RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 ZNRF2Q8NHG8 242 aa10.09□□□□□ -0.79
PCDHGB3-201ENST00000576222 RS1O15537 224 aa10.09□□□□□ -0.79
PCDHGB3-201ENST00000576222 HERVK_113P63121 156 aa10.09□□□□□ -0.79
PCDHGB3-201ENST00000576222 C16orf54Q6UWD8 224 aa10.09□□□□□ -0.79
PCDHGB3-201ENST00000576222 TRAV13-2A0A0B4J235 113 aa10.09□□□□□ -0.79
PCDHGB3-201ENST00000576222 Q9H8V8 135 aa10.09□□□□□ -0.79
PCDHGB3-201ENST00000576222 H3BT86 120 aa10.08□□□□□ -0.8
PCDHGB3-201ENST00000576222 HOXB4P17483 251 aaPredicted RBP10.08□□□□□ -0.8
PCDHGB3-201ENST00000576222 PFN2P35080 140 aa10.08□□□□□ -0.8
PCDHGB3-201ENST00000576222 Q8N9W7 124 aa10.08□□□□□ -0.8
PCDHGB3-201ENST00000576222 SPATA25Q9BR10 227 aa10.08□□□□□ -0.8
PCDHGB3-201ENST00000576222 C3orf56Q8N813 242 aa10.08□□□□□ -0.8
PCDHGB3-201ENST00000576222 RNF185Q96GF1 192 aa10.08□□□□□ -0.8
PCDHGB3-201ENST00000576222 C10orf142B7Z368 130 aa10.07□□□□□ -0.8
PCDHGB3-201ENST00000576222 NDUFV3P56181 108 aaKnown RBP10.07□□□□□ -0.8
PCDHGB3-201ENST00000576222 Q8N1Y9 231 aa10.07□□□□□ -0.8
PCDHGB3-201ENST00000576222 TMEM126AQ9H061 195 aa10.07□□□□□ -0.8
PCDHGB3-201ENST00000576222 CENPVL3A0A0U1RRI6 287 aa10.07□□□□□ -0.8
PCDHGB3-201ENST00000576222 B4DSR2 109 aa10.07□□□□□ -0.8
PCDHGB3-201ENST00000576222 C2CD3Q4AC94 2353 aa10.07□□□□□ -0.8
PCDHGB3-201ENST00000576222 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.07□□□□□ -0.8
PCDHGB3-201ENST00000576222 IGKV2-29A2NJV5 120 aaPredicted RBP10.07□□□□□ -0.8
PCDHGB3-201ENST00000576222 MED14OSP0DP75 135 aa10.07□□□□□ -0.8
PCDHGB3-201ENST00000576222 NEXN-AS1Q8NBZ9 246 aa10.07□□□□□ -0.8
PCDHGB3-201ENST00000576222 SPANXCQ9NY87 97 aa10.07□□□□□ -0.8
PCDHGB3-201ENST00000576222 CENPFP49454 3210 aa10.06□□□□□ -0.8
PCDHGB3-201ENST00000576222 XCL2Q9UBD3 114 aa10.06□□□□□ -0.8
PCDHGB3-201ENST00000576222 C11orf44Q8N8P7 122 aa10.06□□□□□ -0.8
PCDHGB3-201ENST00000576222 DEFB1P60022 68 aa10.06□□□□□ -0.8
PCDHGB3-201ENST00000576222 CPAMD8Q8IZJ3 1885 aa10.06□□□□□ -0.8
PCDHGB3-201ENST00000576222 INSL3P51460 131 aa10.05□□□□□ -0.8
PCDHGB3-201ENST00000576222 UBL5Q9BZL1 73 aa10.05□□□□□ -0.8
PCDHGB3-201ENST00000576222 CLEC2BQ92478 149 aa10.05□□□□□ -0.8
PCDHGB3-201ENST00000576222 CLUHP3Q96NS8 147 aa10.05□□□□□ -0.8
PCDHGB3-201ENST00000576222 WNK1Q9H4A3 2382 aa10.04□□□□□ -0.8
PCDHGB3-201ENST00000576222 TINCRA0A1B0GVN0 87 aa10.04□□□□□ -0.8
PCDHGB3-201ENST00000576222 CRYGBP07316 175 aa10.04□□□□□ -0.8
PCDHGB3-201ENST00000576222 SLC25A29Q8N8R3 303 aa10.04□□□□□ -0.8
PCDHGB3-201ENST00000576222 A0A0J9YY99 117 aa10.04□□□□□ -0.8
PCDHGB3-201ENST00000576222 H3BUA1 57 aa10.04□□□□□ -0.8
PCDHGB3-201ENST00000576222 A0A0B4J2C4 111 aa10.03□□□□□ -0.8
PCDHGB3-201ENST00000576222 DAND5Q8N907 189 aa10.03□□□□□ -0.8
PCDHGB3-201ENST00000576222 OPRPNQ99935 248 aaPredicted RBP10.03□□□□□ -0.8
PCDHGB3-201ENST00000576222 LGALS9O00182 355 aa10.03□□□□□ -0.8
PCDHGB3-201ENST00000576222 CFAP126Q5VTH2 177 aa10.03□□□□□ -0.8
PCDHGB3-201ENST00000576222 TMEM243Q9BU79 118 aa10.03□□□□□ -0.8
PCDHGB3-201ENST00000576222 HERV-K104P63124 156 aa10.03□□□□□ -0.8
PCDHGB3-201ENST00000576222 BDP1A6H8Y1 2624 aa10.03□□□□□ -0.8
PCDHGB3-201ENST00000576222 PF4P02776 101 aa10.02□□□□□ -0.8
PCDHGB3-201ENST00000576222 HTN3P15516 51 aa10.02□□□□□ -0.8
PCDHGB3-201ENST00000576222 PTPRQQ9UMZ3 2332 aa10.02□□□□□ -0.8
PCDHGB3-201ENST00000576222 TEX49A0A1B0GTD5 131 aa10.02□□□□□ -0.81
PCDHGB3-201ENST00000576222 ZFHX2Q9C0A1 2572 aaPredicted RBP10.02□□□□□ -0.81
PCDHGB3-201ENST00000576222 SS18Q15532 418 aa10.02□□□□□ -0.81
PCDHGB3-201ENST00000576222 IGHV3-30-3P0DP02 117 aa10.01□□□□□ -0.81
PCDHGB3-201ENST00000576222 C20orf203Q8NBC4 194 aa10.01□□□□□ -0.81
PCDHGB3-201ENST00000576222 ATOX1O00244 68 aa10.01□□□□□ -0.81
PCDHGB3-201ENST00000576222 GRNP28799 593 aaKnown RBP10.01□□□□□ -0.81
PCDHGB3-201ENST00000576222 XGP55808 180 aa10.01□□□□□ -0.81
PCDHGB3-201ENST00000576222 GAS8-AS1O95177 125 aa10.01□□□□□ -0.81
PCDHGB3-201ENST00000576222 MSMBP08118 114 aa10.01□□□□□ -0.81
PCDHGB3-201ENST00000576222 HAMPP81172 84 aa10.01□□□□□ -0.81
PCDHGB3-201ENST00000576222 LY6DQ14210 128 aa10.01□□□□□ -0.81
PCDHGB3-201ENST00000576222 HHLA3Q9XRX5 114 aa10.01□□□□□ -0.81
PCDHGB3-201ENST00000576222 CMC4P56277 68 aaPredicted RBP10□□□□□ -0.81
PCDHGB3-201ENST00000576222 AJUBAQ96IF1 538 aa10□□□□□ -0.81
PCDHGB3-201ENST00000576222 CSPG4Q6UVK1 2322 aa10□□□□□ -0.81
PCDHGB3-201ENST00000576222 TRBV7-3A0A075B6L6 115 aa9.99□□□□□ -0.81
PCDHGB3-201ENST00000576222 NXPH4O95158 308 aa9.99□□□□□ -0.81
PCDHGB3-201ENST00000576222 RPL35AP18077 110 aaKnown RBP9.99□□□□□ -0.81
PCDHGB3-201ENST00000576222 IGHV1-58A0A0C4DH39 117 aa9.99□□□□□ -0.81
PCDHGB3-201ENST00000576222 HOXD3P31249 432 aaPredicted RBP9.99□□□□□ -0.81
PCDHGB3-201ENST00000576222 A0A1B0GX51 115 aa9.99□□□□□ -0.81
PCDHGB3-201ENST00000576222 J3KT08 172 aa9.99□□□□□ -0.81
PCDHGB3-201ENST00000576222 C22orf34Q6ZV56 151 aa9.99□□□□□ -0.81
PCDHGB3-201ENST00000576222 Q71RC1 249 aaPredicted RBP9.99□□□□□ -0.81
PCDHGB3-201ENST00000576222 PTPRSQ13332 1948 aa9.99□□□□□ -0.81
PCDHGB3-201ENST00000576222 IGKV3D-7A0A0C4DH55 119 aa9.98□□□□□ -0.81
PCDHGB3-201ENST00000576222 A0A0J9YXY3 114 aa9.98□□□□□ -0.81
PCDHGB3-201ENST00000576222 DSCR9P59020 149 aa9.98□□□□□ -0.81
PCDHGB3-201ENST00000576222 CFHR3Q02985 330 aa9.98□□□□□ -0.81
PCDHGB3-201ENST00000576222 PIP4P1Q86T03 277 aa9.98□□□□□ -0.81
PCDHGB3-201ENST00000576222 SMAD5-AS1Q9Y6J3 95 aa9.98□□□□□ -0.81
PCDHGB3-201ENST00000576222 IGHV3-33P01772 117 aa9.98□□□□□ -0.81
PCDHGB3-201ENST00000576222 NRACQ8N912 160 aa9.98□□□□□ -0.81
PCDHGB3-201ENST00000576222 TNRC6BQ9UPQ9 1833 aaKnown RBP9.98□□□□□ -0.81
PCDHGB3-201ENST00000576222 LINC01619G3V211 115 aa9.97□□□□□ -0.81
PCDHGB3-201ENST00000576222 RBMY1FQ15415 496 aaKnown RBP9.97□□□□□ -0.81
PCDHGB3-201ENST00000576222 LINC00643Q86TS7 51 aa9.97□□□□□ -0.81
PCDHGB3-201ENST00000576222 C5orf56Q8N8D9 126 aa9.97□□□□□ -0.81
PCDHGB3-201ENST00000576222 K7ENP7 123 aa9.97□□□□□ -0.81
PCDHGB3-201ENST00000576222 UNQ9165/PRO28630Q6UXU0 137 aa9.97□□□□□ -0.81
PCDHGB3-201ENST00000576222 CCDC140Q96MF4 163 aa9.97□□□□□ -0.81
PCDHGB3-201ENST00000576222 A0A096LNJ9 63 aa9.97□□□□□ -0.81
PCDHGB3-201ENST00000576222 RPL32P62910 135 aaKnown RBP9.97□□□□□ -0.81
PCDHGB3-201ENST00000576222 LRP4O75096 1905 aa9.97□□□□□ -0.81
PCDHGB3-201ENST00000576222 SORL1Q92673 2214 aa9.97□□□□□ -0.81
PCDHGB3-201ENST00000576222 MDFICQ9P1T7 246 aa9.97□□□□□ -0.81
PCDHGB3-201ENST00000576222 U3KQE9 123 aa9.97□□□□□ -0.81
PCDHGB3-201ENST00000576222 IGF1P05019 195 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms