RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 MAST4O15021 2626 aa5.19□□□□□ -1.58
SMG1-215ENST00000568239 TRGV11A0A075B6L2 103 aa5.19□□□□□ -1.58
SMG1-215ENST00000568239 HSBP1L1C9JCN9 74 aa5.19□□□□□ -1.58
SMG1-215ENST00000568239 H0Y8G0 127 aa5.19□□□□□ -1.58
SMG1-215ENST00000568239 LEPROTL1O95214 131 aa5.19□□□□□ -1.58
SMG1-215ENST00000568239 S100A12P80511 92 aa5.19□□□□□ -1.58
SMG1-215ENST00000568239 ZNF876PQ49A33 203 aa5.19□□□□□ -1.58
SMG1-215ENST00000568239 TRRAPQ9Y4A5 3859 aa5.19□□□□□ -1.58
SMG1-215ENST00000568239 STAB1Q9NY15 2570 aa5.18□□□□□ -1.58
SMG1-215ENST00000568239 SYT8Q8NBV8 401 aa5.18□□□□□ -1.58
SMG1-215ENST00000568239 OR2K2Q8NGT1 345 aa5.18□□□□□ -1.58
SMG1-215ENST00000568239 CITED1Q99966 193 aa5.18□□□□□ -1.58
SMG1-215ENST00000568239 C3orf79P0CE67 100 aa5.18□□□□□ -1.58
SMG1-215ENST00000568239 CMC4P56277 68 aaPredicted RBP5.18□□□□□ -1.58
SMG1-215ENST00000568239 DNLZQ5SXM8 178 aa5.18□□□□□ -1.58
SMG1-215ENST00000568239 GSN-AS1Q9NRJ2 163 aa5.18□□□□□ -1.58
SMG1-215ENST00000568239 A8MTW9 85 aa5.17□□□□□ -1.58
SMG1-215ENST00000568239 TRPT1Q86TN4 253 aaKnown RBP5.17□□□□□ -1.58
SMG1-215ENST00000568239 DEFB125Q8N687 156 aa5.17□□□□□ -1.58
SMG1-215ENST00000568239 C9orf85Q96MD7 179 aa5.17□□□□□ -1.58
SMG1-215ENST00000568239 ZNF56Q15929 161 aa5.17□□□□□ -1.58
SMG1-215ENST00000568239 BEAN1Q3B7T3 259 aa5.17□□□□□ -1.58
SMG1-215ENST00000568239 LINC00173Q6ZV60 143 aa5.17□□□□□ -1.58
SMG1-215ENST00000568239 GTSCR1Q86UQ5 136 aa5.17□□□□□ -1.58
SMG1-215ENST00000568239 RPL39LQ96EH5 51 aaKnown RBP5.17□□□□□ -1.58
SMG1-215ENST00000568239 PRO1933Q9H354 126 aa5.17□□□□□ -1.58
SMG1-215ENST00000568239 IGHV3-73A0A0B4J1V6 119 aa5.16□□□□□ -1.58
SMG1-215ENST00000568239 DEFB104AQ8WTQ1 72 aa5.16□□□□□ -1.58
SMG1-215ENST00000568239 MRAP2Q96G30 205 aa5.16□□□□□ -1.58
SMG1-215ENST00000568239 LAMTOR2Q9Y2Q5 125 aa5.16□□□□□ -1.58
SMG1-215ENST00000568239 ZNF415Q09FC8 603 aa5.16□□□□□ -1.58
SMG1-215ENST00000568239 KRTAP24-1Q3LI83 254 aa5.16□□□□□ -1.58
SMG1-215ENST00000568239 C9orf66Q5T8R8 295 aa5.16□□□□□ -1.58
SMG1-215ENST00000568239 ATOH7Q8N100 152 aa5.16□□□□□ -1.58
SMG1-215ENST00000568239 J3QL48 77 aa5.16□□□□□ -1.58
SMG1-215ENST00000568239 EREGO14944 169 aa5.16□□□□□ -1.58
SMG1-215ENST00000568239 TCAPO15273 167 aa5.16□□□□□ -1.58
SMG1-215ENST00000568239 NRACQ8N912 160 aa5.16□□□□□ -1.58
SMG1-215ENST00000568239 MCRIP2Q9BUT9 160 aaKnown RBP5.16□□□□□ -1.58
SMG1-215ENST00000568239 NXT2Q9NPJ8 142 aaKnown RBP5.16□□□□□ -1.58
SMG1-215ENST00000568239 C19orf73Q9NVV2 129 aa5.16□□□□□ -1.58
SMG1-215ENST00000568239 COL6A5A8TX70 2615 aa5.15□□□□□ -1.58
SMG1-215ENST00000568239 NXPH4O95158 308 aa5.15□□□□□ -1.58
SMG1-215ENST00000568239 AZU1P20160 251 aa5.15□□□□□ -1.58
SMG1-215ENST00000568239 INSL3P51460 131 aa5.15□□□□□ -1.58
SMG1-215ENST00000568239 C1orf158Q8N1D5 194 aa5.15□□□□□ -1.58
SMG1-215ENST00000568239 C3orf56Q8N813 242 aa5.15□□□□□ -1.58
SMG1-215ENST00000568239 RASL10AQ92737 203 aa5.15□□□□□ -1.58
SMG1-215ENST00000568239 C18orf15Q96N68 181 aa5.15□□□□□ -1.58
SMG1-215ENST00000568239 TMEM70Q9BUB7 260 aa5.15□□□□□ -1.58
SMG1-215ENST00000568239 HSPB8Q9UJY1 196 aa5.15□□□□□ -1.58
SMG1-215ENST00000568239 HBDP02042 147 aa5.15□□□□□ -1.59
SMG1-215ENST00000568239 IGLL1P15814 213 aa5.15□□□□□ -1.59
SMG1-215ENST00000568239 SUMO2P61956 95 aaKnown RBP5.15□□□□□ -1.59
SMG1-215ENST00000568239 SUMO4Q6EEV6 95 aa5.15□□□□□ -1.59
SMG1-215ENST00000568239 C20orf144Q9BQM9 153 aa5.15□□□□□ -1.59
SMG1-215ENST00000568239 MAP1LC3CQ9BXW4 147 aa5.15□□□□□ -1.59
SMG1-215ENST00000568239 MRPL16Q9NX20 251 aaKnown RBP5.15□□□□□ -1.59
SMG1-215ENST00000568239 PAM16Q9Y3D7 125 aa5.15□□□□□ -1.59
SMG1-215ENST00000568239 M0R2P5 195 aa5.14□□□□□ -1.59
SMG1-215ENST00000568239 NEGR1Q7Z3B1 354 aa5.14□□□□□ -1.59
SMG1-215ENST00000568239 ZNF664Q8N3J9 261 aa5.14□□□□□ -1.59
SMG1-215ENST00000568239 Q8N8P6 123 aa5.14□□□□□ -1.59
SMG1-215ENST00000568239 PMCHL2Q9BQD1 86 aa5.14□□□□□ -1.59
SMG1-215ENST00000568239 KIF25-AS1Q9Y6Z4 181 aa5.14□□□□□ -1.59
SMG1-215ENST00000568239 FBN1P35555 2871 aaKnown RBP5.14□□□□□ -1.59
SMG1-215ENST00000568239 NBEAL2Q6ZNJ1 2754 aa5.14□□□□□ -1.59
SMG1-215ENST00000568239 CRYGDP07320 174 aa5.14□□□□□ -1.59
SMG1-215ENST00000568239 LINC00315P59091 139 aa5.14□□□□□ -1.59
SMG1-215ENST00000568239 FAM110AQ9BQ89 295 aa5.14□□□□□ -1.59
SMG1-215ENST00000568239 GOLT1BQ9Y3E0 138 aa5.14□□□□□ -1.59
SMG1-215ENST00000568239 A0A096LNJ9 63 aa5.13□□□□□ -1.59
SMG1-215ENST00000568239 TSTD3H0UI37 97 aa5.13□□□□□ -1.59
SMG1-215ENST00000568239 SYS1-DBNDD2H3BUS1 97 aa5.13□□□□□ -1.59
SMG1-215ENST00000568239 TMEM158Q8WZ71 300 aa5.13□□□□□ -1.59
SMG1-215ENST00000568239 VAMP8Q9BV40 100 aa5.13□□□□□ -1.59
SMG1-215ENST00000568239 SMIM2Q9BVW6 85 aa5.13□□□□□ -1.59
SMG1-215ENST00000568239 C1QTNF4Q9BXJ3 329 aa5.13□□□□□ -1.59
SMG1-215ENST00000568239 CSTL1Q9H114 145 aa5.13□□□□□ -1.59
SMG1-215ENST00000568239 TRGV1A0A0A0MS02 117 aa5.13□□□□□ -1.59
SMG1-215ENST00000568239 NUDT3O95989 172 aa5.13□□□□□ -1.59
SMG1-215ENST00000568239 GIG44P09565 113 aaPredicted RBP5.13□□□□□ -1.59
SMG1-215ENST00000568239 LAGE3Q14657 143 aa5.13□□□□□ -1.59
SMG1-215ENST00000568239 C11orf72Q8NBR9 251 aa5.13□□□□□ -1.59
SMG1-215ENST00000568239 ZNF747Q9BV97 191 aa5.13□□□□□ -1.59
SMG1-215ENST00000568239 ST20Q9HBF5 79 aa5.13□□□□□ -1.59
SMG1-215ENST00000568239 PPP1R17O96001 155 aa5.13□□□□□ -1.59
SMG1-215ENST00000568239 EMP1P54849 157 aa5.13□□□□□ -1.59
SMG1-215ENST00000568239 SPATA12Q7Z6I5 190 aa5.13□□□□□ -1.59
SMG1-215ENST00000568239 Q8N976 141 aa5.13□□□□□ -1.59
SMG1-215ENST00000568239 IGLV2-18A0A075B6J9 118 aa5.12□□□□□ -1.59
SMG1-215ENST00000568239 C20orf202A1L168 122 aa5.12□□□□□ -1.59
SMG1-215ENST00000568239 FCER1GP30273 86 aa5.12□□□□□ -1.59
SMG1-215ENST00000568239 PKIAP61925 76 aa5.12□□□□□ -1.59
SMG1-215ENST00000568239 C12orf54Q6X4T0 127 aa5.12□□□□□ -1.59
SMG1-215ENST00000568239 ZNF705AQ6ZN79 300 aaPredicted RBP5.12□□□□□ -1.59
SMG1-215ENST00000568239 PRIMA1Q86XR5 153 aa5.12□□□□□ -1.59
SMG1-215ENST00000568239 C20orf78Q9BR46 151 aa5.12□□□□□ -1.59
SMG1-215ENST00000568239 SDHAF1A6NFY7 115 aa5.12□□□□□ -1.59
SMG1-215ENST00000568239 A8MWV9 139 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 306 ms