RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 Q6ZRN7 208 aaPredicted RBP17.13■□□□□ 0.33
FANCA-228ENST00000567943 PCLOQ9Y6V0 5065 aa17.13■□□□□ 0.33
FANCA-228ENST00000567943 TRBV20OR9-2A0A075B6H5 130 aa17.12■□□□□ 0.33
FANCA-228ENST00000567943 TIRAPP58753 221 aa17.12■□□□□ 0.33
FANCA-228ENST00000567943 OR10AG1Q8NH19 301 aa17.12■□□□□ 0.33
FANCA-228ENST00000567943 DAZAP1Q96EP5 407 aaKnown RBP17.12■□□□□ 0.33
FANCA-228ENST00000567943 SMIM12Q96EX1 92 aa17.12■□□□□ 0.33
FANCA-228ENST00000567943 LY96Q9Y6Y9 160 aa17.12■□□□□ 0.33
FANCA-228ENST00000567943 CRYGDP07320 174 aa17.11■□□□□ 0.33
FANCA-228ENST00000567943 BTF3P20290 206 aaKnown RBP17.11■□□□□ 0.33
FANCA-228ENST00000567943 C14orf178Q8N769 122 aaPredicted RBP17.11■□□□□ 0.33
FANCA-228ENST00000567943 APOBP04114 4563 aaKnown RBP17.11■□□□□ 0.33
FANCA-228ENST00000567943 GAGE12JA6NER3 117 aa17.1■□□□□ 0.33
FANCA-228ENST00000567943 SNAI2O43623 268 aa17.1■□□□□ 0.33
FANCA-228ENST00000567943 GAGE1Q13065 139 aa17.1■□□□□ 0.33
FANCA-228ENST00000567943 GAGE4Q13068 117 aa17.1■□□□□ 0.33
FANCA-228ENST00000567943 GAGE5Q13069 117 aa17.1■□□□□ 0.33
FANCA-228ENST00000567943 GAGE13Q4V321 117 aa17.1■□□□□ 0.33
FANCA-228ENST00000567943 ATP6V0E2Q8NHE4 81 aa17.1■□□□□ 0.33
FANCA-228ENST00000567943 LYPD6BQ8NI32 183 aa17.1■□□□□ 0.33
FANCA-228ENST00000567943 SSBP4Q9BWG4 385 aaPredicted RBP17.1■□□□□ 0.33
FANCA-228ENST00000567943 MUC21A0A0G2JKD1 596 aa17.09■□□□□ 0.33
FANCA-228ENST00000567943 MUC21A0A140T8X8 626 aa17.09■□□□□ 0.33
FANCA-228ENST00000567943 C19orf71A6NCJ1 209 aa17.09■□□□□ 0.33
FANCA-228ENST00000567943 RBFOX3A6NFN3 312 aa17.09■□□□□ 0.33
FANCA-228ENST00000567943 OR5AL1P0C617 328 aa17.09■□□□□ 0.33
FANCA-228ENST00000567943 Q9UF83 564 aa17.09■□□□□ 0.33
FANCA-228ENST00000567943 TNFRSF18Q9Y5U5 241 aa17.09■□□□□ 0.33
FANCA-228ENST00000567943 OR2D3Q8NGH3 330 aa17.08■□□□□ 0.32
FANCA-228ENST00000567943 TRAV9-2A0A087WT02 112 aa17.07■□□□□ 0.32
FANCA-228ENST00000567943 DNAH10OSP0CZ25 163 aa17.07■□□□□ 0.32
FANCA-228ENST00000567943 GZMBP10144 247 aa17.07■□□□□ 0.32
FANCA-228ENST00000567943 SSTP61278 116 aa17.07■□□□□ 0.32
FANCA-228ENST00000567943 SPANXN1Q5VSR9 72 aa17.07■□□□□ 0.32
FANCA-228ENST00000567943 GTSF1LQ9H1H1 148 aa17.07■□□□□ 0.32
FANCA-228ENST00000567943 LINC00694P0DN24 101 aa17.06■□□□□ 0.32
FANCA-228ENST00000567943 EVI2AP22794 236 aa17.06■□□□□ 0.32
FANCA-228ENST00000567943 OR10J3Q5JRS4 329 aa17.06■□□□□ 0.32
FANCA-228ENST00000567943 KRTAP17-1Q9BYP8 105 aa17.06■□□□□ 0.32
FANCA-228ENST00000567943 BIN3Q9NQY0 253 aa17.06■□□□□ 0.32
FANCA-228ENST00000567943 TRAV8-6A0A0B4J262 113 aa17.05■□□□□ 0.32
FANCA-228ENST00000567943 P01737 135 aa17.05■□□□□ 0.32
FANCA-228ENST00000567943 RPS20P60866 119 aaKnown RBP17.05■□□□□ 0.32
FANCA-228ENST00000567943 C16orf90A8MZG2 172 aa17.04■□□□□ 0.32
FANCA-228ENST00000567943 LELP1Q5T871 98 aa17.04■□□□□ 0.32
FANCA-228ENST00000567943 TPPP3Q9BW30 176 aa17.04■□□□□ 0.32
FANCA-228ENST00000567943 IGHV3-38A0A0C4DH36 116 aa17.03■□□□□ 0.32
FANCA-228ENST00000567943 TMEM250H0YL14 139 aa17.03■□□□□ 0.32
FANCA-228ENST00000567943 KRTAP10-2P60368 255 aa17.03■□□□□ 0.32
FANCA-228ENST00000567943 TOR2AQ5JU69 321 aa17.03■□□□□ 0.32
FANCA-228ENST00000567943 SPATA12Q7Z6I5 190 aa17.03■□□□□ 0.32
FANCA-228ENST00000567943 FER1L6-AS1Q8NA97 138 aa17.03■□□□□ 0.32
FANCA-228ENST00000567943 K7EP13 123 aa17.02■□□□□ 0.32
FANCA-228ENST00000567943 IGLC6P0CF74 106 aa17.02■□□□□ 0.32
FANCA-228ENST00000567943 OCC1Q8TAD7 63 aa17.02■□□□□ 0.32
FANCA-228ENST00000567943 XKRY2A2RUG3 117 aa17.01■□□□□ 0.31
FANCA-228ENST00000567943 CEBPGP53567 150 aa17.01■□□□□ 0.31
FANCA-228ENST00000567943 ZNF56Q15929 161 aa17.01■□□□□ 0.31
FANCA-228ENST00000567943 NUDT10Q8NFP7 164 aa17.01■□□□□ 0.31
FANCA-228ENST00000567943 NUDT11Q96G61 164 aa17.01■□□□□ 0.31
FANCA-228ENST00000567943 EIF5A2Q9GZV4 153 aaKnown RBP17.01■□□□□ 0.31
FANCA-228ENST00000567943 K7EN84 100 aa17■□□□□ 0.31
FANCA-228ENST00000567943 RAB4BP61018 213 aa17■□□□□ 0.31
FANCA-228ENST00000567943 TRBV10-1A0A0K0K1A3 114 aa16.99■□□□□ 0.31
FANCA-228ENST00000567943 LINC01556Q5JQF7 62 aa16.99■□□□□ 0.31
FANCA-228ENST00000567943 C10orf126Q8N4M7 172 aa16.99■□□□□ 0.31
FANCA-228ENST00000567943 MSRB1Q9NZV6 116 aa16.99■□□□□ 0.31
FANCA-228ENST00000567943 NFE4Q86UQ8 179 aa16.98■□□□□ 0.31
FANCA-228ENST00000567943 FAM210AQ96ND0 272 aa16.98■□□□□ 0.31
FANCA-228ENST00000567943 AP1S3Q96PC3 154 aa16.98■□□□□ 0.31
FANCA-228ENST00000567943 RNASE7Q9H1E1 156 aaKnown RBP16.98■□□□□ 0.31
FANCA-228ENST00000567943 F5H697 171 aa16.97■□□□□ 0.31
FANCA-228ENST00000567943 SMIM17P0DL12 118 aa16.97■□□□□ 0.31
FANCA-228ENST00000567943 RPL36AP83881 106 aaKnown RBP16.97■□□□□ 0.31
FANCA-228ENST00000567943 RPL36ALQ969Q0 106 aaKnown RBP16.97■□□□□ 0.31
FANCA-228ENST00000567943 ABCA13Q86UQ4 5058 aa16.96■□□□□ 0.31
FANCA-228ENST00000567943 IGHV3-30P01768 117 aa16.96■□□□□ 0.31
FANCA-228ENST00000567943 IGHV3-33P01772 117 aa16.96■□□□□ 0.31
FANCA-228ENST00000567943 IGHV3-30-3P0DP02 117 aa16.96■□□□□ 0.31
FANCA-228ENST00000567943 IGHV3-30-5P0DP03 117 aa16.96■□□□□ 0.31
FANCA-228ENST00000567943 CACNG7P62955 275 aa16.96■□□□□ 0.31
FANCA-228ENST00000567943 RPP21Q9H633 154 aaKnown RBP16.96■□□□□ 0.31
FANCA-228ENST00000567943 KIF25-AS1Q9Y6Z4 181 aa16.96■□□□□ 0.31
FANCA-228ENST00000567943 A0A087WWC5 75 aa16.95■□□□□ 0.3
FANCA-228ENST00000567943 F2Z2F3 143 aa16.95■□□□□ 0.3
FANCA-228ENST00000567943 LYZL1Q6UWQ5 148 aa16.95■□□□□ 0.3
FANCA-228ENST00000567943 TRBV7-3A0A075B6L6 115 aa16.94■□□□□ 0.3
FANCA-228ENST00000567943 UBE2D3P61077 147 aa16.93■□□□□ 0.3
FANCA-228ENST00000567943 UBE2D2P62837 147 aa16.93■□□□□ 0.3
FANCA-228ENST00000567943 TEX261Q6UWH6 196 aa16.93■□□□□ 0.3
FANCA-228ENST00000567943 NEXN-AS1Q8NBZ9 246 aa16.93■□□□□ 0.3
FANCA-228ENST00000567943 OR10G8Q8NGN5 311 aa16.93■□□□□ 0.3
FANCA-228ENST00000567943 NDUFS6O75380 124 aaKnown RBP16.92■□□□□ 0.3
FANCA-228ENST00000567943 SRP19P09132 144 aaKnown RBP16.92■□□□□ 0.3
FANCA-228ENST00000567943 FUSP35637 526 aaKnown RBP eCLIP16.92■□□□□ 0.3
FANCA-228ENST00000567943 Q8N3U1 123 aa16.92■□□□□ 0.3
FANCA-228ENST00000567943 SMIM7Q9BQ49 75 aa16.92■□□□□ 0.3
FANCA-228ENST00000567943 IBA57-AS1B1ANH7 110 aa16.91■□□□□ 0.3
FANCA-228ENST00000567943 CDK2AP2O75956 126 aa16.91■□□□□ 0.3
FANCA-228ENST00000567943 MGPP08493 103 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms