RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 ADIRFQ15847 76 aa8.73□□□□□ -1.01
RETREG3-203ENST00000585894 TMEM241Q24JQ0 296 aa8.73□□□□□ -1.01
RETREG3-203ENST00000585894 LYZL1Q6UWQ5 148 aa8.73□□□□□ -1.01
RETREG3-203ENST00000585894 SOHLH1Q5JUK2 328 aa8.72□□□□□ -1.01
RETREG3-203ENST00000585894 FAM231DQ6ZW35 169 aa8.72□□□□□ -1.01
RETREG3-203ENST00000585894 SLC7A5P1Q8MH63 180 aa8.72□□□□□ -1.01
RETREG3-203ENST00000585894 C14orf178Q8N769 122 aaPredicted RBP8.72□□□□□ -1.01
RETREG3-203ENST00000585894 GTSF1Q8WW33 167 aa8.72□□□□□ -1.01
RETREG3-203ENST00000585894 ISOC2Q96AB3 205 aa8.72□□□□□ -1.01
RETREG3-203ENST00000585894 SMDT1Q9H4I9 107 aa8.72□□□□□ -1.01
RETREG3-203ENST00000585894 XKRY2A2RUG3 117 aa8.71□□□□□ -1.01
RETREG3-203ENST00000585894 M0R2N4 97 aa8.71□□□□□ -1.01
RETREG3-203ENST00000585894 CCL18P55774 89 aa8.71□□□□□ -1.01
RETREG3-203ENST00000585894 MRPL23Q16540 153 aaKnown RBP8.71□□□□□ -1.01
RETREG3-203ENST00000585894 FAM74A3Q4VXF1 159 aa8.71□□□□□ -1.01
RETREG3-203ENST00000585894 ZFP2Q6ZN57 461 aa8.71□□□□□ -1.01
RETREG3-203ENST00000585894 NAT8Q9UHE5 227 aa8.71□□□□□ -1.01
RETREG3-203ENST00000585894 TRBV6-4A0A1B0GX49 114 aa8.71□□□□□ -1.02
RETREG3-203ENST00000585894 SRIP30626 198 aa8.71□□□□□ -1.02
RETREG3-203ENST00000585894 RNF212Q495C1 297 aa8.71□□□□□ -1.02
RETREG3-203ENST00000585894 RHODO00212 210 aa8.7□□□□□ -1.02
RETREG3-203ENST00000585894 CTRLP40313 264 aa8.7□□□□□ -1.02
RETREG3-203ENST00000585894 RHOHQ15669 191 aa8.7□□□□□ -1.02
RETREG3-203ENST00000585894 GAGE12JA6NER3 117 aa8.69□□□□□ -1.02
RETREG3-203ENST00000585894 CIDEAO60543 219 aa8.69□□□□□ -1.02
RETREG3-203ENST00000585894 NTF3P20783 257 aa8.69□□□□□ -1.02
RETREG3-203ENST00000585894 GAGE1Q13065 139 aa8.69□□□□□ -1.02
RETREG3-203ENST00000585894 GAGE4Q13068 117 aa8.69□□□□□ -1.02
RETREG3-203ENST00000585894 GAGE5Q13069 117 aa8.69□□□□□ -1.02
RETREG3-203ENST00000585894 ZNF56Q15929 161 aa8.69□□□□□ -1.02
RETREG3-203ENST00000585894 GAGE13Q4V321 117 aa8.69□□□□□ -1.02
RETREG3-203ENST00000585894 LYPD5Q6UWN5 251 aa8.69□□□□□ -1.02
RETREG3-203ENST00000585894 NEGR1Q7Z3B1 354 aa8.69□□□□□ -1.02
RETREG3-203ENST00000585894 ZNRF2Q8NHG8 242 aa8.69□□□□□ -1.02
RETREG3-203ENST00000585894 PGLYRP4Q96LB8 373 aa8.69□□□□□ -1.02
RETREG3-203ENST00000585894 PRADC1Q9BSG0 188 aa8.69□□□□□ -1.02
RETREG3-203ENST00000585894 OSTCQ9NRP0 149 aa8.69□□□□□ -1.02
RETREG3-203ENST00000585894 V9GYV3 84 aa8.69□□□□□ -1.02
RETREG3-203ENST00000585894 A0A1W2PPQ1 181 aa8.68□□□□□ -1.02
RETREG3-203ENST00000585894 F2Z2F3 143 aa8.68□□□□□ -1.02
RETREG3-203ENST00000585894 CACNG7P62955 275 aa8.68□□□□□ -1.02
RETREG3-203ENST00000585894 AP1S3Q96PC3 154 aa8.68□□□□□ -1.02
RETREG3-203ENST00000585894 KIF25-AS1Q9Y6Z4 181 aa8.68□□□□□ -1.02
RETREG3-203ENST00000585894 A8MWL6 223 aa8.68□□□□□ -1.02
RETREG3-203ENST00000585894 MGPP08493 103 aa8.68□□□□□ -1.02
RETREG3-203ENST00000585894 EVI2AP22794 236 aa8.68□□□□□ -1.02
RETREG3-203ENST00000585894 C15orf54Q8N8G6 183 aa8.68□□□□□ -1.02
RETREG3-203ENST00000585894 MRPS16Q9Y3D3 137 aaKnown RBP8.68□□□□□ -1.02
RETREG3-203ENST00000585894 F5H697 171 aa8.67□□□□□ -1.02
RETREG3-203ENST00000585894 LINC00315P59091 139 aa8.67□□□□□ -1.02
RETREG3-203ENST00000585894 TWIST1Q15672 202 aa8.67□□□□□ -1.02
RETREG3-203ENST00000585894 CT83Q5H943 113 aa8.67□□□□□ -1.02
RETREG3-203ENST00000585894 COMMD7Q86VX2 200 aa8.67□□□□□ -1.02
RETREG3-203ENST00000585894 OR10G8Q8NGN5 311 aa8.67□□□□□ -1.02
RETREG3-203ENST00000585894 TSKUQ8WUA8 353 aa8.67□□□□□ -1.02
RETREG3-203ENST00000585894 HIGD1CA8MV81 97 aa8.66□□□□□ -1.02
RETREG3-203ENST00000585894 SMIM17P0DL12 118 aa8.66□□□□□ -1.02
RETREG3-203ENST00000585894 ADCYAP1P18509 176 aa8.66□□□□□ -1.02
RETREG3-203ENST00000585894 FOXA3P55318 350 aaPredicted RBP8.66□□□□□ -1.02
RETREG3-203ENST00000585894 LINC00694P0DN24 101 aa8.66□□□□□ -1.02
RETREG3-203ENST00000585894 C4orf48Q5BLP8 95 aa8.66□□□□□ -1.02
RETREG3-203ENST00000585894 CNFNQ9BYD5 112 aa8.66□□□□□ -1.02
RETREG3-203ENST00000585894 Q9H8V8 135 aa8.66□□□□□ -1.02
RETREG3-203ENST00000585894 FAM3BP58499 235 aaPredicted RBP8.65□□□□□ -1.03
RETREG3-203ENST00000585894 RAB4BP61018 213 aa8.65□□□□□ -1.03
RETREG3-203ENST00000585894 WFDC10BQ8IUB3 73 aa8.65□□□□□ -1.03
RETREG3-203ENST00000585894 ATP6V0E2Q8NHE4 81 aa8.65□□□□□ -1.03
RETREG3-203ENST00000585894 UPK3BQ9BT76 320 aa8.65□□□□□ -1.03
RETREG3-203ENST00000585894 DNAH6Q9C0G6 4158 aa8.65□□□□□ -1.03
RETREG3-203ENST00000585894 SUMO4Q6EEV6 95 aa8.64□□□□□ -1.03
RETREG3-203ENST00000585894 KRTAP1-5Q9BYS1 174 aa8.64□□□□□ -1.03
RETREG3-203ENST00000585894 NBDYA0A0U1RRE5 68 aa8.63□□□□□ -1.03
RETREG3-203ENST00000585894 TRGC1P0CF51 173 aa8.63□□□□□ -1.03
RETREG3-203ENST00000585894 WDR73Q6P4I2 378 aa8.63□□□□□ -1.03
RETREG3-203ENST00000585894 Q6ZR54 194 aa8.63□□□□□ -1.03
RETREG3-203ENST00000585894 NEXN-AS1Q8NBZ9 246 aa8.63□□□□□ -1.03
RETREG3-203ENST00000585894 NUP35Q8NFH5 326 aa8.63□□□□□ -1.03
RETREG3-203ENST00000585894 GFRA4Q9GZZ7 299 aa8.63□□□□□ -1.03
RETREG3-203ENST00000585894 DPH3P1Q9H4G8 78 aa8.63□□□□□ -1.03
RETREG3-203ENST00000585894 TMEM218A2RU14 115 aa8.63□□□□□ -1.03
RETREG3-203ENST00000585894 UQCC3Q6UW78 93 aa8.63□□□□□ -1.03
RETREG3-203ENST00000585894 SH2D6Q7Z4S9 175 aa8.63□□□□□ -1.03
RETREG3-203ENST00000585894 TRAV26-2A0A0B4J265 109 aa8.62□□□□□ -1.03
RETREG3-203ENST00000585894 IGHV3-38A0A0C4DH36 116 aa8.62□□□□□ -1.03
RETREG3-203ENST00000585894 A0A1B0GUT8 65 aa8.62□□□□□ -1.03
RETREG3-203ENST00000585894 LINC00862A6NCI5 91 aa8.62□□□□□ -1.03
RETREG3-203ENST00000585894 F8W036 122 aa8.62□□□□□ -1.03
RETREG3-203ENST00000585894 SIVA1O15304 175 aa8.62□□□□□ -1.03
RETREG3-203ENST00000585894 GTSF1LQ9H1H1 148 aa8.62□□□□□ -1.03
RETREG3-203ENST00000585894 TRBV7-3A0A075B6L6 115 aa8.61□□□□□ -1.03
RETREG3-203ENST00000585894 TRBV10-1A0A0K0K1A3 114 aa8.61□□□□□ -1.03
RETREG3-203ENST00000585894 SMIM27A0A1W2PRY6 76 aa8.61□□□□□ -1.03
RETREG3-203ENST00000585894 M0QY20 66 aa8.61□□□□□ -1.03
RETREG3-203ENST00000585894 UBE2D3P61077 147 aa8.61□□□□□ -1.03
RETREG3-203ENST00000585894 UBE2D2P62837 147 aa8.61□□□□□ -1.03
RETREG3-203ENST00000585894 RPL36AP83881 106 aaKnown RBP8.61□□□□□ -1.03
RETREG3-203ENST00000585894 RPL36ALQ969Q0 106 aaKnown RBP8.61□□□□□ -1.03
RETREG3-203ENST00000585894 BORCS7Q96B45 105 aa8.61□□□□□ -1.03
RETREG3-203ENST00000585894 NAT8BQ9UHF3 227 aa8.61□□□□□ -1.03
RETREG3-203ENST00000585894 FAM231BA6NCW3 169 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 320.3 ms