RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 TRAV12-3A0A0B4J271 114 aa13.88□□□□□ -0.19
CNOT9-209ENST00000627282 FAM159AQ6UWV7 190 aa13.88□□□□□ -0.19
CNOT9-209ENST00000627282 RETNQ9HD89 108 aa13.88□□□□□ -0.19
CNOT9-209ENST00000627282 NUTF2P61970 127 aaKnown RBP13.87□□□□□ -0.19
CNOT9-209ENST00000627282 DEFB135Q30KP9 77 aa13.87□□□□□ -0.19
CNOT9-209ENST00000627282 RNASE3P12724 160 aaKnown RBP13.86□□□□□ -0.19
CNOT9-209ENST00000627282 TDRG1Q3Y452 100 aa13.86□□□□□ -0.19
CNOT9-209ENST00000627282 PRSS3P2Q8NHM4 247 aa13.86□□□□□ -0.19
CNOT9-209ENST00000627282 XCL2Q9UBD3 114 aa13.86□□□□□ -0.19
CNOT9-209ENST00000627282 LAMTOR2Q9Y2Q5 125 aa13.86□□□□□ -0.19
CNOT9-209ENST00000627282 TIMM8BQ9Y5J9 83 aaPredicted RBP13.86□□□□□ -0.19
CNOT9-209ENST00000627282 SMKR1H3BMG3 65 aa13.86□□□□□ -0.19
CNOT9-209ENST00000627282 EVI2AP22794 236 aa13.86□□□□□ -0.19
CNOT9-209ENST00000627282 KRTDAPP60985 99 aa13.86□□□□□ -0.19
CNOT9-209ENST00000627282 SPINK13Q1W4C9 94 aa13.86□□□□□ -0.19
CNOT9-209ENST00000627282 CSNK1G2-AS1Q8NCQ2 148 aa13.86□□□□□ -0.19
CNOT9-209ENST00000627282 PHLDA3Q9Y5J5 127 aa13.86□□□□□ -0.19
CNOT9-209ENST00000627282 IGHV1-24A0A0C4DH33 117 aa13.85□□□□□ -0.19
CNOT9-209ENST00000627282 NCR2O95944 276 aa13.85□□□□□ -0.19
CNOT9-209ENST00000627282 FA2HQ7L5A8 372 aa13.85□□□□□ -0.19
CNOT9-209ENST00000627282 SPATA25Q9BR10 227 aa13.85□□□□□ -0.19
CNOT9-209ENST00000627282 TRAV12-2A0A075B6T6 113 aa13.84□□□□□ -0.19
CNOT9-209ENST00000627282 CRXO43186 299 aaPredicted RBP13.84□□□□□ -0.19
CNOT9-209ENST00000627282 NPYP01303 97 aa13.84□□□□□ -0.19
CNOT9-209ENST00000627282 C3orf79P0CE67 100 aa13.84□□□□□ -0.19
CNOT9-209ENST00000627282 RNF183Q96D59 192 aa13.84□□□□□ -0.19
CNOT9-209ENST00000627282 OVOL2Q9BRP0 275 aa13.84□□□□□ -0.19
CNOT9-209ENST00000627282 M0R381 172 aa13.83□□□□□ -0.2
CNOT9-209ENST00000627282 NXPH4O95158 308 aa13.83□□□□□ -0.2
CNOT9-209ENST00000627282 IFI27P40305 119 aaPredicted RBP13.83□□□□□ -0.2
CNOT9-209ENST00000627282 Q8N976 141 aa13.83□□□□□ -0.2
CNOT9-209ENST00000627282 C1QTNF4Q9BXJ3 329 aa13.83□□□□□ -0.2
CNOT9-209ENST00000627282 AP5S1Q9NUS5 200 aa13.83□□□□□ -0.2
CNOT9-209ENST00000627282 LOC389332A0A1B0GUA5 103 aa13.82□□□□□ -0.2
CNOT9-209ENST00000627282 PMCHL1Q16048 86 aa13.82□□□□□ -0.2
CNOT9-209ENST00000627282 TP53TG1Q9Y2A0 90 aa13.82□□□□□ -0.2
CNOT9-209ENST00000627282 IGHV1OR15-1A0A075B7D0 117 aa13.82□□□□□ -0.2
CNOT9-209ENST00000627282 SPRY2O43597 315 aa13.82□□□□□ -0.2
CNOT9-209ENST00000627282 PKIAP61925 76 aa13.82□□□□□ -0.2
CNOT9-209ENST00000627282 MAP1LC3AQ9H492 121 aa13.82□□□□□ -0.2
CNOT9-209ENST00000627282 TNFRSF6BO95407 300 aa13.81□□□□□ -0.2
CNOT9-209ENST00000627282 TEX43Q6ZNM6 134 aa13.81□□□□□ -0.2
CNOT9-209ENST00000627282 IGHV3-16A0A0C4DH30 117 aa13.8□□□□□ -0.2
CNOT9-209ENST00000627282 GAS8-AS1O95177 125 aa13.8□□□□□ -0.2
CNOT9-209ENST00000627282 LEPROTL1O95214 131 aa13.8□□□□□ -0.2
CNOT9-209ENST00000627282 ZNF664Q8N3J9 261 aa13.8□□□□□ -0.2
CNOT9-209ENST00000627282 MRAP2Q96G30 205 aa13.8□□□□□ -0.2
CNOT9-209ENST00000627282 DPH3P1Q9H4G8 78 aa13.8□□□□□ -0.2
CNOT9-209ENST00000627282 RBMY1A1P0DJD3 496 aaKnown RBP13.79□□□□□ -0.2
CNOT9-209ENST00000627282 RBMY1CP0DJD4 496 aa13.79□□□□□ -0.2
CNOT9-209ENST00000627282 BTF3P20290 206 aaKnown RBP13.79□□□□□ -0.2
CNOT9-209ENST00000627282 RBMY1FQ15415 496 aaKnown RBP13.79□□□□□ -0.2
CNOT9-209ENST00000627282 C1orf158Q8N1D5 194 aa13.79□□□□□ -0.2
CNOT9-209ENST00000627282 C9orf85Q96MD7 179 aa13.79□□□□□ -0.2
CNOT9-209ENST00000627282 LINC01546A6NGU7 62 aa13.79□□□□□ -0.2
CNOT9-209ENST00000627282 PRSS47A8MTI9 375 aa13.79□□□□□ -0.2
CNOT9-209ENST00000627282 GATA1P15976 413 aaPredicted RBP13.79□□□□□ -0.2
CNOT9-209ENST00000627282 INSP01308 110 aa13.78□□□□□ -0.2
CNOT9-209ENST00000627282 ZNF705AQ6ZN79 300 aaPredicted RBP13.78□□□□□ -0.2
CNOT9-209ENST00000627282 NRACQ8N912 160 aa13.78□□□□□ -0.2
CNOT9-209ENST00000627282 AP1S3Q96PC3 154 aa13.78□□□□□ -0.2
CNOT9-209ENST00000627282 TSTD3H0UI37 97 aa13.77□□□□□ -0.21
CNOT9-209ENST00000627282 C14orf178Q8N769 122 aaPredicted RBP13.77□□□□□ -0.21
CNOT9-209ENST00000627282 POM121L12Q8N7R1 296 aa13.77□□□□□ -0.21
CNOT9-209ENST00000627282 OR11H2Q8NH07 326 aa13.77□□□□□ -0.21
CNOT9-209ENST00000627282 PRO1933Q9H354 126 aa13.77□□□□□ -0.21
CNOT9-209ENST00000627282 NXT2Q9NPJ8 142 aaKnown RBP13.77□□□□□ -0.21
CNOT9-209ENST00000627282 HSPB8Q9UJY1 196 aa13.77□□□□□ -0.21
CNOT9-209ENST00000627282 TRGV11A0A075B6L2 103 aa13.76□□□□□ -0.21
CNOT9-209ENST00000627282 LINC00173Q6ZV60 143 aa13.76□□□□□ -0.21
CNOT9-209ENST00000627282 TMEM70Q9BUB7 260 aa13.76□□□□□ -0.21
CNOT9-209ENST00000627282 MDFICQ9P1T7 246 aa13.76□□□□□ -0.21
CNOT9-209ENST00000627282 X6R8D5 127 aa13.76□□□□□ -0.21
CNOT9-209ENST00000627282 MUC4Q99102 2169 aa13.76□□□□□ -0.21
CNOT9-209ENST00000627282 A0A096LNJ9 63 aa13.75□□□□□ -0.21
CNOT9-209ENST00000627282 LINC00587B1AMM8 73 aa13.75□□□□□ -0.21
CNOT9-209ENST00000627282 MUC7Q8TAX7 377 aa13.75□□□□□ -0.21
CNOT9-209ENST00000627282 EDA2RQ9HAV5 297 aa13.75□□□□□ -0.21
CNOT9-209ENST00000627282 KIF25-AS1Q9Y6Z4 181 aa13.75□□□□□ -0.21
CNOT9-209ENST00000627282 IGHV3OR16-12A0A075B7B8 117 aa13.75□□□□□ -0.21
CNOT9-209ENST00000627282 TRAV26-2A0A0B4J265 109 aa13.75□□□□□ -0.21
CNOT9-209ENST00000627282 C3orf84H3BNL1 204 aa13.75□□□□□ -0.21
CNOT9-209ENST00000627282 Q8N8P6 123 aa13.75□□□□□ -0.21
CNOT9-209ENST00000627282 GOLT1BQ9Y3E0 138 aa13.75□□□□□ -0.21
CNOT9-209ENST00000627282 IGLV2-18A0A075B6J9 118 aa13.74□□□□□ -0.21
CNOT9-209ENST00000627282 SYT8Q8NBV8 401 aa13.74□□□□□ -0.21
CNOT9-209ENST00000627282 C20orf144Q9BQM9 153 aa13.74□□□□□ -0.21
CNOT9-209ENST00000627282 SYS1-DBNDD2H3BUS1 97 aa13.73□□□□□ -0.21
CNOT9-209ENST00000627282 LINC00467Q9BRT7 94 aa13.73□□□□□ -0.21
CNOT9-209ENST00000627282 MAP1LC3CQ9BXW4 147 aa13.73□□□□□ -0.21
CNOT9-209ENST00000627282 CBY3A6NI87 242 aa13.72□□□□□ -0.21
CNOT9-209ENST00000627282 HBDP02042 147 aa13.72□□□□□ -0.21
CNOT9-209ENST00000627282 LINC00315P59091 139 aa13.72□□□□□ -0.21
CNOT9-209ENST00000627282 TMEM208Q9BTX3 173 aa13.72□□□□□ -0.21
CNOT9-209ENST00000627282 VAMP8Q9BV40 100 aa13.72□□□□□ -0.21
CNOT9-209ENST00000627282 PRM2P04554 102 aa13.72□□□□□ -0.21
CNOT9-209ENST00000627282 MGPP08493 103 aa13.72□□□□□ -0.21
CNOT9-209ENST00000627282 SMIM17P0DL12 118 aa13.72□□□□□ -0.21
CNOT9-209ENST00000627282 PET117Q6UWS5 81 aa13.72□□□□□ -0.21
CNOT9-209ENST00000627282 SPATA12Q7Z6I5 190 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms