA4D1Z8 144 aa12.26□□□□□ -0.45
TMEM88-201ENST00000301599 GAGE12JA6NER3 117 aa12.26□□□□□ -0.45
TMEM88-201ENST00000301599 H3BVH4 76 aa12.26□□□□□ -0.45
TMEM88-201ENST00000301599 PHOX2AO14813 284 aa12.26□□□□□ -0.45
TMEM88-201ENST00000301599 LTAP01374 205 aa12.26□□□□□ -0.45
TMEM88-201ENST00000301599 GAGE1Q13065 139 aa12.26□□□□□ -0.45
TMEM88-201ENST00000301599 GAGE4Q13068 117 aa12.26□□□□□ -0.45
TMEM88-201ENST00000301599 GAGE5Q13069 117 aa12.26□□□□□ -0.45
TMEM88-201ENST00000301599 GAGE13Q4V321 117 aa12.26□□□□□ -0.45
TMEM88-201ENST00000301599 RASL11AQ6T310 242 aa12.26□□□□□ -0.45
TMEM88-201ENST00000301599 TRAPPC1Q9Y5R8 145 aa12.26□□□□□ -0.45
TMEM88-201ENST00000301599 APOBP04114 4563 aaKnown RBP12.26□□□□□ -0.45
TMEM88-201ENST00000301599 IGHV3-30P01768 117 aa12.25□□□□□ -0.45
TMEM88-201ENST00000301599 IGHV3-33P01772 117 aa12.25□□□□□ -0.45
TMEM88-201ENST00000301599 IGHV3-30-3P0DP02 117 aa12.25□□□□□ -0.45
TMEM88-201ENST00000301599 IGHV3-30-5P0DP03 117 aa12.25□□□□□ -0.45
TMEM88-201ENST00000301599 UFSP1Q6NVU6 142 aa12.25□□□□□ -0.45
TMEM88-201ENST00000301599 SAMD10Q9BYL1 202 aa12.25□□□□□ -0.45
TMEM88-201ENST00000301599 PHLDA3Q9Y5J5 127 aa12.25□□□□□ -0.45
TMEM88-201ENST00000301599 RHODO00212 210 aa12.24□□□□□ -0.45
TMEM88-201ENST00000301599 LINC01559Q495D7 138 aa12.24□□□□□ -0.45
TMEM88-201ENST00000301599 HIST3H2BBQ8N257 126 aa12.24□□□□□ -0.45
TMEM88-201ENST00000301599 TMSB15BA0A087X1C1 80 aa12.23□□□□□ -0.45
TMEM88-201ENST00000301599 TMEM18Q96B42 140 aa12.23□□□□□ -0.45
TMEM88-201ENST00000301599 GNB1LQ9BYB4 327 aa12.23□□□□□ -0.45
TMEM88-201ENST00000301599 Q9HAA7 133 aa12.23□□□□□ -0.45
TMEM88-201ENST00000301599 XKRY2A2RUG3 117 aa12.22□□□□□ -0.45
TMEM88-201ENST00000301599 LINC00694P0DN24 101 aa12.22□□□□□ -0.45
TMEM88-201ENST00000301599 GCSHP23434 173 aa12.22□□□□□ -0.45
TMEM88-201ENST00000301599 BAGE2Q86Y30 109 aa12.22□□□□□ -0.45
TMEM88-201ENST00000301599 C14orf178Q8N769 122 aaPredicted RBP12.22□□□□□ -0.45
TMEM88-201ENST00000301599 Q9UF83 564 aa12.22□□□□□ -0.45
TMEM88-201ENST00000301599 V9GYV3 84 aa12.22□□□□□ -0.45
TMEM88-201ENST00000301599 LRCOL1A6NCL2 159 aa12.21□□□□□ -0.45
TMEM88-201ENST00000301599 K7EN84 100 aa12.21□□□□□ -0.45
TMEM88-201ENST00000301599 KRTAP10-1P60331 282 aa12.21□□□□□ -0.45
TMEM88-201ENST00000301599 LAGE3Q14657 143 aa12.21□□□□□ -0.45
TMEM88-201ENST00000301599 FAM74A4Q5TZK3 123 aa12.21□□□□□ -0.45
TMEM88-201ENST00000301599 TM2D2Q9BX73 214 aa12.21□□□□□ -0.45
TMEM88-201ENST00000301599 M0R381 172 aa12.2□□□□□ -0.46
TMEM88-201ENST00000301599 XGP55808 180 aa12.2□□□□□ -0.46
TMEM88-201ENST00000301599 CT83Q5H943 113 aa12.2□□□□□ -0.46
TMEM88-201ENST00000301599 NTN5Q8WTR8 489 aaPredicted RBP12.2□□□□□ -0.46
TMEM88-201ENST00000301599 NIT2Q9NQR4 276 aa12.2□□□□□ -0.46
TMEM88-201ENST00000301599 A0A087WWL8 130 aa12.19□□□□□ -0.46
TMEM88-201ENST00000301599 SMIM27A0A1W2PRY6 76 aa12.19□□□□□ -0.46
TMEM88-201ENST00000301599 GATCO43716 136 aaKnown RBP12.19□□□□□ -0.46
TMEM88-201ENST00000301599 HLA-DQA1P01909 254 aa12.19□□□□□ -0.46
TMEM88-201ENST00000301599 IGLV5-52A0A0A0MRZ9 124 aa12.18□□□□□ -0.46
TMEM88-201ENST00000301599 TRAV8-3A0A0A6YYJ7 113 aa12.18□□□□□ -0.46
TMEM88-201ENST00000301599 FAM231BA6NCW3 169 aa12.18□□□□□ -0.46
TMEM88-201ENST00000301599 ATP5L2Q7Z4Y8 100 aa12.18□□□□□ -0.46
TMEM88-201ENST00000301599 OR10D4PQ8NGN7 298 aa12.18□□□□□ -0.46
TMEM88-201ENST00000301599 PACRGQ96M98 296 aaPredicted RBP12.18□□□□□ -0.46
TMEM88-201ENST00000301599 MLST8Q9BVC4 326 aa12.18□□□□□ -0.46
TMEM88-201ENST00000301599 EPM2AB3EWF7 344 aa12.17□□□□□ -0.46
TMEM88-201ENST00000301599 DAZAP1Q96EP5 407 aaKnown RBP12.17□□□□□ -0.46
TMEM88-201ENST00000301599 NAT8BQ9UHF3 227 aa12.17□□□□□ -0.46
TMEM88-201ENST00000301599 TRBV10-1A0A0K0K1A3 114 aa12.16□□□□□ -0.46
TMEM88-201ENST00000301599 A8MWL6 223 aa12.16□□□□□ -0.46
TMEM88-201ENST00000301599 IGLV2-8P01709 118 aa12.16□□□□□ -0.46
TMEM88-201ENST00000301599 FABP4P15090 132 aa12.16□□□□□ -0.46
TMEM88-201ENST00000301599 DAZ4Q86SG3 579 aaKnown RBP12.16□□□□□ -0.46
TMEM88-201ENST00000301599 Q8N814 137 aa12.16□□□□□ -0.46
TMEM88-201ENST00000301599 GFRA4Q9GZZ7 299 aa12.16□□□□□ -0.46
TMEM88-201ENST00000301599 DAZ3Q9NR90 486 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms