RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 A8MZ25 164 aa10.02□□□□□ -0.81
TNFRSF21-201ENST00000296861 RNASE3P12724 160 aaKnown RBP10.02□□□□□ -0.81
TNFRSF21-201ENST00000296861 SNRPD3P62318 126 aaKnown RBP10.02□□□□□ -0.81
TNFRSF21-201ENST00000296861 SCGB1A1P11684 91 aa10.01□□□□□ -0.81
TNFRSF21-201ENST00000296861 PIMREGQ9BSJ6 248 aa10.01□□□□□ -0.81
TNFRSF21-201ENST00000296861 C1QTNF4Q9BXJ3 329 aa10.01□□□□□ -0.81
TNFRSF21-201ENST00000296861 PROK1P58294 105 aa10.01□□□□□ -0.81
TNFRSF21-201ENST00000296861 TRAV8-3A0A0A6YYJ7 113 aa10.01□□□□□ -0.81
TNFRSF21-201ENST00000296861 C11orf71Q6IPW1 123 aa10.01□□□□□ -0.81
TNFRSF21-201ENST00000296861 ANAPC13Q9BS18 74 aa10.01□□□□□ -0.81
TNFRSF21-201ENST00000296861 TCL1BO95988 128 aa10□□□□□ -0.81
TNFRSF21-201ENST00000296861 GATA3P23771 443 aa10□□□□□ -0.81
TNFRSF21-201ENST00000296861 MORN3Q6PF18 240 aaPredicted RBP10□□□□□ -0.81
TNFRSF21-201ENST00000296861 Q8N1Y9 231 aa10□□□□□ -0.81
TNFRSF21-201ENST00000296861 ERG28Q9UKR5 140 aa10□□□□□ -0.81
TNFRSF21-201ENST00000296861 MUC4Q99102 2169 aa10□□□□□ -0.81
TNFRSF21-201ENST00000296861 IGHV4-59P01825 116 aa10□□□□□ -0.81
TNFRSF21-201ENST00000296861 NDUFA4O00483 81 aa10□□□□□ -0.81
TNFRSF21-201ENST00000296861 IGHV3-53P01767 116 aa10□□□□□ -0.81
TNFRSF21-201ENST00000296861 EBI3Q14213 229 aa10□□□□□ -0.81
TNFRSF21-201ENST00000296861 TSPEAR-AS2P59090 65 aa9.99□□□□□ -0.81
TNFRSF21-201ENST00000296861 ITLN2Q8WWU7 325 aaPredicted RBP9.99□□□□□ -0.81
TNFRSF21-201ENST00000296861 SPATA25Q9BR10 227 aa9.99□□□□□ -0.81
TNFRSF21-201ENST00000296861 IGHV4-30-2A0A087WSY4 118 aa9.99□□□□□ -0.81
TNFRSF21-201ENST00000296861 FAM223BA6NKX1 122 aa9.99□□□□□ -0.81
TNFRSF21-201ENST00000296861 FAM223AQ8IWN6 122 aa9.99□□□□□ -0.81
TNFRSF21-201ENST00000296861 TNFRSF18Q9Y5U5 241 aa9.99□□□□□ -0.81
TNFRSF21-201ENST00000296861 TRBV20-1A0A075B6N2 111 aa9.99□□□□□ -0.81
TNFRSF21-201ENST00000296861 SMIM20Q8N5G0 67 aa9.99□□□□□ -0.81
TNFRSF21-201ENST00000296861 PPDPFLQ8WWR9 84 aa9.99□□□□□ -0.81
TNFRSF21-201ENST00000296861 A0A1W2PRX2 142 aa9.98□□□□□ -0.81
TNFRSF21-201ENST00000296861 COX8CQ7Z4L0 72 aa9.98□□□□□ -0.81
TNFRSF21-201ENST00000296861 NFE4Q86UQ8 179 aa9.98□□□□□ -0.81
TNFRSF21-201ENST00000296861 GPHB5Q86YW7 130 aa9.98□□□□□ -0.81
TNFRSF21-201ENST00000296861 TEX29Q8N6K0 151 aa9.98□□□□□ -0.81
TNFRSF21-201ENST00000296861 PRO1854Q9UHT4 67 aa9.98□□□□□ -0.81
TNFRSF21-201ENST00000296861 TRAV12-1A0A0B4J245 112 aa9.98□□□□□ -0.81
TNFRSF21-201ENST00000296861 DEFB131AP59861 70 aa9.98□□□□□ -0.81
TNFRSF21-201ENST00000296861 MUSTN1Q8IVN3 82 aa9.98□□□□□ -0.81
TNFRSF21-201ENST00000296861 NTN5Q8WTR8 489 aaPredicted RBP9.98□□□□□ -0.81
TNFRSF21-201ENST00000296861 DOPEY1Q5JWR5 2465 aa9.97□□□□□ -0.81
TNFRSF21-201ENST00000296861 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.97□□□□□ -0.81
TNFRSF21-201ENST00000296861 IGKV2-29A2NJV5 120 aaPredicted RBP9.97□□□□□ -0.81
TNFRSF21-201ENST00000296861 PPP1R17O96001 155 aa9.97□□□□□ -0.81
TNFRSF21-201ENST00000296861 SRSF2Q01130 221 aaKnown RBP9.97□□□□□ -0.81
TNFRSF21-201ENST00000296861 ZNRF2Q8NHG8 242 aa9.97□□□□□ -0.81
TNFRSF21-201ENST00000296861 ANKRD29Q8N6D5 301 aa9.97□□□□□ -0.81
TNFRSF21-201ENST00000296861 UBE2E2Q96LR5 201 aa9.97□□□□□ -0.81
TNFRSF21-201ENST00000296861 A0A0J9YY99 117 aa9.96□□□□□ -0.81
TNFRSF21-201ENST00000296861 XGP55808 180 aa9.96□□□□□ -0.81
TNFRSF21-201ENST00000296861 Q6ZSV7 163 aa9.96□□□□□ -0.81
TNFRSF21-201ENST00000296861 NDUFA11Q86Y39 141 aa9.96□□□□□ -0.81
TNFRSF21-201ENST00000296861 CRIP2P52943 208 aaPredicted RBP9.96□□□□□ -0.81
TNFRSF21-201ENST00000296861 CFAP126Q5VTH2 177 aa9.96□□□□□ -0.81
TNFRSF21-201ENST00000296861 SLC25A20O43772 301 aa9.96□□□□□ -0.82
TNFRSF21-201ENST00000296861 CFC1BP0CG36 223 aa9.95□□□□□ -0.82
TNFRSF21-201ENST00000296861 CFC1P0CG37 223 aa9.95□□□□□ -0.82
TNFRSF21-201ENST00000296861 ZFAND6Q6FIF0 208 aa9.95□□□□□ -0.82
TNFRSF21-201ENST00000296861 Q6ZUT4 128 aa9.95□□□□□ -0.82
TNFRSF21-201ENST00000296861 RNF183Q96D59 192 aa9.95□□□□□ -0.82
TNFRSF21-201ENST00000296861 LINC01587Q99440 93 aa9.95□□□□□ -0.82
TNFRSF21-201ENST00000296861 PRO0461Q9UI25 63 aa9.95□□□□□ -0.82
TNFRSF21-201ENST00000296861 PRB1P04280 392 aa9.95□□□□□ -0.82
TNFRSF21-201ENST00000296861 TEN1Q86WV5 123 aa9.95□□□□□ -0.82
TNFRSF21-201ENST00000296861 SNCGO76070 127 aa9.95□□□□□ -0.82
TNFRSF21-201ENST00000296861 SMCPP49901 116 aaPredicted RBP9.95□□□□□ -0.82
TNFRSF21-201ENST00000296861 C3orf56Q8N813 242 aa9.95□□□□□ -0.82
TNFRSF21-201ENST00000296861 CRYGDP07320 174 aa9.94□□□□□ -0.82
TNFRSF21-201ENST00000296861 FBXL19-AS1Q494R0 122 aa9.94□□□□□ -0.82
TNFRSF21-201ENST00000296861 TTC32Q5I0X7 151 aa9.94□□□□□ -0.82
TNFRSF21-201ENST00000296861 PAPPA-AS1Q5QFB9 102 aa9.94□□□□□ -0.82
TNFRSF21-201ENST00000296861 CHD6Q8TD26 2715 aa9.94□□□□□ -0.82
TNFRSF21-201ENST00000296861 TSHBP01222 138 aa9.94□□□□□ -0.82
TNFRSF21-201ENST00000296861 USMG5Q96IX5 58 aa9.94□□□□□ -0.82
TNFRSF21-201ENST00000296861 IGHV1OR15-1A0A075B7D0 117 aa9.94□□□□□ -0.82
TNFRSF21-201ENST00000296861 MRPL53Q96EL3 112 aaKnown RBP9.94□□□□□ -0.82
TNFRSF21-201ENST00000296861 TIMM21Q9BVV7 248 aa9.94□□□□□ -0.82
TNFRSF21-201ENST00000296861 C10orf126Q8N4M7 172 aa9.93□□□□□ -0.82
TNFRSF21-201ENST00000296861 PSMG3-AS1Q96PY0 264 aa9.93□□□□□ -0.82
TNFRSF21-201ENST00000296861 TRAV13-1A0A0B4J241 112 aa9.93□□□□□ -0.82
TNFRSF21-201ENST00000296861 AVPP01185 164 aa9.93□□□□□ -0.82
TNFRSF21-201ENST00000296861 DEFB112Q30KQ8 113 aa9.93□□□□□ -0.82
TNFRSF21-201ENST00000296861 APRG1Q8IVJ8 170 aa9.93□□□□□ -0.82
TNFRSF21-201ENST00000296861 DYNLRB2Q8TF09 96 aa9.93□□□□□ -0.82
TNFRSF21-201ENST00000296861 Q9UF83 564 aa9.93□□□□□ -0.82
TNFRSF21-201ENST00000296861 B5MCH6 92 aa9.93□□□□□ -0.82
TNFRSF21-201ENST00000296861 GAGE2BQ13066 116 aa9.93□□□□□ -0.82
TNFRSF21-201ENST00000296861 GAGE2EQ4V326 116 aa9.93□□□□□ -0.82
TNFRSF21-201ENST00000296861 GAGE2DQ9UEU5 116 aa9.93□□□□□ -0.82
TNFRSF21-201ENST00000296861 FBN2P35556 2912 aa9.92□□□□□ -0.82
TNFRSF21-201ENST00000296861 TOMM7Q9P0U1 55 aa9.92□□□□□ -0.82
TNFRSF21-201ENST00000296861 XCL2Q9UBD3 114 aa9.92□□□□□ -0.82
TNFRSF21-201ENST00000296861 MSMBP08118 114 aa9.92□□□□□ -0.82
TNFRSF21-201ENST00000296861 MEIG1Q5JSS6 88 aa9.92□□□□□ -0.82
TNFRSF21-201ENST00000296861 BRI3O95415 125 aa9.91□□□□□ -0.82
TNFRSF21-201ENST00000296861 CDIP1Q9H305 208 aa9.91□□□□□ -0.82
TNFRSF21-201ENST00000296861 IGLV4-69A0A075B6H9 119 aa9.91□□□□□ -0.82
TNFRSF21-201ENST00000296861 LINC01546A6NGU7 62 aa9.91□□□□□ -0.82
TNFRSF21-201ENST00000296861 CLEC2BQ92478 149 aa9.91□□□□□ -0.82
TNFRSF21-201ENST00000296861 LENEPQ9Y5L5 61 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms