RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 IGHV4OR15-8A0A075B7B6 117 aa13.05□□□□□ -0.32
ARHGEF1-213ENST00000595897 A0A087WW49 117 aa13.05□□□□□ -0.32
ARHGEF1-213ENST00000595897 TCL1BO95988 128 aa13.05□□□□□ -0.32
ARHGEF1-213ENST00000595897 LINC00315P59091 139 aa13.05□□□□□ -0.32
ARHGEF1-213ENST00000595897 TMEM141Q96I45 108 aa13.05□□□□□ -0.32
ARHGEF1-213ENST00000595897 ZNF256Q9Y2P7 627 aaPredicted RBP13.05□□□□□ -0.32
ARHGEF1-213ENST00000595897 KIF25-AS1Q9Y6Z4 181 aa13.05□□□□□ -0.32
ARHGEF1-213ENST00000595897 POLR2KP53803 58 aaKnown RBP13.05□□□□□ -0.32
ARHGEF1-213ENST00000595897 TSPEAR-AS2P59090 65 aa13.05□□□□□ -0.32
ARHGEF1-213ENST00000595897 CFC1BP0CG36 223 aa13.05□□□□□ -0.32
ARHGEF1-213ENST00000595897 CFC1P0CG37 223 aa13.05□□□□□ -0.32
ARHGEF1-213ENST00000595897 LGALS3P17931 250 aaKnown RBP13.05□□□□□ -0.32
ARHGEF1-213ENST00000595897 C19orf54Q5BKX5 351 aa13.05□□□□□ -0.32
ARHGEF1-213ENST00000595897 TCTEX1D4Q5JR98 221 aa13.05□□□□□ -0.32
ARHGEF1-213ENST00000595897 CDIP1Q9H305 208 aa13.05□□□□□ -0.32
ARHGEF1-213ENST00000595897 MUC4Q99102 2169 aa13.04□□□□□ -0.32
ARHGEF1-213ENST00000595897 TRBV20-1A0A075B6N2 111 aa13.04□□□□□ -0.32
ARHGEF1-213ENST00000595897 IGHV3-30P01768 117 aa13.04□□□□□ -0.32
ARHGEF1-213ENST00000595897 IGHV3-30-5P0DP03 117 aa13.04□□□□□ -0.32
ARHGEF1-213ENST00000595897 KLRB1Q12918 225 aa13.04□□□□□ -0.32
ARHGEF1-213ENST00000595897 TEN1Q86WV5 123 aa13.04□□□□□ -0.32
ARHGEF1-213ENST00000595897 PPDPFLQ8WWR9 84 aa13.04□□□□□ -0.32
ARHGEF1-213ENST00000595897 TRAV12-3A0A0B4J271 114 aa13.03□□□□□ -0.32
ARHGEF1-213ENST00000595897 A8MWV9 139 aa13.03□□□□□ -0.32
ARHGEF1-213ENST00000595897 APRG1Q8IVJ8 170 aa13.03□□□□□ -0.32
ARHGEF1-213ENST00000595897 C10orf126Q8N4M7 172 aa13.03□□□□□ -0.32
ARHGEF1-213ENST00000595897 SLC25A29Q8N8R3 303 aa13.03□□□□□ -0.32
ARHGEF1-213ENST00000595897 ZNRF2Q8NHG8 242 aa13.03□□□□□ -0.32
ARHGEF1-213ENST00000595897 TIMM17AQ99595 171 aa13.03□□□□□ -0.32
ARHGEF1-213ENST00000595897 J3QQQ9 107 aa13.03□□□□□ -0.32
ARHGEF1-213ENST00000595897 NXPH4O95158 308 aa13.03□□□□□ -0.32
ARHGEF1-213ENST00000595897 POM121L12Q8N7R1 296 aa13.03□□□□□ -0.32
ARHGEF1-213ENST00000595897 USMG5Q96IX5 58 aa13.03□□□□□ -0.32
ARHGEF1-213ENST00000595897 TRBV7-9A0A0J9YWB2 115 aa13.02□□□□□ -0.32
ARHGEF1-213ENST00000595897 MT-ATP8P03928 68 aa13.02□□□□□ -0.32
ARHGEF1-213ENST00000595897 RPL32P62910 135 aaKnown RBP13.02□□□□□ -0.32
ARHGEF1-213ENST00000595897 CLUHP3Q96NS8 147 aa13.02□□□□□ -0.32
ARHGEF1-213ENST00000595897 PRO1854Q9UHT4 67 aa13.02□□□□□ -0.32
ARHGEF1-213ENST00000595897 RAX2Q96IS3 184 aa13.02□□□□□ -0.33
ARHGEF1-213ENST00000595897 DAZ1Q9NQZ3 744 aaKnown RBP13.02□□□□□ -0.33
ARHGEF1-213ENST00000595897 CELSR1Q9NYQ6 3014 aa13.01□□□□□ -0.33
ARHGEF1-213ENST00000595897 ZFHX3Q15911 3703 aa13.01□□□□□ -0.33
ARHGEF1-213ENST00000595897 GEMIN7Q9H840 131 aaKnown RBP13.01□□□□□ -0.33
ARHGEF1-213ENST00000595897 CRIP2P52943 208 aaPredicted RBP13.01□□□□□ -0.33
ARHGEF1-213ENST00000595897 CRYBA4P53673 196 aa13.01□□□□□ -0.33
ARHGEF1-213ENST00000595897 FHL3Q13643 280 aa13.01□□□□□ -0.33
ARHGEF1-213ENST00000595897 ZNF56Q15929 161 aa13.01□□□□□ -0.33
ARHGEF1-213ENST00000595897 ZNF876PQ49A33 203 aa13.01□□□□□ -0.33
ARHGEF1-213ENST00000595897 KLLNB2CW77 178 aa13□□□□□ -0.33
ARHGEF1-213ENST00000595897 Q6ZUT4 128 aa13□□□□□ -0.33
ARHGEF1-213ENST00000595897 CARD19Q96LW7 228 aa13□□□□□ -0.33
ARHGEF1-213ENST00000595897 H7C2G1 150 aa13□□□□□ -0.33
ARHGEF1-213ENST00000595897 IGHV1-69P01742 117 aa13□□□□□ -0.33
ARHGEF1-213ENST00000595897 ID1P41134 155 aa13□□□□□ -0.33
ARHGEF1-213ENST00000595897 XGP55808 180 aa13□□□□□ -0.33
ARHGEF1-213ENST00000595897 OPRPNQ99935 248 aaPredicted RBP13□□□□□ -0.33
ARHGEF1-213ENST00000595897 IGHV3-64A0A075B6Q5 118 aa12.99□□□□□ -0.33
ARHGEF1-213ENST00000595897 NBL1P41271 181 aa12.99□□□□□ -0.33
ARHGEF1-213ENST00000595897 TRBV27A0A0K0K1C4 114 aa12.99□□□□□ -0.33
ARHGEF1-213ENST00000595897 IGKV3-20P01619 116 aa12.99□□□□□ -0.33
ARHGEF1-213ENST00000595897 HIVEP3Q5T1R4 2406 aa12.99□□□□□ -0.33
ARHGEF1-213ENST00000595897 TRAV2A0A0B4J234 112 aa12.98□□□□□ -0.33
ARHGEF1-213ENST00000595897 A4D1N5 150 aa12.98□□□□□ -0.33
ARHGEF1-213ENST00000595897 ANKRD29Q8N6D5 301 aa12.98□□□□□ -0.33
ARHGEF1-213ENST00000595897 H3BUX3 64 aa12.97□□□□□ -0.33
ARHGEF1-213ENST00000595897 EDN2P20800 178 aa12.97□□□□□ -0.33
ARHGEF1-213ENST00000595897 BLCAPP62952 87 aa12.97□□□□□ -0.33
ARHGEF1-213ENST00000595897 TRAV26-1A0A087WT03 109 aa12.97□□□□□ -0.33
ARHGEF1-213ENST00000595897 VCX2Q9H322 139 aa12.97□□□□□ -0.33
ARHGEF1-213ENST00000595897 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.97□□□□□ -0.338e-7■■■□□ 16.2
ARHGEF1-213ENST00000595897 TRAV12-2A0A075B6T6 113 aa12.96□□□□□ -0.33
ARHGEF1-213ENST00000595897 ZNF688P0C7X2 276 aa12.96□□□□□ -0.33
ARHGEF1-213ENST00000595897 COL12A1Q99715 3063 aa12.96□□□□□ -0.33
ARHGEF1-213ENST00000595897 LGALS9O00182 355 aa12.96□□□□□ -0.33
ARHGEF1-213ENST00000595897 IGHG2P01859 326 aa12.96□□□□□ -0.33
ARHGEF1-213ENST00000595897 AMELXQ99217 191 aa12.96□□□□□ -0.33
ARHGEF1-213ENST00000595897 MDFICQ9P1T7 246 aa12.96□□□□□ -0.33
ARHGEF1-213ENST00000595897 C9JAW5 83 aa12.96□□□□□ -0.34
ARHGEF1-213ENST00000595897 H3BUA1 57 aa12.96□□□□□ -0.34
ARHGEF1-213ENST00000595897 Q1RN00 199 aa12.96□□□□□ -0.34
ARHGEF1-213ENST00000595897 SLC25A20O43772 301 aa12.95□□□□□ -0.34
ARHGEF1-213ENST00000595897 ERG28Q9UKR5 140 aa12.95□□□□□ -0.34
ARHGEF1-213ENST00000595897 MAP1AP78559 2803 aaPredicted RBP12.95□□□□□ -0.34
ARHGEF1-213ENST00000595897 TRBV6-5A0A0K0K1A5 114 aa12.94□□□□□ -0.34
ARHGEF1-213ENST00000595897 IGHV4-38-2P0DP08 117 aa12.94□□□□□ -0.34
ARHGEF1-213ENST00000595897 CREBBPQ92793 2442 aa12.94□□□□□ -0.34
ARHGEF1-213ENST00000595897 M0QY20 66 aa12.93□□□□□ -0.34
ARHGEF1-213ENST00000595897 LEPROTO15243 131 aa12.93□□□□□ -0.34
ARHGEF1-213ENST00000595897 TRPT1Q86TN4 253 aaKnown RBP12.93□□□□□ -0.34
ARHGEF1-213ENST00000595897 SBSPONQ8IVN8 264 aa12.93□□□□□ -0.34
ARHGEF1-213ENST00000595897 DCANP1Q8TF63 244 aa12.93□□□□□ -0.34
ARHGEF1-213ENST00000595897 IGHV3-16A0A0C4DH30 117 aa12.93□□□□□ -0.34
ARHGEF1-213ENST00000595897 TMEM223A0PJW6 202 aa12.93□□□□□ -0.34
ARHGEF1-213ENST00000595897 Q8N1Y9 231 aa12.93□□□□□ -0.34
ARHGEF1-213ENST00000595897 MUSTN1Q8IVN3 82 aa12.92□□□□□ -0.34
ARHGEF1-213ENST00000595897 IGHV3-33P01772 117 aa12.92□□□□□ -0.34
ARHGEF1-213ENST00000595897 RHOHQ15669 191 aa12.92□□□□□ -0.34
ARHGEF1-213ENST00000595897 A0A0J9YXV3 536 aa12.91□□□□□ -0.34
ARHGEF1-213ENST00000595897 TMEM262E9PQX1 116 aa12.91□□□□□ -0.34
ARHGEF1-213ENST00000595897 IGHV4-39P01824 125 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms