RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 C11orf21Q9P2W6 132 aa4.31□□□□□ -1.72
SDF2-206ENST00000587788 COL6A5A8TX70 2615 aa4.31□□□□□ -1.72
SDF2-206ENST00000587788 A0A096LNJ9 63 aa4.3□□□□□ -1.72
SDF2-206ENST00000587788 MUC21A0A0G2JKD1 596 aa4.3□□□□□ -1.72
SDF2-206ENST00000587788 MUC21A0A140T8X8 626 aa4.3□□□□□ -1.72
SDF2-206ENST00000587788 KLLNB2CW77 178 aa4.3□□□□□ -1.72
SDF2-206ENST00000587788 SIVA1O15304 175 aa4.3□□□□□ -1.72
SDF2-206ENST00000587788 DLEU1O43261 78 aa4.3□□□□□ -1.72
SDF2-206ENST00000587788 DUSP14O95147 198 aaKnown RBP4.3□□□□□ -1.72
SDF2-206ENST00000587788 LGALS1P09382 135 aaKnown RBP4.3□□□□□ -1.72
SDF2-206ENST00000587788 LAGE3Q14657 143 aa4.3□□□□□ -1.72
SDF2-206ENST00000587788 BATFQ16520 125 aa4.3□□□□□ -1.72
SDF2-206ENST00000587788 MAJINQ3KP22 176 aa4.3□□□□□ -1.72
SDF2-206ENST00000587788 MUC21Q5SSG8 566 aa4.3□□□□□ -1.72
SDF2-206ENST00000587788 OR9G4Q8NGQ1 327 aa4.3□□□□□ -1.72
SDF2-206ENST00000587788 LINC01006Q8NI28 216 aa4.3□□□□□ -1.72
SDF2-206ENST00000587788 IL17DQ8TAD2 202 aa4.3□□□□□ -1.72
SDF2-206ENST00000587788 MYOZ3Q8TDC0 251 aa4.3□□□□□ -1.72
SDF2-206ENST00000587788 ORAOV1Q8WV07 137 aa4.3□□□□□ -1.72
SDF2-206ENST00000587788 KRTAP4-12Q9BQ66 201 aa4.3□□□□□ -1.72
SDF2-206ENST00000587788 DPH3P1Q9H4G8 78 aa4.3□□□□□ -1.72
SDF2-206ENST00000587788 MSRB1Q9NZV6 116 aa4.3□□□□□ -1.72
SDF2-206ENST00000587788 PHLDA3Q9Y5J5 127 aa4.3□□□□□ -1.72
SDF2-206ENST00000587788 TENM1Q9UKZ4 2725 aa4.3□□□□□ -1.72
SDF2-206ENST00000587788 STAB1Q9NY15 2570 aa4.29□□□□□ -1.72
SDF2-206ENST00000587788 TRAV2A0A0B4J234 112 aa4.29□□□□□ -1.72
SDF2-206ENST00000587788 hDV102S1A0JD36 115 aa4.29□□□□□ -1.72
SDF2-206ENST00000587788 NXPH4O95158 308 aa4.29□□□□□ -1.72
SDF2-206ENST00000587788 NCR2O95944 276 aa4.29□□□□□ -1.72
SDF2-206ENST00000587788 ZNF25P17030 456 aaPredicted RBP4.29□□□□□ -1.72
SDF2-206ENST00000587788 EVI2AP22794 236 aa4.29□□□□□ -1.72
SDF2-206ENST00000587788 RNASE4P34096 147 aaKnown RBP4.29□□□□□ -1.72
SDF2-206ENST00000587788 KRTAP10-3P60369 221 aa4.29□□□□□ -1.72
SDF2-206ENST00000587788 RPL32P62910 135 aaKnown RBP4.29□□□□□ -1.72
SDF2-206ENST00000587788 ORMDL2Q53FV1 153 aa4.29□□□□□ -1.72
SDF2-206ENST00000587788 HIST2H2BDQ6DRA6 164 aa4.29□□□□□ -1.72
SDF2-206ENST00000587788 FAM159AQ6UWV7 190 aa4.29□□□□□ -1.72
SDF2-206ENST00000587788 POM121L12Q8N7R1 296 aa4.29□□□□□ -1.72
SDF2-206ENST00000587788 NRACQ8N912 160 aa4.29□□□□□ -1.72
SDF2-206ENST00000587788 AP1S3Q96PC3 154 aa4.29□□□□□ -1.72
SDF2-206ENST00000587788 TIMM8BQ9Y5J9 83 aaPredicted RBP4.29□□□□□ -1.72
SDF2-206ENST00000587788 TSSC4Q9Y5U2 329 aaPredicted RBP4.29□□□□□ -1.72
SDF2-206ENST00000587788 IGLV2-18A0A075B6J9 118 aa4.28□□□□□ -1.72
SDF2-206ENST00000587788 TRAV12-1A0A0B4J245 112 aa4.28□□□□□ -1.72
SDF2-206ENST00000587788 LINC01619G3V211 115 aa4.28□□□□□ -1.72
SDF2-206ENST00000587788 H0Y8G0 127 aa4.28□□□□□ -1.72
SDF2-206ENST00000587788 SMKR1H3BMG3 65 aa4.28□□□□□ -1.72
SDF2-206ENST00000587788 H3BVH4 76 aa4.28□□□□□ -1.72
SDF2-206ENST00000587788 K7EQG2 157 aa4.28□□□□□ -1.72
SDF2-206ENST00000587788 SMIM17P0DL12 118 aa4.28□□□□□ -1.72
SDF2-206ENST00000587788 PRB4P10163 310 aaPredicted RBP4.28□□□□□ -1.72
SDF2-206ENST00000587788 HLA-DRB4P13762 266 aa4.28□□□□□ -1.72
SDF2-206ENST00000587788 HINT1P49773 126 aaPredicted RBP4.28□□□□□ -1.72
SDF2-206ENST00000587788 SEC11AP67812 179 aa4.28□□□□□ -1.72
SDF2-206ENST00000587788 ANXA2RQ3ZCQ2 193 aa4.28□□□□□ -1.72
SDF2-206ENST00000587788 STPG4Q8N801 248 aa4.28□□□□□ -1.72
SDF2-206ENST00000587788 C3orf56Q8N813 242 aa4.28□□□□□ -1.72
SDF2-206ENST00000587788 DCANP1Q8TF63 244 aa4.28□□□□□ -1.72
SDF2-206ENST00000587788 C4orf3Q8WVX3 66 aa4.28□□□□□ -1.72
SDF2-206ENST00000587788 TMEM208Q9BTX3 173 aa4.28□□□□□ -1.72
SDF2-206ENST00000587788 SMIM2Q9BVW6 85 aa4.28□□□□□ -1.72
SDF2-206ENST00000587788 PEMTQ9UBM1 199 aa4.28□□□□□ -1.72
SDF2-206ENST00000587788 HLA-DRB4X5D2U9 266 aa4.28□□□□□ -1.72
SDF2-206ENST00000587788 ANK2Q01484 3957 aa4.28□□□□□ -1.72
SDF2-206ENST00000587788 IGHV4OR15-8A0A075B7B6 117 aa4.27□□□□□ -1.73
SDF2-206ENST00000587788 A0A087WW49 117 aa4.27□□□□□ -1.73
SDF2-206ENST00000587788 A0A0J9YX75 114 aa4.27□□□□□ -1.73
SDF2-206ENST00000587788 C7orf71A4D174 169 aa4.27□□□□□ -1.73
SDF2-206ENST00000587788 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.27□□□□□ -1.73
SDF2-206ENST00000587788 DPM2O94777 84 aa4.27□□□□□ -1.73
SDF2-206ENST00000587788 NUDT3O95989 172 aa4.27□□□□□ -1.73
SDF2-206ENST00000587788 PRSS1P07477 247 aa4.27□□□□□ -1.73
SDF2-206ENST00000587788 PLNP26678 52 aa4.27□□□□□ -1.73
SDF2-206ENST00000587788 PROK1P58294 105 aa4.27□□□□□ -1.73
SDF2-206ENST00000587788 SUMO2P61956 95 aaKnown RBP4.27□□□□□ -1.73
SDF2-206ENST00000587788 CD300EQ496F6 205 aaPredicted RBP4.27□□□□□ -1.73
SDF2-206ENST00000587788 PRR9Q5T870 116 aa4.27□□□□□ -1.73
SDF2-206ENST00000587788 FOXI2Q6ZQN5 318 aa4.27□□□□□ -1.73
SDF2-206ENST00000587788 BOD1L2Q8IYS8 172 aa4.27□□□□□ -1.73
SDF2-206ENST00000587788 OR11H1Q8NG94 326 aa4.27□□□□□ -1.73
SDF2-206ENST00000587788 COX11Q9Y6N1 276 aa4.27□□□□□ -1.73
SDF2-206ENST00000587788 TRGV11A0A075B6L2 103 aa4.26□□□□□ -1.73
SDF2-206ENST00000587788 A0A087WX48 190 aa4.26□□□□□ -1.73
SDF2-206ENST00000587788 A6NDN8 102 aa4.26□□□□□ -1.73
SDF2-206ENST00000587788 TRIAP1O43715 76 aa4.26□□□□□ -1.73
SDF2-206ENST00000587788 IGKCP01834 107 aa4.26□□□□□ -1.73
SDF2-206ENST00000587788 RNASE3P12724 160 aaKnown RBP4.26□□□□□ -1.73
SDF2-206ENST00000587788 HOXD3P31249 432 aaPredicted RBP4.26□□□□□ -1.73
SDF2-206ENST00000587788 CDKN1BP46527 198 aa4.26□□□□□ -1.73
SDF2-206ENST00000587788 CMC4P56277 68 aaPredicted RBP4.26□□□□□ -1.73
SDF2-206ENST00000587788 HSD52Q0P140 79 aa4.26□□□□□ -1.73
SDF2-206ENST00000587788 MPV17L2Q567V2 206 aa4.26□□□□□ -1.73
SDF2-206ENST00000587788 TMEM97Q5BJF2 176 aa4.26□□□□□ -1.73
SDF2-206ENST00000587788 TCTEX1D4Q5JR98 221 aa4.26□□□□□ -1.73
SDF2-206ENST00000587788 BVES-AS1Q5T3Y7 98 aa4.26□□□□□ -1.73
SDF2-206ENST00000587788 C10orf99Q6UWK7 81 aa4.26□□□□□ -1.73
SDF2-206ENST00000587788 NDUFA11Q86Y39 141 aa4.26□□□□□ -1.73
SDF2-206ENST00000587788 TOMM6Q96B49 74 aa4.26□□□□□ -1.73
SDF2-206ENST00000587788 HIGD1BQ9P298 99 aa4.26□□□□□ -1.73
SDF2-206ENST00000587788 IGKV3-7A0A075B6H7 116 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms