RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 MRAP2Q96G30 205 aa15.38■□□□□ 0.05
SSBP3-216ENST00000610401 BEX4Q9NWD9 120 aaPredicted RBP15.38■□□□□ 0.05
SSBP3-216ENST00000610401 J3QR89 54 aa15.37■□□□□ 0.05
SSBP3-216ENST00000610401 RNASE13Q5GAN3 156 aaKnown RBP15.37■□□□□ 0.05
SSBP3-216ENST00000610401 FAM159AQ6UWV7 190 aa15.37■□□□□ 0.05
SSBP3-216ENST00000610401 C9orf139Q6ZV77 190 aa15.37■□□□□ 0.05
SSBP3-216ENST00000610401 LINC01546A6NGU7 62 aa15.37■□□□□ 0.05
SSBP3-216ENST00000610401 C19orf84I3L1E1 186 aa15.37■□□□□ 0.05
SSBP3-216ENST00000610401 PIFOQ8TCI5 191 aa15.36■□□□□ 0.05
SSBP3-216ENST00000610401 ZNF56Q15929 161 aa15.36■□□□□ 0.05
SSBP3-216ENST00000610401 MXRA5Q9NR99 2828 aa15.36■□□□□ 0.05
SSBP3-216ENST00000610401 TSPEAR-AS2P59090 65 aa15.36■□□□□ 0.05
SSBP3-216ENST00000610401 JMJD1CQ15652 2540 aa15.36■□□□□ 0.05
SSBP3-216ENST00000610401 LRRK2Q5S007 2527 aa15.35■□□□□ 0.05
SSBP3-216ENST00000610401 C1orf122Q6ZSJ8 110 aa15.35■□□□□ 0.05
SSBP3-216ENST00000610401 ZNF580Q9UK33 172 aa15.35■□□□□ 0.05
SSBP3-216ENST00000610401 PKD1L2Q7Z442 2459 aa15.35■□□□□ 0.05
SSBP3-216ENST00000610401 CRYGDP07320 174 aa15.35■□□□□ 0.05
SSBP3-216ENST00000610401 NPC2P61916 151 aa15.35■□□□□ 0.05
SSBP3-216ENST00000610401 NIPBLQ6KC79 2804 aaeCLIP15.35■□□□□ 0.05
SSBP3-216ENST00000610401 CCDC168Q8NDH2 2452 aa15.35■□□□□ 0.05
SSBP3-216ENST00000610401 MDFICQ9P1T7 246 aa15.34■□□□□ 0.05
SSBP3-216ENST00000610401 TSPAN13O95857 204 aa15.34■□□□□ 0.05
SSBP3-216ENST00000610401 TSHBP01222 138 aa15.34■□□□□ 0.05
SSBP3-216ENST00000610401 MOB4Q9Y3A3 225 aa15.34■□□□□ 0.05
SSBP3-216ENST00000610401 EPG5Q9HCE0 2579 aa15.34■□□□□ 0.05
SSBP3-216ENST00000610401 RNF223E7ERA6 249 aa15.34■□□□□ 0.05
SSBP3-216ENST00000610401 SUMO4Q6EEV6 95 aa15.34■□□□□ 0.05
SSBP3-216ENST00000610401 NFE4Q86UQ8 179 aa15.34■□□□□ 0.05
SSBP3-216ENST00000610401 SDHAF1A6NFY7 115 aa15.33■□□□□ 0.04
SSBP3-216ENST00000610401 FBXL19-AS1Q494R0 122 aa15.33■□□□□ 0.04
SSBP3-216ENST00000610401 ITLN2Q8WWU7 325 aaPredicted RBP15.33■□□□□ 0.04
SSBP3-216ENST00000610401 PSMG4Q5JS54 123 aa15.33■□□□□ 0.04
SSBP3-216ENST00000610401 MAPK1IP1LQ8NDC0 245 aa15.33■□□□□ 0.04
SSBP3-216ENST00000610401 KIR2DL4Q99706 377 aa15.33■□□□□ 0.04
SSBP3-216ENST00000610401 SMCPP49901 116 aaPredicted RBP15.32■□□□□ 0.04
SSBP3-216ENST00000610401 KLRB1Q12918 225 aa15.32■□□□□ 0.04
SSBP3-216ENST00000610401 TRAV2A0A0B4J234 112 aa15.32■□□□□ 0.04
SSBP3-216ENST00000610401 IGHV4-61A0A0C4DH41 118 aa15.32■□□□□ 0.04
SSBP3-216ENST00000610401 NF1P21359 2839 aa15.31■□□□□ 0.04
SSBP3-216ENST00000610401 TMEM190Q8WZ59 177 aa15.31■□□□□ 0.04
SSBP3-216ENST00000610401 U3KQE9 123 aa15.31■□□□□ 0.04
SSBP3-216ENST00000610401 SPINK13Q1W4C9 94 aa15.31■□□□□ 0.04
SSBP3-216ENST00000610401 PRO0461Q9UI25 63 aa15.3■□□□□ 0.04
SSBP3-216ENST00000610401 ZNRF2Q8NHG8 242 aa15.3■□□□□ 0.04
SSBP3-216ENST00000610401 NRGNQ92686 78 aa15.3■□□□□ 0.04
SSBP3-216ENST00000610401 NAV2Q8IVL1 2488 aa15.3■□□□□ 0.04
SSBP3-216ENST00000610401 TRAV12-1A0A0B4J245 112 aa15.3■□□□□ 0.04
SSBP3-216ENST00000610401 CEMP1Q6PRD7 247 aaPredicted RBP15.3■□□□□ 0.04
SSBP3-216ENST00000610401 CLUHP3Q96NS8 147 aa15.3■□□□□ 0.04
SSBP3-216ENST00000610401 DLX4Q92988 240 aaPredicted RBP15.29■□□□□ 0.04
SSBP3-216ENST00000610401 KNCNA6PVL3 124 aa15.29■□□□□ 0.04
SSBP3-216ENST00000610401 P0DMU3 169 aa15.29■□□□□ 0.04
SSBP3-216ENST00000610401 FAM231AP0DMU4 169 aa15.29■□□□□ 0.04
SSBP3-216ENST00000610401 FAM231CP0DMU5 169 aa15.29■□□□□ 0.04
SSBP3-216ENST00000610401 Q1RN00 199 aa15.29■□□□□ 0.04
SSBP3-216ENST00000610401 IGHV4-4A0A075B6R2 117 aa15.28■□□□□ 0.04
SSBP3-216ENST00000610401 OVOL1O14753 267 aa15.28■□□□□ 0.04
SSBP3-216ENST00000610401 TCL1BO95988 128 aa15.28■□□□□ 0.04
SSBP3-216ENST00000610401 IGHV4-39P01824 125 aa15.28■□□□□ 0.04
SSBP3-216ENST00000610401 MT-ATP8P03928 68 aa15.28■□□□□ 0.04
SSBP3-216ENST00000610401 IGLV4-69A0A075B6H9 119 aa15.28■□□□□ 0.04
SSBP3-216ENST00000610401 TAL2Q16559 108 aa15.28■□□□□ 0.04
SSBP3-216ENST00000610401 TRPT1Q86TN4 253 aaKnown RBP15.28■□□□□ 0.04
SSBP3-216ENST00000610401 PRSS2P07478 247 aa15.27■□□□□ 0.03
SSBP3-216ENST00000610401 FOXI1Q12951 378 aa15.27■□□□□ 0.03
SSBP3-216ENST00000610401 FHL3Q13643 280 aa15.27■□□□□ 0.03
SSBP3-216ENST00000610401 CHD6Q8TD26 2715 aa15.26■□□□□ 0.03
SSBP3-216ENST00000610401 TMEM238LA0A1B0GVL6 79 aa15.26■□□□□ 0.03
SSBP3-216ENST00000610401 A6NJY4 79 aa15.26■□□□□ 0.03
SSBP3-216ENST00000610401 CKS1BP61024 79 aa15.26■□□□□ 0.03
SSBP3-216ENST00000610401 IGHV1-69DA0A0B4J2H0 117 aa15.26■□□□□ 0.03
SSBP3-216ENST00000610401 IGHV1-69P01742 117 aa15.26■□□□□ 0.03
SSBP3-216ENST00000610401 A0A0J9YY99 117 aa15.26■□□□□ 0.03
SSBP3-216ENST00000610401 CRIP2P52943 208 aaPredicted RBP15.26■□□□□ 0.03
SSBP3-216ENST00000610401 MRPL53Q96EL3 112 aaKnown RBP15.26■□□□□ 0.03
SSBP3-216ENST00000610401 LGALS3P17931 250 aaKnown RBP15.25■□□□□ 0.03
SSBP3-216ENST00000610401 PROK1P58294 105 aa15.25■□□□□ 0.03
SSBP3-216ENST00000610401 HERVK_113P61574 105 aa15.25■□□□□ 0.03
SSBP3-216ENST00000610401 SPXQ9BT56 116 aa15.25■□□□□ 0.03
SSBP3-216ENST00000610401 NDUFA4O00483 81 aa15.25■□□□□ 0.03
SSBP3-216ENST00000610401 SOCS3O14543 225 aa15.25■□□□□ 0.03
SSBP3-216ENST00000610401 SPINK8P0C7L1 97 aa15.25■□□□□ 0.03
SSBP3-216ENST00000610401 PMVKQ15126 192 aa15.25■□□□□ 0.03
SSBP3-216ENST00000610401 CFC1BP0CG36 223 aa15.24■□□□□ 0.03
SSBP3-216ENST00000610401 CFC1P0CG37 223 aa15.24■□□□□ 0.03
SSBP3-216ENST00000610401 FAM223BA6NKX1 122 aa15.24■□□□□ 0.03
SSBP3-216ENST00000610401 A8MZ25 164 aa15.24■□□□□ 0.03
SSBP3-216ENST00000610401 NDUFA11Q86Y39 141 aa15.24■□□□□ 0.03
SSBP3-216ENST00000610401 FAM223AQ8IWN6 122 aa15.24■□□□□ 0.03
SSBP3-216ENST00000610401 CFAP126Q5VTH2 177 aa15.24■□□□□ 0.03
SSBP3-216ENST00000610401 TEX15Q9BXT5 2789 aa15.23■□□□□ 0.03
SSBP3-216ENST00000610401 A0A0J9YXV3 536 aa15.23■□□□□ 0.03
SSBP3-216ENST00000610401 PRSS47A8MTI9 375 aa15.23■□□□□ 0.03
SSBP3-216ENST00000610401 LINC00315P59091 139 aa15.23■□□□□ 0.03
SSBP3-216ENST00000610401 Q8N1Y9 231 aa15.23■□□□□ 0.03
SSBP3-216ENST00000610401 DAZ1Q9NQZ3 744 aaKnown RBP15.23■□□□□ 0.03
SSBP3-216ENST00000610401 Q9UF83 564 aa15.23■□□□□ 0.03
SSBP3-216ENST00000610401 ANKRD17O75179 2603 aaKnown RBP15.23■□□□□ 0.03
SSBP3-216ENST00000610401 COX6B1P14854 86 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms