RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 GAGE13Q4V321 117 aa8.59□□□□□ -1.03
NPLOC4-213ENST00000573519 FAM74A4Q5TZK3 123 aa8.59□□□□□ -1.03
NPLOC4-213ENST00000573519 PRR27Q6MZM9 219 aa8.59□□□□□ -1.03
NPLOC4-213ENST00000573519 ZFP2Q6ZN57 461 aa8.59□□□□□ -1.03
NPLOC4-213ENST00000573519 MLST8Q9BVC4 326 aa8.59□□□□□ -1.03
NPLOC4-213ENST00000573519 SAMD10Q9BYL1 202 aa8.59□□□□□ -1.03
NPLOC4-213ENST00000573519 GTSF1LQ9H1H1 148 aa8.59□□□□□ -1.03
NPLOC4-213ENST00000573519 BOLA1Q9Y3E2 137 aa8.59□□□□□ -1.03
NPLOC4-213ENST00000573519 PHLDA3Q9Y5J5 127 aa8.59□□□□□ -1.03
NPLOC4-213ENST00000573519 RYR1P21817 5038 aa8.58□□□□□ -1.04
NPLOC4-213ENST00000573519 RAB19A4D1S5 217 aa8.58□□□□□ -1.04
NPLOC4-213ENST00000573519 M0R381 172 aa8.58□□□□□ -1.04
NPLOC4-213ENST00000573519 PSCAO43653 123 aa8.58□□□□□ -1.04
NPLOC4-213ENST00000573519 PIK3CD-AS1Q5SR53 167 aa8.58□□□□□ -1.04
NPLOC4-213ENST00000573519 DNLZQ5SXM8 178 aa8.58□□□□□ -1.04
NPLOC4-213ENST00000573519 LELP1Q5T871 98 aa8.58□□□□□ -1.04
NPLOC4-213ENST00000573519 ALKAL2Q6UX46 152 aa8.58□□□□□ -1.04
NPLOC4-213ENST00000573519 C11orf52Q96A22 123 aa8.58□□□□□ -1.04
NPLOC4-213ENST00000573519 A0A087WTM6 91 aa8.57□□□□□ -1.04
NPLOC4-213ENST00000573519 IFNA1P01562 189 aa8.57□□□□□ -1.04
NPLOC4-213ENST00000573519 BCL2P10415 239 aa8.57□□□□□ -1.04
NPLOC4-213ENST00000573519 CENPWQ5EE01 88 aa8.57□□□□□ -1.04
NPLOC4-213ENST00000573519 LINC01556Q5JQF7 62 aa8.57□□□□□ -1.04
NPLOC4-213ENST00000573519 C14orf178Q8N769 122 aaPredicted RBP8.57□□□□□ -1.04
NPLOC4-213ENST00000573519 Q9HAA7 133 aa8.57□□□□□ -1.04
NPLOC4-213ENST00000573519 SCRT2Q9NQ03 307 aa8.57□□□□□ -1.04
NPLOC4-213ENST00000573519 PGPEP1Q9NXJ5 209 aa8.57□□□□□ -1.04
NPLOC4-213ENST00000573519 A0A087WWL8 130 aa8.56□□□□□ -1.04
NPLOC4-213ENST00000573519 MUC21A0A0G2JKD1 596 aa8.56□□□□□ -1.04
NPLOC4-213ENST00000573519 MUC21A0A140T8X8 626 aa8.56□□□□□ -1.04
NPLOC4-213ENST00000573519 RHODO00212 210 aa8.56□□□□□ -1.04
NPLOC4-213ENST00000573519 MEF2BQ02080 365 aaPredicted RBP8.56□□□□□ -1.04
NPLOC4-213ENST00000573519 UFSP1Q6NVU6 142 aa8.56□□□□□ -1.04
NPLOC4-213ENST00000573519 KRTAP4-5Q9BYR2 181 aa8.56□□□□□ -1.04
NPLOC4-213ENST00000573519 MED9Q9NWA0 146 aa8.56□□□□□ -1.04
NPLOC4-213ENST00000573519 Q9UF83 564 aa8.56□□□□□ -1.04
NPLOC4-213ENST00000573519 LRP1BQ9NZR2 4599 aa8.55□□□□□ -1.04
NPLOC4-213ENST00000573519 PDE6DO43924 150 aa8.55□□□□□ -1.04
NPLOC4-213ENST00000573519 IGLV2-8P01709 118 aa8.55□□□□□ -1.04
NPLOC4-213ENST00000573519 SSTP61278 116 aa8.55□□□□□ -1.04
NPLOC4-213ENST00000573519 ZFP82Q8N141 532 aa8.55□□□□□ -1.04
NPLOC4-213ENST00000573519 SFRP2Q96HF1 295 aa8.55□□□□□ -1.04
NPLOC4-213ENST00000573519 VAX2Q9UIW0 290 aa8.55□□□□□ -1.04
NPLOC4-213ENST00000573519 IBA57-AS1B1ANH7 110 aa8.54□□□□□ -1.04
NPLOC4-213ENST00000573519 GNG4P50150 75 aa8.54□□□□□ -1.04
NPLOC4-213ENST00000573519 CDPF1Q6NVV7 123 aa8.54□□□□□ -1.04
NPLOC4-213ENST00000573519 OR10AG1Q8NH19 301 aa8.54□□□□□ -1.04
NPLOC4-213ENST00000573519 TRBV20OR9-2A0A075B6H5 130 aa8.53□□□□□ -1.04
NPLOC4-213ENST00000573519 LINC00694P0DN24 101 aa8.53□□□□□ -1.04
NPLOC4-213ENST00000573519 GZMBP10144 247 aa8.53□□□□□ -1.04
NPLOC4-213ENST00000573519 BLOC1S1P78537 153 aa8.53□□□□□ -1.04
NPLOC4-213ENST00000573519 HSPG2P98160 4391 aa8.52□□□□□ -1.04
NPLOC4-213ENST00000573519 CXCL1P09341 107 aa8.52□□□□□ -1.05
NPLOC4-213ENST00000573519 Q8N3U1 123 aa8.52□□□□□ -1.05
NPLOC4-213ENST00000573519 DAZAP1Q96EP5 407 aaKnown RBP8.52□□□□□ -1.05
NPLOC4-213ENST00000573519 ABCA13Q86UQ4 5058 aa8.51□□□□□ -1.05
NPLOC4-213ENST00000573519 DNAH5Q8TE73 4624 aa8.51□□□□□ -1.05
NPLOC4-213ENST00000573519 A0A087WWC5 75 aa8.51□□□□□ -1.05
NPLOC4-213ENST00000573519 C19orf71A6NCJ1 209 aa8.51□□□□□ -1.05
NPLOC4-213ENST00000573519 RBFOX3A6NFN3 312 aa8.51□□□□□ -1.05
NPLOC4-213ENST00000573519 SNAI2O43623 268 aa8.51□□□□□ -1.05
NPLOC4-213ENST00000573519 ZNF56Q15929 161 aa8.51□□□□□ -1.05
NPLOC4-213ENST00000573519 Q8N1X5 172 aa8.51□□□□□ -1.05
NPLOC4-213ENST00000573519 OR2D3Q8NGH3 330 aa8.51□□□□□ -1.05
NPLOC4-213ENST00000573519 TPPP3Q9BW30 176 aa8.51□□□□□ -1.05
NPLOC4-213ENST00000573519 SSBP4Q9BWG4 385 aaPredicted RBP8.51□□□□□ -1.05
NPLOC4-213ENST00000573519 URGCP-MRPS24S4R325 110 aa8.51□□□□□ -1.05
NPLOC4-213ENST00000573519 OR5AL1P0C617 328 aa8.5□□□□□ -1.05
NPLOC4-213ENST00000573519 TAGLN2P37802 199 aaKnown RBP8.5□□□□□ -1.05
NPLOC4-213ENST00000573519 RPL36AP83881 106 aaKnown RBP8.5□□□□□ -1.05
NPLOC4-213ENST00000573519 LAGE3Q14657 143 aa8.5□□□□□ -1.05
NPLOC4-213ENST00000573519 SPANXN1Q5VSR9 72 aa8.5□□□□□ -1.05
NPLOC4-213ENST00000573519 DAZ4Q86SG3 579 aaKnown RBP8.5□□□□□ -1.05
NPLOC4-213ENST00000573519 RPL36ALQ969Q0 106 aaKnown RBP8.5□□□□□ -1.05
NPLOC4-213ENST00000573519 DAZ3Q9NR90 486 aaKnown RBP8.5□□□□□ -1.05
NPLOC4-213ENST00000573519 IGLV5-52A0A0A0MRZ9 124 aa8.49□□□□□ -1.05
NPLOC4-213ENST00000573519 LRCOL1A6NCL2 159 aa8.49□□□□□ -1.05
NPLOC4-213ENST00000573519 P01737 135 aa8.49□□□□□ -1.05
NPLOC4-213ENST00000573519 GCSHP23434 173 aa8.49□□□□□ -1.05
NPLOC4-213ENST00000573519 KRTAP10-1P60331 282 aa8.49□□□□□ -1.05
NPLOC4-213ENST00000573519 LYPD6BQ8NI32 183 aa8.49□□□□□ -1.05
NPLOC4-213ENST00000573519 TM2D2Q9BX73 214 aa8.49□□□□□ -1.05
NPLOC4-213ENST00000573519 APOBP04114 4563 aaKnown RBP8.49□□□□□ -1.05
NPLOC4-213ENST00000573519 TRBV7-3A0A075B6L6 115 aa8.48□□□□□ -1.05
NPLOC4-213ENST00000573519 TRAV8-3A0A0A6YYJ7 113 aa8.48□□□□□ -1.05
NPLOC4-213ENST00000573519 TRBV10-1A0A0K0K1A3 114 aa8.48□□□□□ -1.05
NPLOC4-213ENST00000573519 F5H697 171 aa8.48□□□□□ -1.05
NPLOC4-213ENST00000573519 K7EN84 100 aa8.48□□□□□ -1.05
NPLOC4-213ENST00000573519 CEBPGP53567 150 aa8.48□□□□□ -1.05
NPLOC4-213ENST00000573519 RPS20P60866 119 aaKnown RBP8.48□□□□□ -1.05
NPLOC4-213ENST00000573519 RAB4BP61018 213 aa8.48□□□□□ -1.05
NPLOC4-213ENST00000573519 TOR2AQ5JU69 321 aa8.48□□□□□ -1.05
NPLOC4-213ENST00000573519 KCNIP4Q6PIL6 250 aa8.48□□□□□ -1.05
NPLOC4-213ENST00000573519 Q8N814 137 aa8.48□□□□□ -1.05
NPLOC4-213ENST00000573519 FER1L6-AS1Q8NA97 138 aa8.48□□□□□ -1.05
NPLOC4-213ENST00000573519 OCC1Q8TAD7 63 aa8.48□□□□□ -1.05
NPLOC4-213ENST00000573519 SMIM12Q96EX1 92 aa8.48□□□□□ -1.05
NPLOC4-213ENST00000573519 IGLC6P0CF74 106 aa8.47□□□□□ -1.05
NPLOC4-213ENST00000573519 SMIM17P0DL12 118 aa8.47□□□□□ -1.05
NPLOC4-213ENST00000573519 UBE2D3P61077 147 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms