RNA–Protein interactions for RNA: ENST00000628306.2

CAPNS1-216, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-216ENST00000628306 CRXO43186 299 aaPredicted RBP17.24■□□□□ 0.35
CAPNS1-216ENST00000628306 NUTF2P61970 127 aaKnown RBP17.24■□□□□ 0.35
CAPNS1-216ENST00000628306 Q6ZTC4 211 aa17.24■□□□□ 0.35
CAPNS1-216ENST00000628306 X6R8D5 127 aa17.24■□□□□ 0.35
CAPNS1-216ENST00000628306 TRAV12-3A0A0B4J271 114 aa17.23■□□□□ 0.35
CAPNS1-216ENST00000628306 TPPP3Q9BW30 176 aa17.23■□□□□ 0.35
CAPNS1-216ENST00000628306 IGHV1OR15-1A0A075B7D0 117 aa17.21■□□□□ 0.35
CAPNS1-216ENST00000628306 NTF3P20783 257 aa17.21■□□□□ 0.35
CAPNS1-216ENST00000628306 TP53TG3Q9ULZ0 132 aa17.21■□□□□ 0.35
CAPNS1-216ENST00000628306 LOC105371267A0A1B0GV96 52 aa17.2■□□□□ 0.34
CAPNS1-216ENST00000628306 RTL8CO15255 209 aa17.2■□□□□ 0.34
CAPNS1-216ENST00000628306 Q0VG73 95 aa17.2■□□□□ 0.34
CAPNS1-216ENST00000628306 DMRTA1Q5VZB9 504 aa17.2■□□□□ 0.34
CAPNS1-216ENST00000628306 TMEM191AQ9H0A3 160 aa17.2■□□□□ 0.34
CAPNS1-216ENST00000628306 NAGKQ9UJ70 344 aa17.2■□□□□ 0.34
CAPNS1-216ENST00000628306 TRAV12-2A0A075B6T6 113 aa17.19■□□□□ 0.34
CAPNS1-216ENST00000628306 S100A4P26447 101 aaKnown RBP17.19■□□□□ 0.34
CAPNS1-216ENST00000628306 SLAQ13239 276 aa17.19■□□□□ 0.34
CAPNS1-216ENST00000628306 CSNK1G2-AS1Q8NCQ2 148 aa17.19■□□□□ 0.34
CAPNS1-216ENST00000628306 TRAV10A0A0B4J240 114 aa17.18■□□□□ 0.34
CAPNS1-216ENST00000628306 GNRH2O43555 120 aa17.18■□□□□ 0.34
CAPNS1-216ENST00000628306 MIFP14174 115 aa17.18■□□□□ 0.34
CAPNS1-216ENST00000628306 HOXA5P20719 270 aa17.18■□□□□ 0.34
CAPNS1-216ENST00000628306 TWIST1Q15672 202 aa17.18■□□□□ 0.34
CAPNS1-216ENST00000628306 MUC21Q5SSG8 566 aa17.18■□□□□ 0.34
CAPNS1-216ENST00000628306 MORN3Q6PF18 240 aaPredicted RBP17.18■□□□□ 0.34
CAPNS1-216ENST00000628306 CELA1Q9UNI1 258 aa17.18■□□□□ 0.34
CAPNS1-216ENST00000628306 TRGV11A0A075B6L2 103 aa17.17■□□□□ 0.34
CAPNS1-216ENST00000628306 RNASE3P12724 160 aaKnown RBP17.17■□□□□ 0.34
CAPNS1-216ENST00000628306 NDUFA6P56556 154 aa17.17■□□□□ 0.34
CAPNS1-216ENST00000628306 SNRPEP62304 92 aaKnown RBP17.17■□□□□ 0.34
CAPNS1-216ENST00000628306 TMEM256Q8N2U0 113 aa17.17■□□□□ 0.34
CAPNS1-216ENST00000628306 NXPH4O95158 308 aa17.16■□□□□ 0.34
CAPNS1-216ENST00000628306 INSP01308 110 aa17.16■□□□□ 0.34
CAPNS1-216ENST00000628306 OR10J3Q5JRS4 329 aa17.16■□□□□ 0.34
CAPNS1-216ENST00000628306 FAM104BQ5XKR9 115 aa17.16■□□□□ 0.34
CAPNS1-216ENST00000628306 IGHV3-16A0A0C4DH30 117 aa17.15■□□□□ 0.34
CAPNS1-216ENST00000628306 ALKBH7Q9BT30 221 aaPredicted RBP17.15■□□□□ 0.34
CAPNS1-216ENST00000628306 KRTAP4-5Q9BYR2 181 aa17.15■□□□□ 0.34
CAPNS1-216ENST00000628306 H3BVH4 76 aa17.15■□□□□ 0.34
CAPNS1-216ENST00000628306 C12orf74Q32Q52 190 aa17.15■□□□□ 0.34
CAPNS1-216ENST00000628306 SPANXN1Q5VSR9 72 aa17.15■□□□□ 0.34
CAPNS1-216ENST00000628306 OR10AG1Q8NH19 301 aa17.15■□□□□ 0.34
CAPNS1-216ENST00000628306 C9orf85Q96MD7 179 aa17.15■□□□□ 0.34
CAPNS1-216ENST00000628306 C1QTNF4Q9BXJ3 329 aa17.15■□□□□ 0.34
CAPNS1-216ENST00000628306 SMIM15Q7Z3B0 74 aa17.14■□□□□ 0.33
CAPNS1-216ENST00000628306 PHLDA3Q9Y5J5 127 aa17.14■□□□□ 0.33
CAPNS1-216ENST00000628306 LRP1BQ9NZR2 4599 aa17.14■□□□□ 0.33
CAPNS1-216ENST00000628306 PRSS29PA6NIE9 313 aa17.13■□□□□ 0.33
CAPNS1-216ENST00000628306 POM121L12Q8N7R1 296 aa17.13■□□□□ 0.33
CAPNS1-216ENST00000628306 PTH2Q96A98 100 aa17.13■□□□□ 0.33
CAPNS1-216ENST00000628306 FXYD7P58549 80 aa17.12■□□□□ 0.33
CAPNS1-216ENST00000628306 KIAA1644Q3SXP7 199 aa17.12■□□□□ 0.33
CAPNS1-216ENST00000628306 PIK3CD-AS1Q5SR53 167 aa17.12■□□□□ 0.33
CAPNS1-216ENST00000628306 MSRB1Q9NZV6 116 aa17.12■□□□□ 0.33
CAPNS1-216ENST00000628306 PPBPP02775 128 aa17.11■□□□□ 0.33
CAPNS1-216ENST00000628306 SRIP30626 198 aa17.11■□□□□ 0.33
CAPNS1-216ENST00000628306 MUC21A0A0G2JKD1 596 aa17.1■□□□□ 0.33
CAPNS1-216ENST00000628306 MUC21A0A140T8X8 626 aa17.1■□□□□ 0.33
CAPNS1-216ENST00000628306 ESDP10768 282 aa17.1■□□□□ 0.33
CAPNS1-216ENST00000628306 DEFB131BA0A096LNP1 70 aa17.09■□□□□ 0.33
CAPNS1-216ENST00000628306 CBY3A6NI87 242 aa17.08■□□□□ 0.32
CAPNS1-216ENST00000628306 M0R2N4 97 aa17.08■□□□□ 0.32
CAPNS1-216ENST00000628306 RAB4AP20338 218 aa17.08■□□□□ 0.32
CAPNS1-216ENST00000628306 C1orf158Q8N1D5 194 aa17.08■□□□□ 0.32
CAPNS1-216ENST00000628306 LINC01587Q99440 93 aa17.08■□□□□ 0.32
CAPNS1-216ENST00000628306 MDFICQ9P1T7 246 aa17.08■□□□□ 0.32
CAPNS1-216ENST00000628306 XCL2Q9UBD3 114 aa17.08■□□□□ 0.32
CAPNS1-216ENST00000628306 AMN1Q8IY45 258 aa17.07■□□□□ 0.32
CAPNS1-216ENST00000628306 SYT8Q8NBV8 401 aa17.07■□□□□ 0.32
CAPNS1-216ENST00000628306 C18orf32Q8TCD1 76 aa17.07■□□□□ 0.32
CAPNS1-216ENST00000628306 RNF185Q96GF1 192 aa17.07■□□□□ 0.32
CAPNS1-216ENST00000628306 LAMTOR2Q9Y2Q5 125 aa17.07■□□□□ 0.32
CAPNS1-216ENST00000628306 P0DMU3 169 aa17.06■□□□□ 0.32
CAPNS1-216ENST00000628306 FAM231AP0DMU4 169 aa17.06■□□□□ 0.32
CAPNS1-216ENST00000628306 FAM231CP0DMU5 169 aa17.06■□□□□ 0.32
CAPNS1-216ENST00000628306 LGALS9BQ3B8N2 356 aa17.06■□□□□ 0.32
CAPNS1-216ENST00000628306 MRPL51Q4U2R6 128 aaKnown RBP17.06■□□□□ 0.32
CAPNS1-216ENST00000628306 ORMDL3Q8N138 153 aa17.06■□□□□ 0.32
CAPNS1-216ENST00000628306 HIST3H2BBQ8N257 126 aa17.06■□□□□ 0.32
CAPNS1-216ENST00000628306 SPXQ9BT56 116 aa17.06■□□□□ 0.32
CAPNS1-216ENST00000628306 NDUFAF3Q9BU61 184 aa17.06■□□□□ 0.32
CAPNS1-216ENST00000628306 Q6ZR54 194 aa17.05■□□□□ 0.32
CAPNS1-216ENST00000628306 BAGE3Q86Y29 109 aa17.05■□□□□ 0.32
CAPNS1-216ENST00000628306 GOLT1BQ9Y3E0 138 aa17.05■□□□□ 0.32
CAPNS1-216ENST00000628306 M0R381 172 aa17.04■□□□□ 0.32
CAPNS1-216ENST00000628306 EVI2AP22794 236 aa17.04■□□□□ 0.32
CAPNS1-216ENST00000628306 SSTP61278 116 aa17.04■□□□□ 0.32
CAPNS1-216ENST00000628306 PACRGQ96M98 296 aaPredicted RBP17.04■□□□□ 0.32
CAPNS1-216ENST00000628306 AP1S3Q96PC3 154 aa17.04■□□□□ 0.32
CAPNS1-216ENST00000628306 DPH3P1Q9H4G8 78 aa17.04■□□□□ 0.32
CAPNS1-216ENST00000628306 TIMM8BQ9Y5J9 83 aaPredicted RBP17.04■□□□□ 0.32
CAPNS1-216ENST00000628306 ZNF415Q09FC8 603 aa17.03■□□□□ 0.32
CAPNS1-216ENST00000628306 APOBP04114 4563 aaKnown RBP17.02■□□□□ 0.32
CAPNS1-216ENST00000628306 MRAP2Q96G30 205 aa17.02■□□□□ 0.32
CAPNS1-216ENST00000628306 GSN-AS1Q9NRJ2 163 aa17.02■□□□□ 0.32
CAPNS1-216ENST00000628306 CKS2P33552 79 aa17.02■□□□□ 0.31
CAPNS1-216ENST00000628306 C11orf72Q8NBR9 251 aa17.02■□□□□ 0.31
CAPNS1-216ENST00000628306 TMEM208Q9BTX3 173 aa17.02■□□□□ 0.31
CAPNS1-216ENST00000628306 KIF25-AS1Q9Y6Z4 181 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms