RNA–Protein interactions for RNA: ENST00000282701.2

BMP3-201, Transcript of bone morphogenetic protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BMP3, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3-201ENST00000282701 UPK3BQ9BT76 320 aa12.56□□□□□ -0.4
BMP3-201ENST00000282701 TNRC6AQ8NDV7 1962 aaKnown RBP12.56□□□□□ -0.4
BMP3-201ENST00000282701 ZFP36P26651 326 aaKnown RBP12.56□□□□□ -0.4
BMP3-201ENST00000282701 TMEM263Q8WUH6 116 aaKnown RBP12.56□□□□□ -0.4
BMP3-201ENST00000282701 CEMP1Q6PRD7 247 aaPredicted RBP12.55□□□□□ -0.4
BMP3-201ENST00000282701 A0A0J9YXY3 114 aa12.55□□□□□ -0.4
BMP3-201ENST00000282701 SVIPQ8NHG7 77 aa12.55□□□□□ -0.4
BMP3-201ENST00000282701 TM2D2Q9BX73 214 aa12.55□□□□□ -0.4
BMP3-201ENST00000282701 UNQ9165/PRO28630Q6UXU0 137 aa12.55□□□□□ -0.4
BMP3-201ENST00000282701 FAM110AQ9BQ89 295 aa12.55□□□□□ -0.4
BMP3-201ENST00000282701 H0Y9J4 135 aa12.54□□□□□ -0.4
BMP3-201ENST00000282701 TRAV23DV6A0A075B6W5 121 aa12.54□□□□□ -0.4
BMP3-201ENST00000282701 DEFB135Q30KP9 77 aa12.54□□□□□ -0.4
BMP3-201ENST00000282701 IGKV1D-37A0A075B6S9 117 aa12.54□□□□□ -0.4
BMP3-201ENST00000282701 TRBV10-1A0A0K0K1A3 114 aa12.54□□□□□ -0.4
BMP3-201ENST00000282701 RNF183Q96D59 192 aa12.53□□□□□ -0.4
BMP3-201ENST00000282701 DEFB4AO15263 64 aa12.53□□□□□ -0.4
BMP3-201ENST00000282701 MYCNOSP40205 109 aa12.53□□□□□ -0.4
BMP3-201ENST00000282701 HIST2H2BDQ6DRA6 164 aa12.53□□□□□ -0.4
BMP3-201ENST00000282701 FANCD2OSQ96PS1 177 aa12.53□□□□□ -0.4
BMP3-201ENST00000282701 NCKAP5O14513 1909 aa12.53□□□□□ -0.4
BMP3-201ENST00000282701 NDUFV3P56181 108 aaKnown RBP12.53□□□□□ -0.4
BMP3-201ENST00000282701 ZNF80P51504 273 aaPredicted RBP12.52□□□□□ -0.4
BMP3-201ENST00000282701 IGLV2-8P01709 118 aa12.52□□□□□ -0.41
BMP3-201ENST00000282701 SIRPDQ9H106 197 aa12.52□□□□□ -0.41
BMP3-201ENST00000282701 PRO0255Q9UI72 69 aa12.51□□□□□ -0.41
BMP3-201ENST00000282701 SEC61GP60059 68 aa12.51□□□□□ -0.41
BMP3-201ENST00000282701 ADORA2A-AS1P86434 159 aa12.51□□□□□ -0.41
BMP3-201ENST00000282701 BPY2O14599 106 aa12.51□□□□□ -0.41
BMP3-201ENST00000282701 P0C879 139 aa12.51□□□□□ -0.41
BMP3-201ENST00000282701 C4orf48Q5BLP8 95 aa12.51□□□□□ -0.41
BMP3-201ENST00000282701 MT-ATP8P03928 68 aa12.5□□□□□ -0.41
BMP3-201ENST00000282701 GDF5OSQ5U4N7 250 aa12.5□□□□□ -0.41
BMP3-201ENST00000282701 IGF2-ASQ6U949 168 aa12.5□□□□□ -0.41
BMP3-201ENST00000282701 LINC00322Q6ZN03 302 aaPredicted RBP12.5□□□□□ -0.41
BMP3-201ENST00000282701 TNRC6BQ9UPQ9 1833 aaKnown RBP12.5□□□□□ -0.41
BMP3-201ENST00000282701 MALRD1Q5VYJ5 2156 aa12.5□□□□□ -0.41
BMP3-201ENST00000282701 MAP6D1Q9H9H5 199 aa12.49□□□□□ -0.41
BMP3-201ENST00000282701 TEX49A0A1B0GTD5 131 aa12.49□□□□□ -0.41
BMP3-201ENST00000282701 ZFAND2AQ8N6M9 145 aa12.49□□□□□ -0.41
BMP3-201ENST00000282701 P0DMU3 169 aa12.49□□□□□ -0.41
BMP3-201ENST00000282701 FAM231AP0DMU4 169 aa12.49□□□□□ -0.41
BMP3-201ENST00000282701 FAM231CP0DMU5 169 aa12.49□□□□□ -0.41
BMP3-201ENST00000282701 B9D2Q9BPU9 175 aa12.49□□□□□ -0.41
BMP3-201ENST00000282701 UQCRQO14949 82 aa12.48□□□□□ -0.41
BMP3-201ENST00000282701 IGLC6P0CF74 106 aa12.48□□□□□ -0.41
BMP3-201ENST00000282701 NEXN-AS1Q8NBZ9 246 aa12.48□□□□□ -0.41
BMP3-201ENST00000282701 CHD3Q12873 2000 aaKnown RBP12.48□□□□□ -0.41
BMP3-201ENST00000282701 SDIM1Q6ZPB5 146 aa12.48□□□□□ -0.41
BMP3-201ENST00000282701 CCDC140Q96MF4 163 aa12.48□□□□□ -0.41
BMP3-201ENST00000282701 SPANXB1Q9NS25 103 aaPredicted RBP12.48□□□□□ -0.41
BMP3-201ENST00000282701 TP53TG3Q9ULZ0 132 aa12.48□□□□□ -0.41
BMP3-201ENST00000282701 UFSP1Q6NVU6 142 aa12.48□□□□□ -0.41
BMP3-201ENST00000282701 A6NDX4 124 aa12.47□□□□□ -0.41
BMP3-201ENST00000282701 CREBBPQ92793 2442 aa12.47□□□□□ -0.41
BMP3-201ENST00000282701 DAZAP2Q15038 168 aaPredicted RBP12.47□□□□□ -0.41
BMP3-201ENST00000282701 FRMPD3Q5JV73 1810 aa12.47□□□□□ -0.41
BMP3-201ENST00000282701 ANAPC1Q9H1A4 1944 aa12.47□□□□□ -0.41
BMP3-201ENST00000282701 IGKV4-1P06312 121 aa12.46□□□□□ -0.41
BMP3-201ENST00000282701 NRGNQ92686 78 aa12.46□□□□□ -0.41
BMP3-201ENST00000282701 C20orf197Q8N268 126 aa12.46□□□□□ -0.41
BMP3-201ENST00000282701 ODF3Q96PU9 254 aa12.46□□□□□ -0.42
BMP3-201ENST00000282701 NOTCH3Q9UM47 2321 aa12.45□□□□□ -0.42
BMP3-201ENST00000282701 WFDC11Q8NEX6 87 aa12.45□□□□□ -0.42
BMP3-201ENST00000282701 FAM236DA0A1B0GTK5 79 aa12.45□□□□□ -0.42
BMP3-201ENST00000282701 FAM236CP0DP71 79 aa12.45□□□□□ -0.42
BMP3-201ENST00000282701 PCNX1Q96RV3 2341 aa12.45□□□□□ -0.42
BMP3-201ENST00000282701 TANC1Q9C0D5 1861 aa12.45□□□□□ -0.42
BMP3-201ENST00000282701 MSMPQ1L6U9 139 aa12.44□□□□□ -0.42
BMP3-201ENST00000282701 TMEM223A0PJW6 202 aa12.44□□□□□ -0.42
BMP3-201ENST00000282701 ATP5EP2Q5VTU8 51 aa12.44□□□□□ -0.42
BMP3-201ENST00000282701 SPTSSBQ8NFR3 76 aa12.44□□□□□ -0.42
BMP3-201ENST00000282701 MLST8Q9BVC4 326 aa12.44□□□□□ -0.42
BMP3-201ENST00000282701 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.44□□□□□ -0.42
BMP3-201ENST00000282701 LINC00269Q8N2A0 174 aa12.44□□□□□ -0.42
BMP3-201ENST00000282701 LINC00467Q9BRT7 94 aa12.44□□□□□ -0.42
BMP3-201ENST00000282701 REG3AQ06141 175 aa12.43□□□□□ -0.42
BMP3-201ENST00000282701 MPLKIPQ8TAP9 179 aa12.43□□□□□ -0.42
BMP3-201ENST00000282701 Q6ZTI0 123 aa12.43□□□□□ -0.42
BMP3-201ENST00000282701 NACAE9PAV3 2078 aa12.43□□□□□ -0.42
BMP3-201ENST00000282701 PLA2G5P39877 138 aa12.42□□□□□ -0.42
BMP3-201ENST00000282701 DYSFO75923 2080 aa12.42□□□□□ -0.42
BMP3-201ENST00000282701 SMAD5-AS1Q9Y6J3 95 aa12.42□□□□□ -0.42
BMP3-201ENST00000282701 C3orf22Q8N5N4 141 aa12.42□□□□□ -0.42
BMP3-201ENST00000282701 ZNF22P17026 224 aaPredicted RBP12.42□□□□□ -0.42
BMP3-201ENST00000282701 ODF3BA8MYP8 253 aa12.41□□□□□ -0.42
BMP3-201ENST00000282701 INSL3P51460 131 aa12.41□□□□□ -0.42
BMP3-201ENST00000282701 TP73-AS1Q9UF72 201 aa12.41□□□□□ -0.42
BMP3-201ENST00000282701 CDKN2A-AS1Q9UH64 79 aa12.41□□□□□ -0.42
BMP3-201ENST00000282701 ENHOQ6UWT2 76 aa12.41□□□□□ -0.42
BMP3-201ENST00000282701 NUP210Q8TEM1 1887 aaPredicted RBP12.41□□□□□ -0.42
BMP3-201ENST00000282701 KLK5Q9Y337 293 aaPredicted RBP12.41□□□□□ -0.42
BMP3-201ENST00000282701 MED13Q9UHV7 2174 aa12.41□□□□□ -0.42
BMP3-201ENST00000282701 H7C423 109 aa12.4□□□□□ -0.42
BMP3-201ENST00000282701 BRWD1-AS2P59051 145 aa12.4□□□□□ -0.42
BMP3-201ENST00000282701 LINC00574Q9H8X3 128 aa12.4□□□□□ -0.42
BMP3-201ENST00000282701 MBD6Q96DN6 1003 aa12.4□□□□□ -0.42
BMP3-201ENST00000282701 IGLV4-3A0A075B6K6 122 aa12.4□□□□□ -0.42
BMP3-201ENST00000282701 LINC00308Q8TCZ7 52 aa12.4□□□□□ -0.42
BMP3-201ENST00000282701 TRIAP1O43715 76 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms