RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 SH2D6Q7Z4S9 175 aa8.3□□□□□ -1.08
CTSA-210ENST00000606000 BAGE2Q86Y30 109 aa8.3□□□□□ -1.08
CTSA-210ENST00000606000 SYT8Q8NBV8 401 aa8.3□□□□□ -1.08
CTSA-210ENST00000606000 ATP6V0E2Q8NHE4 81 aa8.3□□□□□ -1.08
CTSA-210ENST00000606000 MANBALQ9NQG1 85 aa8.3□□□□□ -1.08
CTSA-210ENST00000606000 MSRB1Q9NZV6 116 aa8.3□□□□□ -1.08
CTSA-210ENST00000606000 PHLDA3Q9Y5J5 127 aa8.3□□□□□ -1.08
CTSA-210ENST00000606000 IGHV3-38A0A0C4DH36 116 aa8.29□□□□□ -1.08
CTSA-210ENST00000606000 MUC21A0A0G2JKD1 596 aa8.29□□□□□ -1.08
CTSA-210ENST00000606000 MUC21A0A140T8X8 626 aa8.29□□□□□ -1.08
CTSA-210ENST00000606000 IGHV3-30P01768 117 aa8.29□□□□□ -1.08
CTSA-210ENST00000606000 IGHV3-33P01772 117 aa8.29□□□□□ -1.08
CTSA-210ENST00000606000 IGHV3-30-3P0DP02 117 aa8.29□□□□□ -1.08
CTSA-210ENST00000606000 IGHV3-30-5P0DP03 117 aa8.29□□□□□ -1.08
CTSA-210ENST00000606000 EVI2AP22794 236 aa8.29□□□□□ -1.08
CTSA-210ENST00000606000 BLOC1S1P78537 153 aa8.29□□□□□ -1.08
CTSA-210ENST00000606000 OR10J3Q5JRS4 329 aa8.29□□□□□ -1.08
CTSA-210ENST00000606000 PIK3CD-AS1Q5SR53 167 aa8.29□□□□□ -1.08
CTSA-210ENST00000606000 OR10AG1Q8NH19 301 aa8.29□□□□□ -1.08
CTSA-210ENST00000606000 C11orf52Q96A22 123 aa8.29□□□□□ -1.08
CTSA-210ENST00000606000 LRP1BQ9NZR2 4599 aa8.29□□□□□ -1.08
CTSA-210ENST00000606000 DNAH5Q8TE73 4624 aa8.28□□□□□ -1.08
CTSA-210ENST00000606000 TRAV9-2A0A087WT02 112 aa8.28□□□□□ -1.08
CTSA-210ENST00000606000 ATP6V1G1O75348 118 aa8.28□□□□□ -1.08
CTSA-210ENST00000606000 S100A9P06702 114 aaKnown RBP8.28□□□□□ -1.08
CTSA-210ENST00000606000 BCL2P10415 239 aa8.28□□□□□ -1.08
CTSA-210ENST00000606000 CENPWQ5EE01 88 aa8.28□□□□□ -1.08
CTSA-210ENST00000606000 LELP1Q5T871 98 aa8.28□□□□□ -1.08
CTSA-210ENST00000606000 SFRP2Q96HF1 295 aa8.28□□□□□ -1.08
CTSA-210ENST00000606000 GTSF1LQ9H1H1 148 aa8.28□□□□□ -1.08
CTSA-210ENST00000606000 TRAV8-6A0A0B4J262 113 aa8.27□□□□□ -1.09
CTSA-210ENST00000606000 RAB19A4D1S5 217 aa8.27□□□□□ -1.09
CTSA-210ENST00000606000 RHODO00212 210 aa8.27□□□□□ -1.09
CTSA-210ENST00000606000 IFNA1P01562 189 aa8.27□□□□□ -1.09
CTSA-210ENST00000606000 IGLV2-8P01709 118 aa8.27□□□□□ -1.09
CTSA-210ENST00000606000 LINC01556Q5JQF7 62 aa8.27□□□□□ -1.09
CTSA-210ENST00000606000 ZFP82Q8N141 532 aa8.27□□□□□ -1.09
CTSA-210ENST00000606000 KRTAP4-5Q9BYR2 181 aa8.27□□□□□ -1.09
CTSA-210ENST00000606000 A0A087WTM6 91 aa8.26□□□□□ -1.09
CTSA-210ENST00000606000 ERVFC1-1P60608 527 aa8.26□□□□□ -1.09
CTSA-210ENST00000606000 SSTP61278 116 aa8.26□□□□□ -1.09
CTSA-210ENST00000606000 MEF2BQ02080 365 aaPredicted RBP8.26□□□□□ -1.09
CTSA-210ENST00000606000 NFE4Q86UQ8 179 aa8.26□□□□□ -1.09
CTSA-210ENST00000606000 Q9HAA7 133 aa8.26□□□□□ -1.09
CTSA-210ENST00000606000 PCLOQ9Y6V0 5065 aa8.26□□□□□ -1.09
CTSA-210ENST00000606000 TRBV20OR9-2A0A075B6H5 130 aa8.25□□□□□ -1.09
CTSA-210ENST00000606000 SNAI2O43623 268 aa8.25□□□□□ -1.09
CTSA-210ENST00000606000 GZMBP10144 247 aa8.25□□□□□ -1.09
CTSA-210ENST00000606000 TOR2AQ5JU69 321 aa8.25□□□□□ -1.09
CTSA-210ENST00000606000 C10orf126Q8N4M7 172 aa8.25□□□□□ -1.09
CTSA-210ENST00000606000 LYPD6BQ8NI32 183 aa8.25□□□□□ -1.09
CTSA-210ENST00000606000 VAX2Q9UIW0 290 aa8.25□□□□□ -1.09
CTSA-210ENST00000606000 APOBP04114 4563 aaKnown RBP8.25□□□□□ -1.09
CTSA-210ENST00000606000 RBFOX3A6NFN3 312 aa8.24□□□□□ -1.09
CTSA-210ENST00000606000 IBA57-AS1B1ANH7 110 aa8.24□□□□□ -1.09
CTSA-210ENST00000606000 K7EP13 123 aa8.24□□□□□ -1.09
CTSA-210ENST00000606000 CDK2AP2O75956 126 aa8.24□□□□□ -1.09
CTSA-210ENST00000606000 CXCL1P09341 107 aa8.24□□□□□ -1.09
CTSA-210ENST00000606000 SMCPP49901 116 aaPredicted RBP8.24□□□□□ -1.09
CTSA-210ENST00000606000 IFITM2Q01629 132 aa8.24□□□□□ -1.09
CTSA-210ENST00000606000 SSBP4Q9BWG4 385 aaPredicted RBP8.24□□□□□ -1.09
CTSA-210ENST00000606000 HSPG2P98160 4391 aa8.23□□□□□ -1.09
CTSA-210ENST00000606000 CEBPGP53567 150 aa8.23□□□□□ -1.09
CTSA-210ENST00000606000 ZNF56Q15929 161 aa8.23□□□□□ -1.09
CTSA-210ENST00000606000 DAZ4Q86SG3 579 aaKnown RBP8.23□□□□□ -1.09
CTSA-210ENST00000606000 DAZ3Q9NR90 486 aaKnown RBP8.23□□□□□ -1.09
CTSA-210ENST00000606000 MED9Q9NWA0 146 aa8.23□□□□□ -1.09
CTSA-210ENST00000606000 ABCA13Q86UQ4 5058 aa8.22□□□□□ -1.09
CTSA-210ENST00000606000 C19orf71A6NCJ1 209 aa8.22□□□□□ -1.09
CTSA-210ENST00000606000 J3QL48 77 aa8.22□□□□□ -1.09
CTSA-210ENST00000606000 PDE6DO43924 150 aa8.22□□□□□ -1.09
CTSA-210ENST00000606000 OR5AL1P0C617 328 aa8.22□□□□□ -1.09
CTSA-210ENST00000606000 GNG4P50150 75 aa8.22□□□□□ -1.09
CTSA-210ENST00000606000 SPANXN1Q5VSR9 72 aa8.22□□□□□ -1.09
CTSA-210ENST00000606000 DNAJC30Q96LL9 226 aa8.22□□□□□ -1.09
CTSA-210ENST00000606000 TPPP3Q9BW30 176 aa8.22□□□□□ -1.09
CTSA-210ENST00000606000 EIF5A2Q9GZV4 153 aaKnown RBP8.22□□□□□ -1.09
CTSA-210ENST00000606000 LRCOL1A6NCL2 159 aa8.21□□□□□ -1.1
CTSA-210ENST00000606000 EREGO14944 169 aa8.21□□□□□ -1.1
CTSA-210ENST00000606000 IGLC6P0CF74 106 aa8.21□□□□□ -1.1
CTSA-210ENST00000606000 UBE2D3P61077 147 aa8.21□□□□□ -1.1
CTSA-210ENST00000606000 UBE2D2P62837 147 aa8.21□□□□□ -1.1
CTSA-210ENST00000606000 MAPKAPK5-AS1Q8N8E1 139 aa8.21□□□□□ -1.1
CTSA-210ENST00000606000 NEXN-AS1Q8NBZ9 246 aa8.21□□□□□ -1.1
CTSA-210ENST00000606000 OR2D3Q8NGH3 330 aa8.21□□□□□ -1.1
CTSA-210ENST00000606000 PSCAO43653 123 aa8.2□□□□□ -1.1
CTSA-210ENST00000606000 TAGLN2P37802 199 aaKnown RBP8.2□□□□□ -1.1
CTSA-210ENST00000606000 RAB4BP61018 213 aa8.2□□□□□ -1.1
CTSA-210ENST00000606000 RPL36AP83881 106 aaKnown RBP8.2□□□□□ -1.1
CTSA-210ENST00000606000 WFDC2Q14508 124 aa8.2□□□□□ -1.1
CTSA-210ENST00000606000 NDUFA5Q16718 116 aa8.2□□□□□ -1.1
CTSA-210ENST00000606000 FER1L6-AS1Q8NA97 138 aa8.2□□□□□ -1.1
CTSA-210ENST00000606000 RPL36ALQ969Q0 106 aaKnown RBP8.2□□□□□ -1.1
CTSA-210ENST00000606000 KIF25-AS1Q9Y6Z4 181 aa8.2□□□□□ -1.1
CTSA-210ENST00000606000 TRBV7-3A0A075B6L6 115 aa8.19□□□□□ -1.1
CTSA-210ENST00000606000 TRBV10-1A0A0K0K1A3 114 aa8.19□□□□□ -1.1
CTSA-210ENST00000606000 K7EN84 100 aa8.19□□□□□ -1.1
CTSA-210ENST00000606000 KRTAP10-1P60331 282 aa8.19□□□□□ -1.1
CTSA-210ENST00000606000 RAB14P61106 215 aa8.19□□□□□ -1.1
CTSA-210ENST00000606000 SRSF3P84103 164 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms