RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 FAM231CP0DMU5 169 aa12.46□□□□□ -0.42
CHRNE-201ENST00000293780 SNRPD3P62318 126 aaKnown RBP12.46□□□□□ -0.42
CHRNE-201ENST00000293780 ARL17AQ8IVW1 177 aa12.46□□□□□ -0.42
CHRNE-201ENST00000293780 C1QTNF4Q9BXJ3 329 aa12.46□□□□□ -0.42
CHRNE-201ENST00000293780 SYT8Q8NBV8 401 aa12.45□□□□□ -0.42
CHRNE-201ENST00000293780 ZNF580Q9UK33 172 aa12.45□□□□□ -0.42
CHRNE-201ENST00000293780 PSMB2P49721 201 aa12.45□□□□□ -0.42
CHRNE-201ENST00000293780 SMCPP49901 116 aaPredicted RBP12.45□□□□□ -0.42
CHRNE-201ENST00000293780 CFAP126Q5VTH2 177 aa12.45□□□□□ -0.42
CHRNE-201ENST00000293780 MAPK1IP1LQ8NDC0 245 aa12.45□□□□□ -0.42
CHRNE-201ENST00000293780 AMELXQ99217 191 aa12.45□□□□□ -0.42
CHRNE-201ENST00000293780 USP9YO00507 2555 aaPredicted RBP12.44□□□□□ -0.42
CHRNE-201ENST00000293780 DLX4Q92988 240 aaPredicted RBP12.44□□□□□ -0.42
CHRNE-201ENST00000293780 CREBBPQ92793 2442 aa12.44□□□□□ -0.42
CHRNE-201ENST00000293780 IGHV3-30P01768 117 aa12.44□□□□□ -0.42
CHRNE-201ENST00000293780 IGHV3-30-5P0DP03 117 aa12.44□□□□□ -0.42
CHRNE-201ENST00000293780 NDUFA11Q86Y39 141 aa12.44□□□□□ -0.42
CHRNE-201ENST00000293780 ODF3Q96PU9 254 aa12.44□□□□□ -0.42
CHRNE-201ENST00000293780 CDIP1Q9H305 208 aa12.43□□□□□ -0.42
CHRNE-201ENST00000293780 IGHV3-64A0A075B6Q5 118 aa12.43□□□□□ -0.42
CHRNE-201ENST00000293780 TRAV26-1A0A087WT03 109 aa12.43□□□□□ -0.42
CHRNE-201ENST00000293780 J3QQQ9 107 aa12.43□□□□□ -0.42
CHRNE-201ENST00000293780 CFC1BP0CG36 223 aa12.43□□□□□ -0.42
CHRNE-201ENST00000293780 CFC1P0CG37 223 aa12.43□□□□□ -0.42
CHRNE-201ENST00000293780 NFE4Q86UQ8 179 aa12.43□□□□□ -0.42
CHRNE-201ENST00000293780 SLC25A29Q8N8R3 303 aa12.43□□□□□ -0.42
CHRNE-201ENST00000293780 MYO18BQ8IUG5 2567 aa12.42□□□□□ -0.42
CHRNE-201ENST00000293780 ATP6V0E2Q8NHE4 81 aa12.42□□□□□ -0.42
CHRNE-201ENST00000293780 DOPEY1Q5JWR5 2465 aa12.42□□□□□ -0.42
CHRNE-201ENST00000293780 HTN1P15515 57 aa12.42□□□□□ -0.42
CHRNE-201ENST00000293780 NSUN5P1Q3KNT7 163 aa12.42□□□□□ -0.42
CHRNE-201ENST00000293780 TRPT1Q86TN4 253 aaKnown RBP12.42□□□□□ -0.42
CHRNE-201ENST00000293780 GEMIN7Q9H840 131 aaKnown RBP12.42□□□□□ -0.42
CHRNE-201ENST00000293780 IGHV3-73A0A0B4J1V6 119 aa12.41□□□□□ -0.42
CHRNE-201ENST00000293780 PRM2P04554 102 aa12.41□□□□□ -0.42
CHRNE-201ENST00000293780 RBMY1A1P0DJD3 496 aaKnown RBP12.41□□□□□ -0.42
CHRNE-201ENST00000293780 RBMY1CP0DJD4 496 aa12.41□□□□□ -0.42
CHRNE-201ENST00000293780 UBE2D3P61077 147 aa12.41□□□□□ -0.42
CHRNE-201ENST00000293780 UBE2D2P62837 147 aa12.41□□□□□ -0.42
CHRNE-201ENST00000293780 RBMY1FQ15415 496 aaKnown RBP12.41□□□□□ -0.42
CHRNE-201ENST00000293780 ZNF418Q8TF45 676 aaPredicted RBP12.4□□□□□ -0.42
CHRNE-201ENST00000293780 SPINK8P0C7L1 97 aa12.4□□□□□ -0.42
CHRNE-201ENST00000293780 LGALS3P17931 250 aaKnown RBP12.4□□□□□ -0.42
CHRNE-201ENST00000293780 RHOHQ15669 191 aa12.4□□□□□ -0.42
CHRNE-201ENST00000293780 C20orf203Q8NBC4 194 aa12.4□□□□□ -0.42
CHRNE-201ENST00000293780 POLQO75417 2590 aa12.4□□□□□ -0.42
CHRNE-201ENST00000293780 PROK1P58294 105 aa12.39□□□□□ -0.43
CHRNE-201ENST00000293780 FHL3Q13643 280 aa12.39□□□□□ -0.43
CHRNE-201ENST00000293780 PTH2Q96A98 100 aa12.39□□□□□ -0.43
CHRNE-201ENST00000293780 MXRA5Q9NR99 2828 aa12.39□□□□□ -0.43
CHRNE-201ENST00000293780 TMEM223A0PJW6 202 aa12.39□□□□□ -0.43
CHRNE-201ENST00000293780 MT-ATP8P03928 68 aa12.39□□□□□ -0.43
CHRNE-201ENST00000293780 HOXD3P31249 432 aaPredicted RBP12.39□□□□□ -0.43
CHRNE-201ENST00000293780 CRYBA4P53673 196 aa12.39□□□□□ -0.43
CHRNE-201ENST00000293780 SVIPQ8NHG7 77 aa12.39□□□□□ -0.43
CHRNE-201ENST00000293780 A0A0J9YXV3 536 aa12.38□□□□□ -0.43
CHRNE-201ENST00000293780 KNCNA6PVL3 124 aa12.38□□□□□ -0.43
CHRNE-201ENST00000293780 I3L3M4 83 aa12.38□□□□□ -0.43
CHRNE-201ENST00000293780 TCL1BO95988 128 aa12.38□□□□□ -0.43
CHRNE-201ENST00000293780 TGFAP01135 160 aa12.38□□□□□ -0.43
CHRNE-201ENST00000293780 ZNF22P17026 224 aaPredicted RBP12.37□□□□□ -0.43
CHRNE-201ENST00000293780 IGLV4-3A0A075B6K6 122 aa12.37□□□□□ -0.43
CHRNE-201ENST00000293780 GATA3P23771 443 aa12.37□□□□□ -0.43
CHRNE-201ENST00000293780 C18orf65Q6ZTR6 163 aa12.37□□□□□ -0.43
CHRNE-201ENST00000293780 LINC01356Q8N9X3 169 aa12.37□□□□□ -0.43
CHRNE-201ENST00000293780 LEPROTO15243 131 aa12.36□□□□□ -0.43
CHRNE-201ENST00000293780 EIF4EBP3O60516 100 aaPredicted RBP12.36□□□□□ -0.43
CHRNE-201ENST00000293780 Q6ZUT4 128 aa12.36□□□□□ -0.43
CHRNE-201ENST00000293780 Q9UF83 564 aa12.36□□□□□ -0.43
CHRNE-201ENST00000293780 TMEM89A2RUT3 159 aa12.36□□□□□ -0.43
CHRNE-201ENST00000293780 RHODO00212 210 aa12.36□□□□□ -0.43
CHRNE-201ENST00000293780 XGP55808 180 aa12.36□□□□□ -0.43
CHRNE-201ENST00000293780 DEFB136Q30KP8 78 aa12.36□□□□□ -0.43
CHRNE-201ENST00000293780 C10orf126Q8N4M7 172 aa12.36□□□□□ -0.43
CHRNE-201ENST00000293780 CHD6Q8TD26 2715 aa12.36□□□□□ -0.43
CHRNE-201ENST00000293780 CEMP1Q6PRD7 247 aaPredicted RBP12.35□□□□□ -0.43
CHRNE-201ENST00000293780 CARD19Q96LW7 228 aa12.35□□□□□ -0.43
CHRNE-201ENST00000293780 VCX2Q9H322 139 aa12.35□□□□□ -0.43
CHRNE-201ENST00000293780 FBN2P35556 2912 aa12.35□□□□□ -0.43
CHRNE-201ENST00000293780 CENPEQ02224 2701 aa12.35□□□□□ -0.43
CHRNE-201ENST00000293780 UBR5O95071 2799 aaPredicted RBP12.35□□□□□ -0.43
CHRNE-201ENST00000293780 A4D1N5 150 aa12.35□□□□□ -0.43
CHRNE-201ENST00000293780 AKAP9Q99996 3911 aa12.35□□□□□ -0.43
CHRNE-201ENST00000293780 ANKRD17O75179 2603 aaKnown RBP12.35□□□□□ -0.43
CHRNE-201ENST00000293780 KMT2BQ9UMN6 2715 aaPredicted RBP12.34□□□□□ -0.43
CHRNE-201ENST00000293780 TRGV11A0A075B6L2 103 aa12.34□□□□□ -0.43
CHRNE-201ENST00000293780 TRAV2A0A0B4J234 112 aa12.34□□□□□ -0.43
CHRNE-201ENST00000293780 SLURP1P55000 103 aa12.34□□□□□ -0.43
CHRNE-201ENST00000293780 PPDPFLQ8WWR9 84 aa12.34□□□□□ -0.43
CHRNE-201ENST00000293780 FAM104AQ969W3 186 aa12.34□□□□□ -0.43
CHRNE-201ENST00000293780 RAX2Q96IS3 184 aa12.34□□□□□ -0.43
CHRNE-201ENST00000293780 PRO1854Q9UHT4 67 aa12.34□□□□□ -0.43
CHRNE-201ENST00000293780 RNASE13Q5GAN3 156 aaKnown RBP12.34□□□□□ -0.43
CHRNE-201ENST00000293780 ZNF702PQ9H963 129 aa12.34□□□□□ -0.43
CHRNE-201ENST00000293780 A0A096LNT2 108 aa12.33□□□□□ -0.44
CHRNE-201ENST00000293780 ADARB2-AS1A8MUL3 147 aa12.33□□□□□ -0.44
CHRNE-201ENST00000293780 SCGB1C2P0DMR2 95 aa12.33□□□□□ -0.44
CHRNE-201ENST00000293780 DEFB131AP59861 70 aa12.33□□□□□ -0.44
CHRNE-201ENST00000293780 TEN1Q86WV5 123 aa12.33□□□□□ -0.44
CHRNE-201ENST00000293780 MUSTN1Q8IVN3 82 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms