RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 ZNRF2Q8NHG8 242 aa15.79■□□□□ 0.12
APOE-201ENST00000252486 LCE6AA0A183 80 aa15.78■□□□□ 0.12
APOE-201ENST00000252486 LY6G6CO95867 125 aa15.78■□□□□ 0.12
APOE-201ENST00000252486 ESRGQ1W209 222 aa15.78■□□□□ 0.12
APOE-201ENST00000252486 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.78■□□□□ 0.12
APOE-201ENST00000252486 NEXN-AS1Q8NBZ9 246 aa15.78■□□□□ 0.12
APOE-201ENST00000252486 MRAP2Q96G30 205 aa15.78■□□□□ 0.12
APOE-201ENST00000252486 LYPD5Q6UWN5 251 aa15.77■□□□□ 0.12
APOE-201ENST00000252486 AMN1Q8IY45 258 aa15.77■□□□□ 0.12
APOE-201ENST00000252486 NIT2Q9NQR4 276 aa15.77■□□□□ 0.12
APOE-201ENST00000252486 Q9UF83 564 aa15.77■□□□□ 0.12
APOE-201ENST00000252486 TNFRSF18Q9Y5U5 241 aa15.77■□□□□ 0.12
APOE-201ENST00000252486 PLECQ15149 4684 aaKnown RBP15.76■□□□□ 0.11
APOE-201ENST00000252486 RAB4AP20338 218 aa15.76■□□□□ 0.11
APOE-201ENST00000252486 FAM104BQ5XKR9 115 aa15.76■□□□□ 0.11
APOE-201ENST00000252486 RNF185Q96GF1 192 aa15.76■□□□□ 0.11
APOE-201ENST00000252486 UBE2D3P61077 147 aa15.75■□□□□ 0.11
APOE-201ENST00000252486 UBE2D2P62837 147 aa15.75■□□□□ 0.11
APOE-201ENST00000252486 GTSF1LQ9H1H1 148 aa15.75■□□□□ 0.11
APOE-201ENST00000252486 MRPS16Q9Y3D3 137 aaKnown RBP15.75■□□□□ 0.11
APOE-201ENST00000252486 LINC00588Q9Y4M8 146 aa15.75■□□□□ 0.11
APOE-201ENST00000252486 URGCP-MRPS24S4R325 110 aa15.74■□□□□ 0.11
APOE-201ENST00000252486 PPP1R17O96001 155 aa15.73■□□□□ 0.11
APOE-201ENST00000252486 DAZ4Q86SG3 579 aaKnown RBP15.73■□□□□ 0.11
APOE-201ENST00000252486 UPK3BQ9BT76 320 aa15.73■□□□□ 0.11
APOE-201ENST00000252486 DAZ3Q9NR90 486 aaKnown RBP15.73■□□□□ 0.11
APOE-201ENST00000252486 TRAV26-2A0A0B4J265 109 aa15.72■□□□□ 0.11
APOE-201ENST00000252486 COX19Q49B96 90 aa15.71■□□□□ 0.11
APOE-201ENST00000252486 TMEM97Q5BJF2 176 aa15.71■□□□□ 0.11
APOE-201ENST00000252486 MRPL51Q4U2R6 128 aaKnown RBP15.7■□□□□ 0.1
APOE-201ENST00000252486 ALMS1Q8TCU4 4167 aa15.69■□□□□ 0.1
APOE-201ENST00000252486 TRBV6-5A0A0K0K1A5 114 aa15.69■□□□□ 0.1
APOE-201ENST00000252486 PPBPP02775 128 aa15.69■□□□□ 0.1
APOE-201ENST00000252486 OR10J3Q5JRS4 329 aa15.69■□□□□ 0.1
APOE-201ENST00000252486 LELP1Q5T871 98 aa15.69■□□□□ 0.1
APOE-201ENST00000252486 TRAV8-6A0A0B4J262 113 aa15.68■□□□□ 0.1
APOE-201ENST00000252486 CKS2P33552 79 aa15.68■□□□□ 0.1
APOE-201ENST00000252486 ATRAIDQ6UW56 229 aa15.68■□□□□ 0.1
APOE-201ENST00000252486 RPL39LQ96EH5 51 aaKnown RBP15.67■□□□□ 0.1
APOE-201ENST00000252486 SMCO4Q9NRQ5 59 aa15.67■□□□□ 0.1
APOE-201ENST00000252486 TMEM136Q6ZRR5 245 aa15.66■□□□□ 0.1
APOE-201ENST00000252486 GNB1LQ9BYB4 327 aa15.66■□□□□ 0.1
APOE-201ENST00000252486 ST20Q9HBF5 79 aa15.66■□□□□ 0.1
APOE-201ENST00000252486 TRBV24-1A0A075B6N3 115 aa15.65■□□□□ 0.1
APOE-201ENST00000252486 HLA-DQA1P01909 254 aa15.65■□□□□ 0.1
APOE-201ENST00000252486 ELOBQ15370 118 aa15.65■□□□□ 0.1
APOE-201ENST00000252486 Q9H8V8 135 aa15.65■□□□□ 0.1
APOE-201ENST00000252486 IGHV3-38A0A0C4DH36 116 aa15.64■□□□□ 0.09
APOE-201ENST00000252486 NCR2O95944 276 aa15.64■□□□□ 0.09
APOE-201ENST00000252486 MT-ND6P03923 174 aa15.64■□□□□ 0.09
APOE-201ENST00000252486 ORMDL3Q8N138 153 aa15.64■□□□□ 0.09
APOE-201ENST00000252486 SDHAF1A6NFY7 115 aa15.63■□□□□ 0.09
APOE-201ENST00000252486 SMKR1H3BMG3 65 aa15.63■□□□□ 0.09
APOE-201ENST00000252486 PHOX2AO14813 284 aa15.63■□□□□ 0.09
APOE-201ENST00000252486 SIVA1O15304 175 aa15.63■□□□□ 0.09
APOE-201ENST00000252486 NRACQ8N912 160 aa15.63■□□□□ 0.09
APOE-201ENST00000252486 DNAH1Q9P2D7 4330 aa15.62■□□□□ 0.09
APOE-201ENST00000252486 TRBV6-8A0A0A6YYG3 113 aa15.62■□□□□ 0.09
APOE-201ENST00000252486 D6R8Y8 96 aa15.62■□□□□ 0.09
APOE-201ENST00000252486 GAS8-AS1O95177 125 aa15.62■□□□□ 0.09
APOE-201ENST00000252486 RPS10P46783 165 aaKnown RBP15.62■□□□□ 0.09
APOE-201ENST00000252486 C20orf78Q9BR46 151 aa15.62■□□□□ 0.09
APOE-201ENST00000252486 LAMTOR2Q9Y2Q5 125 aa15.62■□□□□ 0.09
APOE-201ENST00000252486 TGIF2-C20orf24A0A0A6YYL0 155 aa15.61■□□□□ 0.09
APOE-201ENST00000252486 SUMO2P61956 95 aaKnown RBP15.61■□□□□ 0.09
APOE-201ENST00000252486 COTL1Q14019 142 aa15.61■□□□□ 0.09
APOE-201ENST00000252486 LYSTQ99698 3801 aa15.6■□□□□ 0.09
APOE-201ENST00000252486 VPS13DQ5THJ4 4388 aa15.6■□□□□ 0.09
APOE-201ENST00000252486 TRBV25-1A0A075B6N4 114 aa15.6■□□□□ 0.09
APOE-201ENST00000252486 I3L3M4 83 aa15.6■□□□□ 0.09
APOE-201ENST00000252486 APCSP02743 223 aa15.6■□□□□ 0.09
APOE-201ENST00000252486 PRELID3AQ96N28 172 aa15.6■□□□□ 0.09
APOE-201ENST00000252486 TMEM70Q9BUB7 260 aa15.6■□□□□ 0.09
APOE-201ENST00000252486 IGHV1-24A0A0C4DH33 117 aa15.59■□□□□ 0.09
APOE-201ENST00000252486 K7EP13 123 aa15.59■□□□□ 0.09
APOE-201ENST00000252486 VCYO14598 125 aa15.59■□□□□ 0.09
APOE-201ENST00000252486 TNFRSF6BO95407 300 aa15.59■□□□□ 0.09
APOE-201ENST00000252486 PMCHP20382 165 aa15.59■□□□□ 0.09
APOE-201ENST00000252486 POLR2KP53803 58 aaKnown RBP15.59■□□□□ 0.09
APOE-201ENST00000252486 PKIAP61925 76 aa15.59■□□□□ 0.09
APOE-201ENST00000252486 RPL32P62910 135 aaKnown RBP15.59■□□□□ 0.09
APOE-201ENST00000252486 TTC32Q5I0X7 151 aa15.59■□□□□ 0.09
APOE-201ENST00000252486 WFDC10BQ8IUB3 73 aa15.59■□□□□ 0.09
APOE-201ENST00000252486 YPEL4Q96NS1 127 aa15.59■□□□□ 0.09
APOE-201ENST00000252486 TRBV27A0A0K0K1C4 114 aa15.58■□□□□ 0.08
APOE-201ENST00000252486 DNAH10OSP0CZ25 163 aa15.58■□□□□ 0.08
APOE-201ENST00000252486 IQCJQ1A5X6 159 aa15.58■□□□□ 0.08
APOE-201ENST00000252486 CBLN2Q8IUK8 224 aa15.58■□□□□ 0.08
APOE-201ENST00000252486 IGLV2-18A0A075B6J9 118 aa15.57■□□□□ 0.08
APOE-201ENST00000252486 TRAV9-2A0A087WT02 112 aa15.57■□□□□ 0.08
APOE-201ENST00000252486 NTM-AS1Q6ZSK4 140 aa15.57■□□□□ 0.08
APOE-201ENST00000252486 NBDYA0A0U1RRE5 68 aa15.56■□□□□ 0.08
APOE-201ENST00000252486 NPYP01303 97 aa15.56■□□□□ 0.08
APOE-201ENST00000252486 S100A1P23297 94 aa15.56■□□□□ 0.08
APOE-201ENST00000252486 LINC01556Q5JQF7 62 aa15.56■□□□□ 0.08
APOE-201ENST00000252486 TCAPO15273 167 aa15.55■□□□□ 0.08
APOE-201ENST00000252486 AMTP48728 403 aa15.55■□□□□ 0.08
APOE-201ENST00000252486 KIR2DL4Q99706 377 aa15.55■□□□□ 0.08
APOE-201ENST00000252486 TMEM243Q9BU79 118 aa15.55■□□□□ 0.08
APOE-201ENST00000252486 CHCHD7Q9BUK0 85 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms