RNA–Protein interactions for RNA: ENST00000621813.4

TRA2A-212, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-212ENST00000621813 IGHV3OR16-8A0A075B7F1 116 aa13.39□□□□□ -0.27
TRA2A-212ENST00000621813 TRAV2A0A0B4J234 112 aa13.39□□□□□ -0.27
TRA2A-212ENST00000621813 TRBV7-7A0A0K0K1E9 115 aa13.39□□□□□ -0.27
TRA2A-212ENST00000621813 SLC25A20O43772 301 aa13.39□□□□□ -0.27
TRA2A-212ENST00000621813 IGHG2P01859 326 aa13.39□□□□□ -0.27
TRA2A-212ENST00000621813 TRGV3P03979 118 aa13.39□□□□□ -0.27
TRA2A-212ENST00000621813 C3orf22Q8N5N4 141 aa13.39□□□□□ -0.27
TRA2A-212ENST00000621813 DUX5Q96PT3 197 aa13.39□□□□□ -0.27
TRA2A-212ENST00000621813 ODF3Q96PU9 254 aa13.39□□□□□ -0.27
TRA2A-212ENST00000621813 NXT2Q9NPJ8 142 aaKnown RBP13.39□□□□□ -0.27
TRA2A-212ENST00000621813 AGRNO00468 2067 aa13.39□□□□□ -0.27
TRA2A-212ENST00000621813 F8WDY8 70 aa13.38□□□□□ -0.27
TRA2A-212ENST00000621813 H3BUX3 64 aa13.38□□□□□ -0.27
TRA2A-212ENST00000621813 ATP5G1P05496 136 aa13.38□□□□□ -0.27
TRA2A-212ENST00000621813 C9orf153Q5TBE3 101 aa13.38□□□□□ -0.27
TRA2A-212ENST00000621813 ZFP2Q6ZN57 461 aa13.38□□□□□ -0.27
TRA2A-212ENST00000621813 USMG5Q96IX5 58 aa13.38□□□□□ -0.27
TRA2A-212ENST00000621813 FOXC2Q99958 501 aa13.38□□□□□ -0.27
TRA2A-212ENST00000621813 IMUPQ9GZP8 106 aa13.38□□□□□ -0.27
TRA2A-212ENST00000621813 U3KQE9 123 aa13.38□□□□□ -0.27
TRA2A-212ENST00000621813 KMT2BQ9UMN6 2715 aaPredicted RBP13.38□□□□□ -0.27
TRA2A-212ENST00000621813 SH2D1AO60880 128 aa13.37□□□□□ -0.27
TRA2A-212ENST00000621813 EMP1P54849 157 aa13.37□□□□□ -0.27
TRA2A-212ENST00000621813 SRSF2Q01130 221 aaKnown RBP13.37□□□□□ -0.27
TRA2A-212ENST00000621813 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.37□□□□□ -0.27
TRA2A-212ENST00000621813 Q6ZQT7 251 aa13.37□□□□□ -0.27
TRA2A-212ENST00000621813 MRPL53Q96EL3 112 aaKnown RBP13.37□□□□□ -0.27
TRA2A-212ENST00000621813 UQCRQO14949 82 aa13.37□□□□□ -0.27
TRA2A-212ENST00000621813 MYOZ3Q8TDC0 251 aa13.37□□□□□ -0.27
TRA2A-212ENST00000621813 CSMD1Q96PZ7 3565 aa13.36□□□□□ -0.27
TRA2A-212ENST00000621813 F5H768 121 aa13.36□□□□□ -0.27
TRA2A-212ENST00000621813 MRPL51Q4U2R6 128 aaKnown RBP13.36□□□□□ -0.27
TRA2A-212ENST00000621813 ASCL2Q99929 193 aa13.36□□□□□ -0.27
TRA2A-212ENST00000621813 FAM240AA0A1B0GVK7 77 aa13.35□□□□□ -0.27
TRA2A-212ENST00000621813 LGALS1P09382 135 aaKnown RBP13.35□□□□□ -0.27
TRA2A-212ENST00000621813 LY6EQ16553 131 aa13.35□□□□□ -0.27
TRA2A-212ENST00000621813 COX6B1P14854 86 aa13.35□□□□□ -0.27
TRA2A-212ENST00000621813 LEPP41159 167 aa13.35□□□□□ -0.27
TRA2A-212ENST00000621813 C10orf126Q8N4M7 172 aa13.35□□□□□ -0.27
TRA2A-212ENST00000621813 TMEM160Q9NX00 188 aa13.35□□□□□ -0.27
TRA2A-212ENST00000621813 TMSB15BA0A087X1C1 80 aa13.34□□□□□ -0.27
TRA2A-212ENST00000621813 HLA-DMBP28068 263 aa13.34□□□□□ -0.27
TRA2A-212ENST00000621813 CKS2P33552 79 aa13.34□□□□□ -0.27
TRA2A-212ENST00000621813 HERVK_113P63121 156 aa13.34□□□□□ -0.27
TRA2A-212ENST00000621813 LINC01356Q8N9X3 169 aa13.34□□□□□ -0.27
TRA2A-212ENST00000621813 LINC00526Q96FQ7 95 aa13.34□□□□□ -0.27
TRA2A-212ENST00000621813 LINC00527Q9UJ94 153 aa13.34□□□□□ -0.27
TRA2A-212ENST00000621813 ZNF580Q9UK33 172 aa13.34□□□□□ -0.27
TRA2A-212ENST00000621813 NDUFA4O00483 81 aa13.33□□□□□ -0.28
TRA2A-212ENST00000621813 IGFL4Q6B9Z1 124 aa13.33□□□□□ -0.28
TRA2A-212ENST00000621813 Q8N1Y9 231 aa13.33□□□□□ -0.28
TRA2A-212ENST00000621813 ZFYVE26Q68DK2 2539 aa13.33□□□□□ -0.28
TRA2A-212ENST00000621813 LOC107984640A0A0U1RRK4 108 aa13.33□□□□□ -0.28
TRA2A-212ENST00000621813 J3QLI3 93 aa13.33□□□□□ -0.28
TRA2A-212ENST00000621813 Q8TAT8 98 aa13.33□□□□□ -0.28
TRA2A-212ENST00000621813 COL12A1Q99715 3063 aa13.32□□□□□ -0.28
TRA2A-212ENST00000621813 PRB4P10163 310 aaPredicted RBP13.32□□□□□ -0.28
TRA2A-212ENST00000621813 CHCHD5Q9BSY4 110 aa13.32□□□□□ -0.28
TRA2A-212ENST00000621813 IGHV3-66A0A0C4DH42 116 aa13.31□□□□□ -0.28
TRA2A-212ENST00000621813 FXYD7P58549 80 aa13.31□□□□□ -0.28
TRA2A-212ENST00000621813 LYZL1Q6UWQ5 148 aa13.31□□□□□ -0.28
TRA2A-212ENST00000621813 NDUFA11Q86Y39 141 aa13.31□□□□□ -0.28
TRA2A-212ENST00000621813 SPTAN1Q13813 2472 aaKnown RBP13.31□□□□□ -0.28
TRA2A-212ENST00000621813 WFDC3Q8IUB2 231 aa13.31□□□□□ -0.28
TRA2A-212ENST00000621813 AMN1Q8IY45 258 aa13.31□□□□□ -0.28
TRA2A-212ENST00000621813 AVPP01185 164 aa13.3□□□□□ -0.28
TRA2A-212ENST00000621813 CD7P09564 240 aa13.3□□□□□ -0.28
TRA2A-212ENST00000621813 C9orf139Q6ZV77 190 aa13.3□□□□□ -0.28
TRA2A-212ENST00000621813 RNF182Q8N6D2 247 aa13.3□□□□□ -0.28
TRA2A-212ENST00000621813 KIR2DL5BQ8NHK3 375 aa13.3□□□□□ -0.28
TRA2A-212ENST00000621813 MRPL35Q9NZE8 188 aaKnown RBP13.3□□□□□ -0.28
TRA2A-212ENST00000621813 SVEP1Q4LDE5 3571 aa13.29□□□□□ -0.28
TRA2A-212ENST00000621813 TRAV12-1A0A0B4J245 112 aa13.29□□□□□ -0.28
TRA2A-212ENST00000621813 LGALS9O00182 355 aa13.29□□□□□ -0.28
TRA2A-212ENST00000621813 IGLV1-40P01703 118 aa13.29□□□□□ -0.28
TRA2A-212ENST00000621813 IGLC6P0CF74 106 aa13.29□□□□□ -0.28
TRA2A-212ENST00000621813 ZNF80P51504 273 aaPredicted RBP13.29□□□□□ -0.28
TRA2A-212ENST00000621813 IGHV3OR16-13A0A075B7E8 117 aa13.29□□□□□ -0.28
TRA2A-212ENST00000621813 IGHV3-74A0A0B4J1X5 117 aa13.29□□□□□ -0.28
TRA2A-212ENST00000621813 PRAC2D3DTV9 90 aa13.29□□□□□ -0.28
TRA2A-212ENST00000621813 BLCAPP62952 87 aa13.29□□□□□ -0.28
TRA2A-212ENST00000621813 USP9XQ93008 2570 aaPredicted RBP13.29□□□□□ -0.28
TRA2A-212ENST00000621813 A0A096LNT2 108 aa13.28□□□□□ -0.28
TRA2A-212ENST00000621813 IGHV3-49A0A0A0MS15 119 aa13.28□□□□□ -0.28
TRA2A-212ENST00000621813 ERCC8Q13216 396 aa13.28□□□□□ -0.28
TRA2A-212ENST00000621813 C9orf47Q6ZRZ4 202 aa13.28□□□□□ -0.28
TRA2A-212ENST00000621813 FLNCQ14315 2725 aa13.28□□□□□ -0.28
TRA2A-212ENST00000621813 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.28□□□□□ -0.288e-11■■■□□ 14.9
TRA2A-212ENST00000621813 H7C1H1 209 aa13.27□□□□□ -0.28
TRA2A-212ENST00000621813 P0DMU3 169 aa13.27□□□□□ -0.28
TRA2A-212ENST00000621813 FAM231AP0DMU4 169 aa13.27□□□□□ -0.28
TRA2A-212ENST00000621813 FAM231CP0DMU5 169 aa13.27□□□□□ -0.28
TRA2A-212ENST00000621813 SRSF9Q13242 221 aaKnown RBP eCLIP13.27□□□□□ -0.28
TRA2A-212ENST00000621813 NTN5Q8WTR8 489 aaPredicted RBP13.27□□□□□ -0.28
TRA2A-212ENST00000621813 C16orf92Q96LL3 132 aa13.27□□□□□ -0.28
TRA2A-212ENST00000621813 H3BMM0 161 aa13.27□□□□□ -0.29
TRA2A-212ENST00000621813 ORM1P02763 201 aa13.27□□□□□ -0.29
TRA2A-212ENST00000621813 CFHR3Q02985 330 aa13.27□□□□□ -0.29
TRA2A-212ENST00000621813 UBE2WQ96B02 151 aa13.27□□□□□ -0.29
TRA2A-212ENST00000621813 CNFNQ9BYD5 112 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 214.9 ms