RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 LY96Q9Y6Y9 160 aa7.43□□□□□ -1.22
TARDBP-223ENST00000620632 FAT2Q9NYQ8 4349 aa7.43□□□□□ -1.22
TARDBP-223ENST00000620632 EPPK1P58107 5090 aaKnown RBP7.42□□□□□ -1.22
TARDBP-223ENST00000620632 TRBV6-4A0A1B0GX49 114 aa7.42□□□□□ -1.22
TARDBP-223ENST00000620632 CIDEAO60543 219 aa7.42□□□□□ -1.22
TARDBP-223ENST00000620632 PEA15Q15121 130 aa7.42□□□□□ -1.22
TARDBP-223ENST00000620632 MRPL23Q16540 153 aaKnown RBP7.42□□□□□ -1.22
TARDBP-223ENST00000620632 CLLU1Q5K131 121 aa7.42□□□□□ -1.22
TARDBP-223ENST00000620632 SPANXN1Q5VSR9 72 aa7.42□□□□□ -1.22
TARDBP-223ENST00000620632 LYPD5Q6UWN5 251 aa7.42□□□□□ -1.22
TARDBP-223ENST00000620632 LYZL1Q6UWQ5 148 aa7.42□□□□□ -1.22
TARDBP-223ENST00000620632 FAM231DQ6ZW35 169 aa7.42□□□□□ -1.22
TARDBP-223ENST00000620632 GTSF1Q8WW33 167 aa7.42□□□□□ -1.22
TARDBP-223ENST00000620632 MRPS16Q9Y3D3 137 aaKnown RBP7.42□□□□□ -1.22
TARDBP-223ENST00000620632 DNAH17Q9UFH2 4485 aa7.41□□□□□ -1.22
TARDBP-223ENST00000620632 LINC00694P0DN24 101 aa7.41□□□□□ -1.22
TARDBP-223ENST00000620632 SRIP30626 198 aa7.41□□□□□ -1.22
TARDBP-223ENST00000620632 CTRLP40313 264 aa7.41□□□□□ -1.22
TARDBP-223ENST00000620632 FAM3BP58499 235 aaPredicted RBP7.41□□□□□ -1.22
TARDBP-223ENST00000620632 RPL23P62829 140 aaKnown RBP7.41□□□□□ -1.22
TARDBP-223ENST00000620632 RHOHQ15669 191 aa7.41□□□□□ -1.22
TARDBP-223ENST00000620632 Q6ZR54 194 aa7.41□□□□□ -1.22
TARDBP-223ENST00000620632 NEGR1Q7Z3B1 354 aa7.41□□□□□ -1.22
TARDBP-223ENST00000620632 UPK3BQ9BT76 320 aa7.41□□□□□ -1.22
TARDBP-223ENST00000620632 SMDT1Q9H4I9 107 aa7.41□□□□□ -1.22
TARDBP-223ENST00000620632 KIF25-AS1Q9Y6Z4 181 aa7.41□□□□□ -1.22
TARDBP-223ENST00000620632 RHODO00212 210 aa7.4□□□□□ -1.22
TARDBP-223ENST00000620632 GATCO43716 136 aaKnown RBP7.4□□□□□ -1.22
TARDBP-223ENST00000620632 LINC00315P59091 139 aa7.4□□□□□ -1.22
TARDBP-223ENST00000620632 ERVFC1-1P60608 527 aa7.4□□□□□ -1.22
TARDBP-223ENST00000620632 RAB14P61106 215 aa7.4□□□□□ -1.22
TARDBP-223ENST00000620632 ISOC2Q96AB3 205 aa7.4□□□□□ -1.22
TARDBP-223ENST00000620632 PRADC1Q9BSG0 188 aa7.4□□□□□ -1.22
TARDBP-223ENST00000620632 KRTAP1-5Q9BYS1 174 aa7.4□□□□□ -1.22
TARDBP-223ENST00000620632 XKRY2A2RUG3 117 aa7.39□□□□□ -1.23
TARDBP-223ENST00000620632 GAGE12JA6NER3 117 aa7.39□□□□□ -1.23
TARDBP-223ENST00000620632 GAGE1Q13065 139 aa7.39□□□□□ -1.23
TARDBP-223ENST00000620632 GAGE4Q13068 117 aa7.39□□□□□ -1.23
TARDBP-223ENST00000620632 GAGE5Q13069 117 aa7.39□□□□□ -1.23
TARDBP-223ENST00000620632 TMEM241Q24JQ0 296 aa7.39□□□□□ -1.23
TARDBP-223ENST00000620632 GAGE13Q4V321 117 aa7.39□□□□□ -1.23
TARDBP-223ENST00000620632 FAM74A3Q4VXF1 159 aa7.39□□□□□ -1.23
TARDBP-223ENST00000620632 CNFNQ9BYD5 112 aa7.39□□□□□ -1.23
TARDBP-223ENST00000620632 Q9H8V8 135 aa7.39□□□□□ -1.23
TARDBP-223ENST00000620632 OSTCQ9NRP0 149 aa7.39□□□□□ -1.23
TARDBP-223ENST00000620632 NAT8Q9UHE5 227 aa7.39□□□□□ -1.23
TARDBP-223ENST00000620632 V9GYV3 84 aa7.39□□□□□ -1.23
TARDBP-223ENST00000620632 A0A1W2PPQ1 181 aa7.38□□□□□ -1.23
TARDBP-223ENST00000620632 F2Z2F3 143 aa7.38□□□□□ -1.23
TARDBP-223ENST00000620632 NTF3P20783 257 aa7.38□□□□□ -1.23
TARDBP-223ENST00000620632 CACNG7P62955 275 aa7.38□□□□□ -1.23
TARDBP-223ENST00000620632 ADIRFQ15847 76 aa7.38□□□□□ -1.23
TARDBP-223ENST00000620632 CT83Q5H943 113 aa7.38□□□□□ -1.23
TARDBP-223ENST00000620632 SOHLH1Q5JUK2 328 aa7.38□□□□□ -1.23
TARDBP-223ENST00000620632 WFDC10BQ8IUB3 73 aa7.38□□□□□ -1.23
TARDBP-223ENST00000620632 AP1S3Q96PC3 154 aa7.38□□□□□ -1.23
TARDBP-223ENST00000620632 NBDYA0A0U1RRE5 68 aa7.37□□□□□ -1.23
TARDBP-223ENST00000620632 EVI2AP22794 236 aa7.37□□□□□ -1.23
TARDBP-223ENST00000620632 RAB4BP61018 213 aa7.37□□□□□ -1.23
TARDBP-223ENST00000620632 ZNF56Q15929 161 aa7.37□□□□□ -1.23
TARDBP-223ENST00000620632 PGLYRP4Q96LB8 373 aa7.37□□□□□ -1.23
TARDBP-223ENST00000620632 A8MWL6 223 aa7.36□□□□□ -1.23
TARDBP-223ENST00000620632 RTL8CO15255 209 aa7.36□□□□□ -1.23
TARDBP-223ENST00000620632 FOXA3P55318 350 aaPredicted RBP7.36□□□□□ -1.23
TARDBP-223ENST00000620632 WDR73Q6P4I2 378 aa7.36□□□□□ -1.23
TARDBP-223ENST00000620632 NEXN-AS1Q8NBZ9 246 aa7.36□□□□□ -1.23
TARDBP-223ENST00000620632 ATP6V0E2Q8NHE4 81 aa7.36□□□□□ -1.23
TARDBP-223ENST00000620632 TSKUQ8WUA8 353 aa7.36□□□□□ -1.23
TARDBP-223ENST00000620632 HIGD1CA8MV81 97 aa7.35□□□□□ -1.23
TARDBP-223ENST00000620632 SIVA1O15304 175 aa7.35□□□□□ -1.23
TARDBP-223ENST00000620632 MGPP08493 103 aa7.35□□□□□ -1.23
TARDBP-223ENST00000620632 ADCYAP1P18509 176 aa7.35□□□□□ -1.23
TARDBP-223ENST00000620632 TIRAPP58753 221 aa7.35□□□□□ -1.23
TARDBP-223ENST00000620632 TWIST1Q15672 202 aa7.35□□□□□ -1.23
TARDBP-223ENST00000620632 SUMO4Q6EEV6 95 aa7.35□□□□□ -1.23
TARDBP-223ENST00000620632 SH2D6Q7Z4S9 175 aa7.35□□□□□ -1.23
TARDBP-223ENST00000620632 OR10G8Q8NGN5 311 aa7.35□□□□□ -1.23
TARDBP-223ENST00000620632 GTSF1LQ9H1H1 148 aa7.35□□□□□ -1.23
TARDBP-223ENST00000620632 TRBV10-1A0A0K0K1A3 114 aa7.34□□□□□ -1.23
TARDBP-223ENST00000620632 F5H697 171 aa7.34□□□□□ -1.23
TARDBP-223ENST00000620632 M0QY20 66 aa7.34□□□□□ -1.23
TARDBP-223ENST00000620632 TRGC1P0CF51 173 aa7.34□□□□□ -1.23
TARDBP-223ENST00000620632 SMIM17P0DL12 118 aa7.34□□□□□ -1.23
TARDBP-223ENST00000620632 UBE2D3P61077 147 aa7.34□□□□□ -1.23
TARDBP-223ENST00000620632 UBE2D2P62837 147 aa7.34□□□□□ -1.23
TARDBP-223ENST00000620632 Q8N3U1 123 aa7.34□□□□□ -1.23
TARDBP-223ENST00000620632 C15orf54Q8N8G6 183 aa7.34□□□□□ -1.23
TARDBP-223ENST00000620632 NUP35Q8NFH5 326 aa7.34□□□□□ -1.23
TARDBP-223ENST00000620632 GFRA4Q9GZZ7 299 aa7.34□□□□□ -1.23
TARDBP-223ENST00000620632 DPH3P1Q9H4G8 78 aa7.34□□□□□ -1.23
TARDBP-223ENST00000620632 HECTD4Q9Y4D8 3996 aa7.34□□□□□ -1.23
TARDBP-223ENST00000620632 PKD1P98161 4303 aa7.34□□□□□ -1.23
TARDBP-223ENST00000620632 DNAH11Q96DT5 4516 aa7.34□□□□□ -1.23
TARDBP-223ENST00000620632 TRBV7-3A0A075B6L6 115 aa7.33□□□□□ -1.24
TARDBP-223ENST00000620632 LELP1Q5T871 98 aa7.33□□□□□ -1.24
TARDBP-223ENST00000620632 TRAV26-2A0A0B4J265 109 aa7.32□□□□□ -1.24
TARDBP-223ENST00000620632 IGHV3-38A0A0C4DH36 116 aa7.32□□□□□ -1.24
TARDBP-223ENST00000620632 SMIM27A0A1W2PRY6 76 aa7.32□□□□□ -1.24
TARDBP-223ENST00000620632 FAM231BA6NCW3 169 aa7.32□□□□□ -1.24
TARDBP-223ENST00000620632 DNAH10OSP0CZ25 163 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms