RNA–Protein interactions for RNA: ENST00000574699.1

TNFRSF12A-205, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 2

Gene TNFRSF12A, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-205ENST00000574699 MLST8Q9BVC4 326 aa13.05□□□□□ -0.32
TNFRSF12A-205ENST00000574699 GNG13Q9P2W3 67 aa13.05□□□□□ -0.32
TNFRSF12A-205ENST00000574699 A0A087WTM6 91 aa13.04□□□□□ -0.32
TNFRSF12A-205ENST00000574699 TRAV1-1A0A0B4J248 108 aa13.04□□□□□ -0.32
TNFRSF12A-205ENST00000574699 C14orf178Q8N769 122 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF12A-205ENST00000574699 A0A087WWL8 130 aa13.03□□□□□ -0.32
TNFRSF12A-205ENST00000574699 IBA57-AS1B1ANH7 110 aa13.03□□□□□ -0.32
TNFRSF12A-205ENST00000574699 PSCAO43653 123 aa13.03□□□□□ -0.32
TNFRSF12A-205ENST00000574699 IGHV3-30P01768 117 aa13.03□□□□□ -0.32
TNFRSF12A-205ENST00000574699 IGHV3-33P01772 117 aa13.03□□□□□ -0.32
TNFRSF12A-205ENST00000574699 CXCL1P09341 107 aa13.03□□□□□ -0.32
TNFRSF12A-205ENST00000574699 IGHV3-30-3P0DP02 117 aa13.03□□□□□ -0.32
TNFRSF12A-205ENST00000574699 IGHV3-30-5P0DP03 117 aa13.03□□□□□ -0.32
TNFRSF12A-205ENST00000574699 LRP1BQ9NZR2 4599 aa13.02□□□□□ -0.33
TNFRSF12A-205ENST00000574699 A0A087WWC5 75 aa13.02□□□□□ -0.33
TNFRSF12A-205ENST00000574699 RPL35P42766 123 aaKnown RBP13.02□□□□□ -0.33
TNFRSF12A-205ENST00000574699 CCL20P78556 96 aa13.02□□□□□ -0.33
TNFRSF12A-205ENST00000574699 PRR27Q6MZM9 219 aa13.02□□□□□ -0.33
TNFRSF12A-205ENST00000574699 C11orf52Q96A22 123 aa13.02□□□□□ -0.33
TNFRSF12A-205ENST00000574699 SULT1A2P50226 295 aa13.01□□□□□ -0.33
TNFRSF12A-205ENST00000574699 RPL19P84098 196 aaKnown RBP13.01□□□□□ -0.33
TNFRSF12A-205ENST00000574699 LAGE3Q14657 143 aa13.01□□□□□ -0.33
TNFRSF12A-205ENST00000574699 MAPKAPK5-AS1Q8N8E1 139 aa13.01□□□□□ -0.33
TNFRSF12A-205ENST00000574699 Q9HAA7 133 aa13.01□□□□□ -0.33
TNFRSF12A-205ENST00000574699 Q9UF83 564 aa13.01□□□□□ -0.33
TNFRSF12A-205ENST00000574699 C1QBP02746 253 aa13□□□□□ -0.33
TNFRSF12A-205ENST00000574699 TRBV10-1A0A0K0K1A3 114 aa12.99□□□□□ -0.33
TNFRSF12A-205ENST00000574699 IFNA1P01562 189 aa12.99□□□□□ -0.33
TNFRSF12A-205ENST00000574699 SLC51BQ86UW2 128 aa12.99□□□□□ -0.33
TNFRSF12A-205ENST00000574699 DERL1Q9BUN8 251 aa12.99□□□□□ -0.33
TNFRSF12A-205ENST00000574699 RPL36AP83881 106 aaKnown RBP12.98□□□□□ -0.33
TNFRSF12A-205ENST00000574699 OR10AG1Q8NH19 301 aa12.98□□□□□ -0.33
TNFRSF12A-205ENST00000574699 RPL36ALQ969Q0 106 aaKnown RBP12.98□□□□□ -0.33
TNFRSF12A-205ENST00000574699 SNAI2O43623 268 aa12.97□□□□□ -0.33
TNFRSF12A-205ENST00000574699 PDE6DO43924 150 aa12.97□□□□□ -0.33
TNFRSF12A-205ENST00000574699 OR5AL1P0C617 328 aa12.97□□□□□ -0.33
TNFRSF12A-205ENST00000574699 FUSP35637 526 aaKnown RBP eCLIP12.97□□□□□ -0.33
TNFRSF12A-205ENST00000574699 MEF2BQ02080 365 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF12A-205ENST00000574699 CENPWQ5EE01 88 aa12.97□□□□□ -0.33
TNFRSF12A-205ENST00000574699 SPANXN1Q5VSR9 72 aa12.97□□□□□ -0.33
TNFRSF12A-205ENST00000574699 Q6ZNX1 250 aa12.97□□□□□ -0.33
TNFRSF12A-205ENST00000574699 RAB4BP61018 213 aa12.96□□□□□ -0.33
TNFRSF12A-205ENST00000574699 ZNF56Q15929 161 aa12.96□□□□□ -0.33
TNFRSF12A-205ENST00000574699 TOR2AQ5JU69 321 aa12.96□□□□□ -0.33
TNFRSF12A-205ENST00000574699 SSBP4Q9BWG4 385 aaPredicted RBP12.96□□□□□ -0.33
TNFRSF12A-205ENST00000574699 URGCP-MRPS24S4R325 110 aa12.96□□□□□ -0.33
TNFRSF12A-205ENST00000574699 HSPG2P98160 4391 aa12.96□□□□□ -0.34
TNFRSF12A-205ENST00000574699 DNAH5Q8TE73 4624 aa12.95□□□□□ -0.34
TNFRSF12A-205ENST00000574699 TRBV7-3A0A075B6L6 115 aa12.95□□□□□ -0.34
TNFRSF12A-205ENST00000574699 GNG4P50150 75 aa12.95□□□□□ -0.34
TNFRSF12A-205ENST00000574699 AKAP14Q86UN6 197 aa12.95□□□□□ -0.34
TNFRSF12A-205ENST00000574699 DAZAP1Q96EP5 407 aaKnown RBP12.95□□□□□ -0.34
TNFRSF12A-205ENST00000574699 SMIM12Q96EX1 92 aa12.95□□□□□ -0.34
TNFRSF12A-205ENST00000574699 TM2D2Q9BX73 214 aa12.95□□□□□ -0.34
TNFRSF12A-205ENST00000574699 TRAV8-3A0A0A6YYJ7 113 aa12.94□□□□□ -0.34
TNFRSF12A-205ENST00000574699 Q8N1X5 172 aa12.94□□□□□ -0.34
TNFRSF12A-205ENST00000574699 Q8N3U1 123 aa12.94□□□□□ -0.34
TNFRSF12A-205ENST00000574699 KRTAP4-5Q9BYR2 181 aa12.94□□□□□ -0.34
TNFRSF12A-205ENST00000574699 ABCA13Q86UQ4 5058 aa12.93□□□□□ -0.34
TNFRSF12A-205ENST00000574699 MUC21A0A0G2JKD1 596 aa12.93□□□□□ -0.34
TNFRSF12A-205ENST00000574699 MUC21A0A140T8X8 626 aa12.93□□□□□ -0.34
TNFRSF12A-205ENST00000574699 LRCOL1A6NCL2 159 aa12.93□□□□□ -0.34
TNFRSF12A-205ENST00000574699 BCL2P10415 239 aa12.93□□□□□ -0.34
TNFRSF12A-205ENST00000574699 UBE2D3P61077 147 aa12.93□□□□□ -0.34
TNFRSF12A-205ENST00000574699 UBE2D2P62837 147 aa12.93□□□□□ -0.34
TNFRSF12A-205ENST00000574699 DAZ4Q86SG3 579 aaKnown RBP12.93□□□□□ -0.34
TNFRSF12A-205ENST00000574699 DAZ3Q9NR90 486 aaKnown RBP12.93□□□□□ -0.34
TNFRSF12A-205ENST00000574699 SMIM17P0DL12 118 aa12.92□□□□□ -0.34
TNFRSF12A-205ENST00000574699 TAGLN2P37802 199 aaKnown RBP12.92□□□□□ -0.34
TNFRSF12A-205ENST00000574699 RPS20P60866 119 aaKnown RBP12.92□□□□□ -0.34
TNFRSF12A-205ENST00000574699 OR10G8Q8NGN5 311 aa12.92□□□□□ -0.34
TNFRSF12A-205ENST00000574699 NTN5Q8WTR8 489 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF12A-205ENST00000574699 AP1S3Q96PC3 154 aa12.92□□□□□ -0.34
TNFRSF12A-205ENST00000574699 BIN3Q9NQY0 253 aa12.92□□□□□ -0.34
TNFRSF12A-205ENST00000574699 MED9Q9NWA0 146 aa12.92□□□□□ -0.34
TNFRSF12A-205ENST00000574699 VAX2Q9UIW0 290 aa12.92□□□□□ -0.34
TNFRSF12A-205ENST00000574699 APOBP04114 4563 aaKnown RBP12.91□□□□□ -0.34
TNFRSF12A-205ENST00000574699 RAB19A4D1S5 217 aa12.91□□□□□ -0.34
TNFRSF12A-205ENST00000574699 F5H697 171 aa12.91□□□□□ -0.34
TNFRSF12A-205ENST00000574699 IGLV2-8P01709 118 aa12.91□□□□□ -0.34
TNFRSF12A-205ENST00000574699 GCSHP23434 173 aa12.91□□□□□ -0.34
TNFRSF12A-205ENST00000574699 SSTP61278 116 aa12.91□□□□□ -0.34
TNFRSF12A-205ENST00000574699 KCNIP4Q6PIL6 250 aa12.91□□□□□ -0.34
TNFRSF12A-205ENST00000574699 NIT1Q86X76 327 aa12.91□□□□□ -0.34
TNFRSF12A-205ENST00000574699 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.91□□□□□ -0.34
TNFRSF12A-205ENST00000574699 OR2D3Q8NGH3 330 aa12.91□□□□□ -0.34
TNFRSF12A-205ENST00000574699 TPPP3Q9BW30 176 aa12.91□□□□□ -0.34
TNFRSF12A-205ENST00000574699 hCG_2014768A0A024R1R8 64 aa12.9□□□□□ -0.34
TNFRSF12A-205ENST00000574699 A0A087WX48 190 aa12.9□□□□□ -0.34
TNFRSF12A-205ENST00000574699 IGLV5-52A0A0A0MRZ9 124 aa12.9□□□□□ -0.34
TNFRSF12A-205ENST00000574699 XKRY2A2RUG3 117 aa12.9□□□□□ -0.34
TNFRSF12A-205ENST00000574699 C19orf71A6NCJ1 209 aa12.9□□□□□ -0.34
TNFRSF12A-205ENST00000574699 Q8N814 137 aa12.9□□□□□ -0.34
TNFRSF12A-205ENST00000574699 FER1L6-AS1Q8NA97 138 aa12.9□□□□□ -0.34
TNFRSF12A-205ENST00000574699 CHCHD7Q9BUK0 85 aa12.9□□□□□ -0.34
TNFRSF12A-205ENST00000574699 P01737 135 aa12.89□□□□□ -0.35
TNFRSF12A-205ENST00000574699 KRTAP10-1P60331 282 aa12.89□□□□□ -0.35
TNFRSF12A-205ENST00000574699 C9orf62Q8N4C0 152 aa12.89□□□□□ -0.35
TNFRSF12A-205ENST00000574699 NEXN-AS1Q8NBZ9 246 aa12.89□□□□□ -0.35
TNFRSF12A-205ENST00000574699 RMI2Q96E14 147 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms