RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 DEFB136Q30KP8 78 aa13.27□□□□□ -0.29
NDFIP1-201ENST00000253814 XCL2Q9UBD3 114 aa13.27□□□□□ -0.29
NDFIP1-201ENST00000253814 MT-ATP8P03928 68 aa13.26□□□□□ -0.29
NDFIP1-201ENST00000253814 TCTEX1D4Q5JR98 221 aa13.26□□□□□ -0.29
NDFIP1-201ENST00000253814 CNFNQ9BYD5 112 aa13.26□□□□□ -0.29
NDFIP1-201ENST00000253814 LMO4P61968 165 aa13.26□□□□□ -0.29
NDFIP1-201ENST00000253814 TRGV2A0A075B6R0 118 aa13.25□□□□□ -0.29
NDFIP1-201ENST00000253814 Q8N6K4 173 aa13.25□□□□□ -0.29
NDFIP1-201ENST00000253814 EBI3Q14213 229 aa13.25□□□□□ -0.29
NDFIP1-201ENST00000253814 H3BMM0 161 aa13.25□□□□□ -0.29
NDFIP1-201ENST00000253814 UBE2WQ96B02 151 aa13.25□□□□□ -0.29
NDFIP1-201ENST00000253814 B5MCH6 92 aa13.24□□□□□ -0.29
NDFIP1-201ENST00000253814 PRIMA1Q86XR5 153 aa13.24□□□□□ -0.29
NDFIP1-201ENST00000253814 YAE1D1Q9NRH1 226 aa13.24□□□□□ -0.29
NDFIP1-201ENST00000253814 TRBV7-9A0A0J9YWB2 115 aa13.24□□□□□ -0.29
NDFIP1-201ENST00000253814 P0DMU3 169 aa13.24□□□□□ -0.29
NDFIP1-201ENST00000253814 FAM231AP0DMU4 169 aa13.24□□□□□ -0.29
NDFIP1-201ENST00000253814 FAM231CP0DMU5 169 aa13.24□□□□□ -0.29
NDFIP1-201ENST00000253814 ASPMQ8IZT6 3477 aa13.24□□□□□ -0.29
NDFIP1-201ENST00000253814 AKAP13Q12802 2813 aa13.23□□□□□ -0.29
NDFIP1-201ENST00000253814 FBXL19-AS1Q494R0 122 aa13.23□□□□□ -0.29
NDFIP1-201ENST00000253814 Q6ZS46 218 aa13.23□□□□□ -0.29
NDFIP1-201ENST00000253814 STHQ8IWL8 128 aa13.23□□□□□ -0.29
NDFIP1-201ENST00000253814 NRGNQ92686 78 aa13.23□□□□□ -0.29
NDFIP1-201ENST00000253814 ZNF415Q09FC8 603 aa13.23□□□□□ -0.29
NDFIP1-201ENST00000253814 TRBV7-3A0A075B6L6 115 aa13.22□□□□□ -0.29
NDFIP1-201ENST00000253814 A0A0J9YY99 117 aa13.22□□□□□ -0.29
NDFIP1-201ENST00000253814 C11orf68Q9H3H3 251 aaKnown RBP13.22□□□□□ -0.29
NDFIP1-201ENST00000253814 IGHV4-30-2A0A087WSY4 118 aa13.22□□□□□ -0.29
NDFIP1-201ENST00000253814 DCHS1Q96JQ0 3298 aa13.22□□□□□ -0.29
NDFIP1-201ENST00000253814 RNASE3P12724 160 aaKnown RBP13.21□□□□□ -0.29
NDFIP1-201ENST00000253814 TMEM101Q96IK0 257 aa13.21□□□□□ -0.29
NDFIP1-201ENST00000253814 SS18L2Q9UHA2 77 aa13.21□□□□□ -0.29
NDFIP1-201ENST00000253814 ZNF292O60281 2723 aa13.21□□□□□ -0.29
NDFIP1-201ENST00000253814 SCGB1A1P11684 91 aa13.21□□□□□ -0.3
NDFIP1-201ENST00000253814 ATMQ13315 3056 aa13.21□□□□□ -0.3
NDFIP1-201ENST00000253814 DEFB112Q30KQ8 113 aa13.2□□□□□ -0.3
NDFIP1-201ENST00000253814 ZNRF2Q8NHG8 242 aa13.2□□□□□ -0.3
NDFIP1-201ENST00000253814 CARD19Q96LW7 228 aa13.2□□□□□ -0.3
NDFIP1-201ENST00000253814 ZMAT4Q9H898 229 aa13.2□□□□□ -0.3
NDFIP1-201ENST00000253814 LEPROTO15243 131 aa13.2□□□□□ -0.3
NDFIP1-201ENST00000253814 C15orf53Q8NAA6 179 aa13.2□□□□□ -0.3
NDFIP1-201ENST00000253814 PRRC2AP48634 2157 aaKnown RBP13.2□□□□□ -0.3
NDFIP1-201ENST00000253814 CFHR3Q02985 330 aa13.2□□□□□ -0.3
NDFIP1-201ENST00000253814 COX6B1P14854 86 aa13.19□□□□□ -0.3
NDFIP1-201ENST00000253814 TIMM17AQ99595 171 aa13.19□□□□□ -0.3
NDFIP1-201ENST00000253814 EDN2P20800 178 aa13.19□□□□□ -0.3
NDFIP1-201ENST00000253814 CRYBA4P53673 196 aa13.19□□□□□ -0.3
NDFIP1-201ENST00000253814 MUC3AQ02505 3323 aa13.19□□□□□ -0.3
NDFIP1-201ENST00000253814 IGLV2-18A0A075B6J9 118 aa13.19□□□□□ -0.3
NDFIP1-201ENST00000253814 C10orf99Q6UWK7 81 aa13.19□□□□□ -0.3
NDFIP1-201ENST00000253814 PEMTQ9UBM1 199 aa13.19□□□□□ -0.3
NDFIP1-201ENST00000253814 Q6ZUT4 128 aa13.18□□□□□ -0.3
NDFIP1-201ENST00000253814 RHOHQ15669 191 aa13.18□□□□□ -0.3
NDFIP1-201ENST00000253814 PIFOQ8TCI5 191 aa13.18□□□□□ -0.3
NDFIP1-201ENST00000253814 HOXD3P31249 432 aaPredicted RBP13.18□□□□□ -0.3
NDFIP1-201ENST00000253814 NBL1P41271 181 aa13.18□□□□□ -0.3
NDFIP1-201ENST00000253814 LINC00158P58513 81 aa13.18□□□□□ -0.3
NDFIP1-201ENST00000253814 LINC01620Q4KN68 170 aa13.18□□□□□ -0.3
NDFIP1-201ENST00000253814 C11orf71Q6IPW1 123 aa13.17□□□□□ -0.3
NDFIP1-201ENST00000253814 GAGE12JA6NER3 117 aa13.17□□□□□ -0.3
NDFIP1-201ENST00000253814 IGHG2P01859 326 aa13.17□□□□□ -0.3
NDFIP1-201ENST00000253814 GAGE4Q13068 117 aa13.17□□□□□ -0.3
NDFIP1-201ENST00000253814 GAGE5Q13069 117 aa13.17□□□□□ -0.3
NDFIP1-201ENST00000253814 MORN3Q6PF18 240 aaPredicted RBP13.17□□□□□ -0.3
NDFIP1-201ENST00000253814 A0A1W2PPR1 153 aa13.17□□□□□ -0.3
NDFIP1-201ENST00000253814 RHODO00212 210 aa13.17□□□□□ -0.3
NDFIP1-201ENST00000253814 APRG1Q8IVJ8 170 aa13.17□□□□□ -0.3
NDFIP1-201ENST00000253814 COPS9Q8WXC6 57 aa13.17□□□□□ -0.3
NDFIP1-201ENST00000253814 PRM2P04554 102 aa13.16□□□□□ -0.3
NDFIP1-201ENST00000253814 RPL36AP83881 106 aaKnown RBP13.16□□□□□ -0.3
NDFIP1-201ENST00000253814 C20orf203Q8NBC4 194 aa13.16□□□□□ -0.3
NDFIP1-201ENST00000253814 CLEC2BQ92478 149 aa13.16□□□□□ -0.3
NDFIP1-201ENST00000253814 RPL36ALQ969Q0 106 aaKnown RBP13.16□□□□□ -0.3
NDFIP1-201ENST00000253814 RNF223E7ERA6 249 aa13.16□□□□□ -0.3
NDFIP1-201ENST00000253814 SLC25A29Q8N8R3 303 aa13.16□□□□□ -0.3
NDFIP1-201ENST00000253814 CHCHD5Q9BSY4 110 aa13.16□□□□□ -0.3
NDFIP1-201ENST00000253814 C19orf84I3L1E1 186 aa13.15□□□□□ -0.3
NDFIP1-201ENST00000253814 IGHV3-30-3P0DP02 117 aa13.15□□□□□ -0.3
NDFIP1-201ENST00000253814 PRSS47A8MTI9 375 aa13.15□□□□□ -0.3
NDFIP1-201ENST00000253814 COX8CQ7Z4L0 72 aa13.15□□□□□ -0.3
NDFIP1-201ENST00000253814 RNF183Q96D59 192 aa13.15□□□□□ -0.3
NDFIP1-201ENST00000253814 A8MZ25 164 aa13.15□□□□□ -0.3
NDFIP1-201ENST00000253814 SLURP1P55000 103 aa13.15□□□□□ -0.3
NDFIP1-201ENST00000253814 CFAP126Q5VTH2 177 aa13.15□□□□□ -0.3
NDFIP1-201ENST00000253814 DMDP11532 3685 aa13.14□□□□□ -0.31
NDFIP1-201ENST00000253814 TRGV4A0A0C4DH28 118 aa13.14□□□□□ -0.31
NDFIP1-201ENST00000253814 PROK1P58294 105 aa13.14□□□□□ -0.31
NDFIP1-201ENST00000253814 C3orf56Q8N813 242 aa13.14□□□□□ -0.31
NDFIP1-201ENST00000253814 RS1O15537 224 aa13.14□□□□□ -0.31
NDFIP1-201ENST00000253814 Q9H8V8 135 aa13.14□□□□□ -0.31
NDFIP1-201ENST00000253814 MED14OSP0DP75 135 aa13.13□□□□□ -0.31
NDFIP1-201ENST00000253814 IFITM1P13164 125 aa13.13□□□□□ -0.31
NDFIP1-201ENST00000253814 HIST2H2BDQ6DRA6 164 aa13.13□□□□□ -0.31
NDFIP1-201ENST00000253814 TEX49A0A1B0GTD5 131 aa13.13□□□□□ -0.31
NDFIP1-201ENST00000253814 H3BUA1 57 aa13.13□□□□□ -0.31
NDFIP1-201ENST00000253814 INSP01308 110 aa13.13□□□□□ -0.31
NDFIP1-201ENST00000253814 RPL35AP18077 110 aaKnown RBP13.13□□□□□ -0.31
NDFIP1-201ENST00000253814 A0A0J9YX75 114 aa13.13□□□□□ -0.31
NDFIP1-201ENST00000253814 LRBAP50851 2863 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms