RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Sptbn2Q68FG2 2388 aa10.33□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Hbb-b2P02089 147 aa10.33□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Trav7-2Q5R1I3 112 aa10.33□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Prss50Q8BLH5 439 aa10.33□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 P2ry6Q9ERK9 328 aa10.33□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Trav6d-5A0A075B6B9 112 aa10.33□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 1500009C09RikD3YYW9 81 aa10.33□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Il2raP01590 268 aa10.33□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Hoxc4Q08624 264 aa10.33□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Tmem171Q4KL18 322 aa10.33□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Tff3Q62395 81 aa10.33□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Chac1Q8R3J5 223 aa10.33□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Znf106O88466 1888 aa10.33□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Oosp2Q4FZG8 168 aa10.33□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Olfr875Q7TRE5 310 aa10.33□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Alpk3Q924C5 1678 aa10.33□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Ighv1-22A0A075B5U7 117 aa10.32□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Q3UNZ8 350 aa10.32□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Trav7d-3Q5R1I1 112 aa10.32□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Smim19Q80ZU4 107 aa10.32□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Gm10118Q8C8J5 116 aa10.32□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Prss8Q9ESD1 342 aa10.32□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Crybb3Q9JJU9 211 aa10.32□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Trav16nA0A075B634 117 aa10.32□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Igkv6-29A0A0G2JEI6 115 aa10.32□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Fam240bJ3QMB3 78 aa10.32□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Ca11O70354 328 aa10.32□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 PpyP10601 100 aa10.32□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 LtbP41155 306 aa10.32□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 SergefQ80YD6 464 aa10.32□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Sp7Q8VI67 428 aa10.32□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Cd200r1Q9ES57 326 aa10.32□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Gm10767Q3TQP0 103 aa10.32□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Clec4b2Q67DU8 208 aa10.32□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Rtn4rl2Q7M6Z0 420 aa10.32□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 MetrnQ8C1Q4 291 aa10.32□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Gm4881A0A140LIR9 352 aa10.32□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 AgmatA2AS89 358 aa10.32□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Psg25Q497W1 475 aa10.32□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Lrp5Q91VN0 1614 aa10.32□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Gm21983D6RFS9 131 aa10.32□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Alox12bO70582 701 aa10.32□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Hapln4Q80WM4 400 aa10.32□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Zpld1Q8BGZ8 415 aa10.32□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Trav7n-4A0A075B620 113 aa10.31□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Gm42957D6RFQ2 366 aa10.31□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Defa27F2Z403 93 aa10.31□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 D430019H16RikJ3QPM6 83 aa10.31□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Itgbl1Q8VDV0 494 aa10.31□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Slc25a15Q9WVD5 301 aa10.31□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Pi4kaE9Q3L2 2105 aa10.31□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Mtatp8P03930 67 aa10.31□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Mst1P26928 716 aa10.31□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 GalnsQ571E4 520 aa10.31□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Cd99Q8VCN6 175 aa10.31□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Tmem100Q9CQG9 134 aa10.31□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 8030423J24RikQ9CX45 142 aa10.31□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Rab1bQ9D1G1 201 aa10.31□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Ccl5P30882 91 aa10.31□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Ly6fP35460 134 aa10.31□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Fbxo46Q8BG80 603 aa10.31□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Rnase6Q9D244 153 aa10.31□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 PolP10400 120 aa10.31□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 CenpvQ9CXS4 252 aa10.31□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Gm2381G3UY53 305 aa10.3□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Snrnp40Q6PE01 358 aa10.3□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 SostQ99P68 211 aa10.3□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Igkv6-25A0A140T8N7 115 aa10.3□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 P01746 140 aa10.3□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Wipf3P0C7L0 485 aa10.3□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Efna2P52801 209 aa10.3□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Gm94Q3V2D2 93 aa10.3□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Olfr553Q7TRS6 326 aa10.3□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 H2al3Q9D4U4 128 aa10.3□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Lhx2Q9Z0S2 406 aa10.3□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Shank1D3YZU1 2167 aa10.3□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 TprF6ZDS4 2431 aaKnown RBP10.3□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Igkv10-94A0A075B5L1 115 aa10.3□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Trav12d-1A0N8R0 115 aa10.3□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Iqcf6G3UWF2 157 aa10.3□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 3100002H09RikQ9CXW6 140 aa10.3□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Ndufb8Q9D6J5 186 aa10.3□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Gm45871A0A1B0GRI9 540 aa10.3□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Fam89bQ9QUI1 189 aa10.3□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Nat6Q9R123 314 aa10.3□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 St6galnac3Q9WUV2 305 aa10.3□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Umad1E0CX23 159 aa10.29□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 GchfrP99025 84 aa10.29□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Gm16503Q8C6M9 103 aa10.29□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Neurl3Q8CJC5 254 aa10.29□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Arid1bE9Q4N7 2244 aa10.29□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Gm29423A0A087WRM1 55 aa10.29□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Gm6525A0A0A6YW33 106 aa10.29□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Igkv9-124A0A0G2JDR3 117 aa10.29□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Slc25a53A2AF28 346 aa10.29□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Cisd3B1AR13 137 aa10.29□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Foxa2P35583 459 aa10.29□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Srsf1Q6PDM2 248 aaKnown RBP10.29□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Iah1Q9DB29 249 aa10.29□□□□□ -0.76
Pcdhac1-201ENSMUST00000007584 Prss30Q9QYZ9 310 aa10.29□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 127.2 ms