RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 FOXA3P55318 350 aaPredicted RBP10.98□□□□□ -0.65
CLPP-201ENST00000245816 LINC00315P59091 139 aa10.98□□□□□ -0.65
CLPP-201ENST00000245816 SVBPQ8N300 66 aa10.98□□□□□ -0.65
CLPP-201ENST00000245816 CTRLP40313 264 aa10.97□□□□□ -0.65
CLPP-201ENST00000245816 WDR73Q6P4I2 378 aa10.97□□□□□ -0.65
CLPP-201ENST00000245816 Q6ZSN1 163 aa10.97□□□□□ -0.65
CLPP-201ENST00000245816 SAMD10Q9BYL1 202 aa10.97□□□□□ -0.65
CLPP-201ENST00000245816 CTDSP1Q9GZU7 261 aa10.97□□□□□ -0.65
CLPP-201ENST00000245816 JPT2Q9H910 190 aa10.97□□□□□ -0.65
CLPP-201ENST00000245816 NAT8BQ9UHF3 227 aa10.97□□□□□ -0.65
CLPP-201ENST00000245816 TRBV10-1A0A0K0K1A3 114 aa10.96□□□□□ -0.65
CLPP-201ENST00000245816 SMIM27A0A1W2PRY6 76 aa10.96□□□□□ -0.65
CLPP-201ENST00000245816 C7orf77A4D0Y5 90 aa10.96□□□□□ -0.65
CLPP-201ENST00000245816 CDK2AP2O75956 126 aa10.96□□□□□ -0.65
CLPP-201ENST00000245816 DNAH10OSP0CZ25 163 aa10.96□□□□□ -0.65
CLPP-201ENST00000245816 LINC00694P0DN24 101 aa10.96□□□□□ -0.65
CLPP-201ENST00000245816 NTF3P20783 257 aa10.96□□□□□ -0.65
CLPP-201ENST00000245816 TWIST1Q15672 202 aa10.96□□□□□ -0.65
CLPP-201ENST00000245816 ATP6V0E2Q8NHE4 81 aa10.96□□□□□ -0.65
CLPP-201ENST00000245816 GTSF1LQ9H1H1 148 aa10.96□□□□□ -0.65
CLPP-201ENST00000245816 RPS10P5Q9NQ39 176 aa10.96□□□□□ -0.65
CLPP-201ENST00000245816 SNAPINO95295 136 aa10.95□□□□□ -0.66
CLPP-201ENST00000245816 EVI2AP22794 236 aa10.95□□□□□ -0.66
CLPP-201ENST00000245816 RAB4BP61018 213 aa10.95□□□□□ -0.66
CLPP-201ENST00000245816 RHEBQ15382 184 aa10.95□□□□□ -0.66
CLPP-201ENST00000245816 NUP35Q8NFH5 326 aa10.95□□□□□ -0.66
CLPP-201ENST00000245816 MSRB1Q9NZV6 116 aa10.95□□□□□ -0.66
CLPP-201ENST00000245816 VPS13BQ7Z7G8 4022 aa10.94□□□□□ -0.66
CLPP-201ENST00000245816 A0A087WWL8 130 aa10.94□□□□□ -0.66
CLPP-201ENST00000245816 TRAV8-6A0A0B4J262 113 aa10.94□□□□□ -0.66
CLPP-201ENST00000245816 A0A1B0GUT8 65 aa10.94□□□□□ -0.66
CLPP-201ENST00000245816 SMIM17P0DL12 118 aa10.94□□□□□ -0.66
CLPP-201ENST00000245816 RIGQ13278 110 aa10.94□□□□□ -0.66
CLPP-201ENST00000245816 LELP1Q5T871 98 aa10.94□□□□□ -0.66
CLPP-201ENST00000245816 FAM74A4Q5TZK3 123 aa10.94□□□□□ -0.66
CLPP-201ENST00000245816 C10orf126Q8N4M7 172 aa10.94□□□□□ -0.66
CLPP-201ENST00000245816 A0A087WWC5 75 aa10.93□□□□□ -0.66
CLPP-201ENST00000245816 TRGC1P0CF51 173 aa10.93□□□□□ -0.66
CLPP-201ENST00000245816 SMIM15Q7Z3B0 74 aa10.93□□□□□ -0.66
CLPP-201ENST00000245816 NFE4Q86UQ8 179 aa10.93□□□□□ -0.66
CLPP-201ENST00000245816 C14orf178Q8N769 122 aaPredicted RBP10.93□□□□□ -0.66
CLPP-201ENST00000245816 AP1S3Q96PC3 154 aa10.93□□□□□ -0.66
CLPP-201ENST00000245816 CNFNQ9BYD5 112 aa10.93□□□□□ -0.66
CLPP-201ENST00000245816 IGHV3-38A0A0C4DH36 116 aa10.92□□□□□ -0.66
CLPP-201ENST00000245816 LINC01556Q5JQF7 62 aa10.92□□□□□ -0.66
CLPP-201ENST00000245816 WFDC10BQ8IUB3 73 aa10.92□□□□□ -0.66
CLPP-201ENST00000245816 S100PP25815 95 aa10.91□□□□□ -0.66
CLPP-201ENST00000245816 KCNIP4Q6PIL6 250 aa10.91□□□□□ -0.66
CLPP-201ENST00000245816 MAPKAPK5-AS1Q8N8E1 139 aa10.91□□□□□ -0.66
CLPP-201ENST00000245816 IMMP2LQ96T52 175 aa10.91□□□□□ -0.66
CLPP-201ENST00000245816 HERC1Q15751 4861 aa10.9□□□□□ -0.66
CLPP-201ENST00000245816 TRBV7-3A0A075B6L6 115 aa10.9□□□□□ -0.66
CLPP-201ENST00000245816 GAGE12JA6NER3 117 aa10.9□□□□□ -0.66
CLPP-201ENST00000245816 F5H697 171 aa10.9□□□□□ -0.66
CLPP-201ENST00000245816 RPL36AP83881 106 aaKnown RBP10.9□□□□□ -0.66
CLPP-201ENST00000245816 GAGE1Q13065 139 aa10.9□□□□□ -0.66
CLPP-201ENST00000245816 GAGE4Q13068 117 aa10.9□□□□□ -0.66
CLPP-201ENST00000245816 GAGE5Q13069 117 aa10.9□□□□□ -0.66
CLPP-201ENST00000245816 GAGE13Q4V321 117 aa10.9□□□□□ -0.66
CLPP-201ENST00000245816 OR10J3Q5JRS4 329 aa10.9□□□□□ -0.66
CLPP-201ENST00000245816 MRPL54Q6P161 138 aaKnown RBP10.9□□□□□ -0.66
CLPP-201ENST00000245816 RPL36ALQ969Q0 106 aaKnown RBP10.9□□□□□ -0.66
CLPP-201ENST00000245816 TMEM242Q9NWH2 141 aa10.9□□□□□ -0.66
CLPP-201ENST00000245816 KIF25-AS1Q9Y6Z4 181 aa10.9□□□□□ -0.66
CLPP-201ENST00000245816 MGPP08493 103 aa10.89□□□□□ -0.67
CLPP-201ENST00000245816 ZNF56Q15929 161 aa10.89□□□□□ -0.67
CLPP-201ENST00000245816 BTF3L4Q96K17 158 aa10.89□□□□□ -0.67
CLPP-201ENST00000245816 DPH3P1Q9H4G8 78 aa10.89□□□□□ -0.67
CLPP-201ENST00000245816 URGCP-MRPS24S4R325 110 aa10.89□□□□□ -0.67
CLPP-201ENST00000245816 A0A1B0GW15 77 aa10.88□□□□□ -0.67
CLPP-201ENST00000245816 CAMPP49913 170 aa10.88□□□□□ -0.67
CLPP-201ENST00000245816 Q8N1X5 172 aa10.88□□□□□ -0.67
CLPP-201ENST00000245816 Q9UF83 564 aa10.88□□□□□ -0.67
CLPP-201ENST00000245816 S100A8P05109 93 aa10.87□□□□□ -0.67
CLPP-201ENST00000245816 UBE2D3P61077 147 aa10.87□□□□□ -0.67
CLPP-201ENST00000245816 UBE2D2P62837 147 aa10.87□□□□□ -0.67
CLPP-201ENST00000245816 ATRAIDQ6UW56 229 aa10.87□□□□□ -0.67
CLPP-201ENST00000245816 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.87□□□□□ -0.67
CLPP-201ENST00000245816 IBA57-AS1B1ANH7 110 aa10.86□□□□□ -0.67
CLPP-201ENST00000245816 HBBP68871 147 aa10.86□□□□□ -0.67
CLPP-201ENST00000245816 H7C1H1 209 aa10.85□□□□□ -0.67
CLPP-201ENST00000245816 XGP55808 180 aa10.85□□□□□ -0.67
CLPP-201ENST00000245816 LAGE3Q14657 143 aa10.85□□□□□ -0.67
CLPP-201ENST00000245816 ATP5L2Q7Z4Y8 100 aa10.85□□□□□ -0.67
CLPP-201ENST00000245816 NEXN-AS1Q8NBZ9 246 aa10.85□□□□□ -0.67
CLPP-201ENST00000245816 DNAJC30Q96LL9 226 aa10.85□□□□□ -0.67
CLPP-201ENST00000245816 TMEM191AQ9H0A3 160 aa10.85□□□□□ -0.67
CLPP-201ENST00000245816 TRAV9-1A0A075B6T8 112 aa10.84□□□□□ -0.67
CLPP-201ENST00000245816 A0A087WTM6 91 aa10.84□□□□□ -0.67
CLPP-201ENST00000245816 A0A1B0GXF2 115 aa10.84□□□□□ -0.67
CLPP-201ENST00000245816 TMEM97Q5BJF2 176 aa10.84□□□□□ -0.67
CLPP-201ENST00000245816 CHCHD7Q9BUK0 85 aa10.84□□□□□ -0.67
CLPP-201ENST00000245816 KRTAP10-1P60331 282 aa10.83□□□□□ -0.68
CLPP-201ENST00000245816 DAZ4Q86SG3 579 aaKnown RBP10.83□□□□□ -0.68
CLPP-201ENST00000245816 DAZ3Q9NR90 486 aaKnown RBP10.83□□□□□ -0.68
CLPP-201ENST00000245816 SMCO4Q9NRQ5 59 aa10.83□□□□□ -0.68
CLPP-201ENST00000245816 M0QY20 66 aa10.82□□□□□ -0.68
CLPP-201ENST00000245816 SUMO4Q6EEV6 95 aa10.82□□□□□ -0.68
CLPP-201ENST00000245816 AMN1Q8IY45 258 aa10.82□□□□□ -0.68
CLPP-201ENST00000245816 FRZBQ92765 325 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms