RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 A0A087WWL8 130 aa10.35□□□□□ -0.75
PHGDH-233ENST00000642021 A0A1B0GWB2 263 aa10.35□□□□□ -0.75
PHGDH-233ENST00000642021 M0QXV9 152 aa10.35□□□□□ -0.75
PHGDH-233ENST00000642021 MORN3Q6PF18 240 aaPredicted RBP10.35□□□□□ -0.75
PHGDH-233ENST00000642021 POM121L12Q8N7R1 296 aa10.35□□□□□ -0.75
PHGDH-233ENST00000642021 MRPL16Q9NX20 251 aaKnown RBP10.35□□□□□ -0.75
PHGDH-233ENST00000642021 COX6B1P14854 86 aa10.35□□□□□ -0.75
PHGDH-233ENST00000642021 GNLYP22749 145 aa10.35□□□□□ -0.75
PHGDH-233ENST00000642021 GAGE5Q13069 117 aa10.35□□□□□ -0.75
PHGDH-233ENST00000642021 GAGE6Q13070 117 aa10.35□□□□□ -0.75
PHGDH-233ENST00000642021 SPANXB1Q9NS25 103 aaPredicted RBP10.35□□□□□ -0.75
PHGDH-233ENST00000642021 CSPG4Q6UVK1 2322 aa10.35□□□□□ -0.75
PHGDH-233ENST00000642021 ZNF815PA8K554 130 aa10.34□□□□□ -0.75
PHGDH-233ENST00000642021 KLLNB2CW77 178 aa10.34□□□□□ -0.75
PHGDH-233ENST00000642021 NXPH4O95158 308 aa10.34□□□□□ -0.75
PHGDH-233ENST00000642021 RPL39P62891 51 aaKnown RBP10.34□□□□□ -0.75
PHGDH-233ENST00000642021 DAZ1Q9NQZ3 744 aaKnown RBP10.34□□□□□ -0.75
PHGDH-233ENST00000642021 C11orf86A6NJI1 115 aa10.34□□□□□ -0.75
PHGDH-233ENST00000642021 F8W1H4 67 aa10.34□□□□□ -0.75
PHGDH-233ENST00000642021 LINC01619G3V211 115 aa10.34□□□□□ -0.75
PHGDH-233ENST00000642021 IGLV1-40P01703 118 aa10.34□□□□□ -0.75
PHGDH-233ENST00000642021 ETDBQ3ZM63 59 aa10.34□□□□□ -0.75
PHGDH-233ENST00000642021 TP53TG1Q9Y2A0 90 aa10.34□□□□□ -0.75
PHGDH-233ENST00000642021 IGLV4-69A0A075B6H9 119 aa10.33□□□□□ -0.76
PHGDH-233ENST00000642021 POLR2KP53803 58 aaKnown RBP10.33□□□□□ -0.76
PHGDH-233ENST00000642021 SUMO4Q6EEV6 95 aa10.33□□□□□ -0.76
PHGDH-233ENST00000642021 VCX2Q9H322 139 aa10.33□□□□□ -0.76
PHGDH-233ENST00000642021 IGHV4OR15-8A0A075B7B6 117 aa10.33□□□□□ -0.76
PHGDH-233ENST00000642021 A0A087WW49 117 aa10.33□□□□□ -0.76
PHGDH-233ENST00000642021 TRAV12-3A0A0B4J271 114 aa10.33□□□□□ -0.76
PHGDH-233ENST00000642021 IGIPA6NJ69 53 aa10.33□□□□□ -0.76
PHGDH-233ENST00000642021 H3BUA1 57 aa10.33□□□□□ -0.76
PHGDH-233ENST00000642021 ZFP2Q6ZN57 461 aa10.33□□□□□ -0.76
PHGDH-233ENST00000642021 DCANP1Q8TF63 244 aa10.33□□□□□ -0.76
PHGDH-233ENST00000642021 PRO0461Q9UI25 63 aa10.33□□□□□ -0.76
PHGDH-233ENST00000642021 HOXA3O43365 443 aaPredicted RBP10.32□□□□□ -0.76
PHGDH-233ENST00000642021 AVPP01185 164 aa10.32□□□□□ -0.76
PHGDH-233ENST00000642021 FAM159AQ6UWV7 190 aa10.32□□□□□ -0.76
PHGDH-233ENST00000642021 SPATA25Q9BR10 227 aa10.32□□□□□ -0.76
PHGDH-233ENST00000642021 IGHV4-30-2A0A087WSY4 118 aa10.31□□□□□ -0.76
PHGDH-233ENST00000642021 CD7P09564 240 aa10.31□□□□□ -0.76
PHGDH-233ENST00000642021 C10orf99Q6UWK7 81 aa10.31□□□□□ -0.76
PHGDH-233ENST00000642021 SCGB1D4Q6XE38 83 aa10.31□□□□□ -0.76
PHGDH-233ENST00000642021 C10orf105Q8TEF2 133 aa10.31□□□□□ -0.76
PHGDH-233ENST00000642021 PIMREGQ9BSJ6 248 aa10.31□□□□□ -0.76
PHGDH-233ENST00000642021 F5H697 171 aa10.31□□□□□ -0.76
PHGDH-233ENST00000642021 PPP1R17O96001 155 aa10.31□□□□□ -0.76
PHGDH-233ENST00000642021 ERG28Q9UKR5 140 aa10.31□□□□□ -0.76
PHGDH-233ENST00000642021 INSL3P51460 131 aa10.31□□□□□ -0.76
PHGDH-233ENST00000642021 CFHR3Q02985 330 aa10.31□□□□□ -0.76
PHGDH-233ENST00000642021 GAGE13Q4V321 117 aa10.31□□□□□ -0.76
PHGDH-233ENST00000642021 SFTA2Q6UW10 78 aa10.31□□□□□ -0.76
PHGDH-233ENST00000642021 CFAP46Q8IYW2 2715 aa10.3□□□□□ -0.76
PHGDH-233ENST00000642021 TRAV12-2A0A075B6T6 113 aa10.3□□□□□ -0.76
PHGDH-233ENST00000642021 IGKV3-20P01619 116 aa10.3□□□□□ -0.76
PHGDH-233ENST00000642021 ZNF418Q8TF45 676 aaPredicted RBP10.3□□□□□ -0.76
PHGDH-233ENST00000642021 SPAG8Q99932 426 aaPredicted RBP10.3□□□□□ -0.76
PHGDH-233ENST00000642021 MDFICQ9P1T7 246 aa10.3□□□□□ -0.76
PHGDH-233ENST00000642021 SORL1Q92673 2214 aa10.3□□□□□ -0.76
PHGDH-233ENST00000642021 SDHAF1A6NFY7 115 aa10.3□□□□□ -0.76
PHGDH-233ENST00000642021 LINC01549A6NIU2 74 aa10.3□□□□□ -0.76
PHGDH-233ENST00000642021 SRSF9Q13242 221 aaKnown RBP eCLIP10.3□□□□□ -0.76
PHGDH-233ENST00000642021 FAM74A4Q5TZK3 123 aa10.3□□□□□ -0.76
PHGDH-233ENST00000642021 TSPEAR-AS2P59090 65 aa10.29□□□□□ -0.76
PHGDH-233ENST00000642021 ZNRF2Q8NHG8 242 aa10.29□□□□□ -0.76
PHGDH-233ENST00000642021 ZNF688P0C7X2 276 aa10.29□□□□□ -0.76
PHGDH-233ENST00000642021 FLNCQ14315 2725 aa10.29□□□□□ -0.76
PHGDH-233ENST00000642021 VCYO14598 125 aa10.28□□□□□ -0.76
PHGDH-233ENST00000642021 UBE2D1P51668 147 aa10.28□□□□□ -0.76
PHGDH-233ENST00000642021 PMVKQ15126 192 aa10.28□□□□□ -0.76
PHGDH-233ENST00000642021 RAX2Q96IS3 184 aa10.28□□□□□ -0.76
PHGDH-233ENST00000642021 CCL19Q99731 98 aa10.28□□□□□ -0.76
PHGDH-233ENST00000642021 OPRPNQ99935 248 aaPredicted RBP10.28□□□□□ -0.76
PHGDH-233ENST00000642021 UTP20O75691 2785 aaKnown RBP10.28□□□□□ -0.76
PHGDH-233ENST00000642021 A0A0J9YY99 117 aa10.28□□□□□ -0.76
PHGDH-233ENST00000642021 J3QR89 54 aa10.27□□□□□ -0.76
PHGDH-233ENST00000642021 KIR2DL4Q99706 377 aa10.27□□□□□ -0.76
PHGDH-233ENST00000642021 ZNF256Q9Y2P7 627 aaPredicted RBP10.27□□□□□ -0.76
PHGDH-233ENST00000642021 DOPEY2Q9Y3R5 2298 aa10.27□□□□□ -0.77
PHGDH-233ENST00000642021 K7EMT4 169 aa10.27□□□□□ -0.77
PHGDH-233ENST00000642021 MSMBP08118 114 aa10.27□□□□□ -0.77
PHGDH-233ENST00000642021 TRAV25A0A0B4J276 109 aa10.26□□□□□ -0.77
PHGDH-233ENST00000642021 IGHV3-16A0A0C4DH30 117 aa10.26□□□□□ -0.77
PHGDH-233ENST00000642021 TRBV27A0A0K0K1C4 114 aa10.26□□□□□ -0.77
PHGDH-233ENST00000642021 APOMO95445 188 aa10.26□□□□□ -0.77
PHGDH-233ENST00000642021 TGFAP01135 160 aa10.26□□□□□ -0.77
PHGDH-233ENST00000642021 SMCPP49901 116 aaPredicted RBP10.26□□□□□ -0.77
PHGDH-233ENST00000642021 CREBBPQ92793 2442 aa10.26□□□□□ -0.77
PHGDH-233ENST00000642021 ZANQ9Y493 2812 aa10.26□□□□□ -0.77
PHGDH-233ENST00000642021 C5orf47Q569G3 176 aa10.26□□□□□ -0.77
PHGDH-233ENST00000642021 TMEM170BQ5T4T1 132 aa10.26□□□□□ -0.77
PHGDH-233ENST00000642021 Q8N1Y9 231 aa10.26□□□□□ -0.77
PHGDH-233ENST00000642021 ANAPC13Q9BS18 74 aa10.26□□□□□ -0.77
PHGDH-233ENST00000642021 LGALS9O00182 355 aa10.26□□□□□ -0.77
PHGDH-233ENST00000642021 PSMB8P28062 276 aa10.26□□□□□ -0.77
PHGDH-233ENST00000642021 C9orf85Q96MD7 179 aa10.26□□□□□ -0.77
PHGDH-233ENST00000642021 TIMM17AQ99595 171 aa10.26□□□□□ -0.77
PHGDH-233ENST00000642021 VPREB3Q9UKI3 123 aa10.26□□□□□ -0.77
PHGDH-233ENST00000642021 M0QY20 66 aa10.25□□□□□ -0.77
PHGDH-233ENST00000642021 ZNF876PQ49A33 203 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms