RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 LINC01559Q495D7 138 aa8.43□□□□□ -1.06
SMAD3-208ENST00000558827 UFSP1Q6NVU6 142 aa8.43□□□□□ -1.06
SMAD3-208ENST00000558827 NFE4Q86UQ8 179 aa8.43□□□□□ -1.06
SMAD3-208ENST00000558827 DERL1Q9BUN8 251 aa8.43□□□□□ -1.06
SMAD3-208ENST00000558827 GTSF1LQ9H1H1 148 aa8.43□□□□□ -1.06
SMAD3-208ENST00000558827 CIDEAO60543 219 aa8.42□□□□□ -1.06
SMAD3-208ENST00000558827 TIRAPP58753 221 aa8.42□□□□□ -1.06
SMAD3-208ENST00000558827 LELP1Q5T871 98 aa8.42□□□□□ -1.06
SMAD3-208ENST00000558827 COX8CQ7Z4L0 72 aa8.42□□□□□ -1.06
SMAD3-208ENST00000558827 MAPKAPK5-AS1Q8N8E1 139 aa8.42□□□□□ -1.06
SMAD3-208ENST00000558827 RAB19A4D1S5 217 aa8.41□□□□□ -1.06
SMAD3-208ENST00000558827 PSCAO43653 123 aa8.41□□□□□ -1.06
SMAD3-208ENST00000558827 RPL35P42766 123 aaKnown RBP8.41□□□□□ -1.06
SMAD3-208ENST00000558827 LINC01556Q5JQF7 62 aa8.41□□□□□ -1.06
SMAD3-208ENST00000558827 DNLZQ5SXM8 178 aa8.41□□□□□ -1.06
SMAD3-208ENST00000558827 ZFP2Q6ZN57 461 aa8.41□□□□□ -1.06
SMAD3-208ENST00000558827 OR10AG1Q8NH19 301 aa8.41□□□□□ -1.06
SMAD3-208ENST00000558827 SFRP2Q96HF1 295 aa8.41□□□□□ -1.06
SMAD3-208ENST00000558827 TCEAL7Q9BRU2 100 aa8.41□□□□□ -1.06
SMAD3-208ENST00000558827 SCRT2Q9NQ03 307 aa8.41□□□□□ -1.06
SMAD3-208ENST00000558827 S100A9P06702 114 aaKnown RBP8.4□□□□□ -1.06
SMAD3-208ENST00000558827 GZMBP10144 247 aa8.4□□□□□ -1.06
SMAD3-208ENST00000558827 ZFP82Q8N141 532 aa8.4□□□□□ -1.06
SMAD3-208ENST00000558827 C10orf126Q8N4M7 172 aa8.4□□□□□ -1.06
SMAD3-208ENST00000558827 MLST8Q9BVC4 326 aa8.4□□□□□ -1.06
SMAD3-208ENST00000558827 RBFOX3A6NFN3 312 aa8.39□□□□□ -1.07
SMAD3-208ENST00000558827 IBA57-AS1B1ANH7 110 aa8.39□□□□□ -1.07
SMAD3-208ENST00000558827 CDK2AP2O75956 126 aa8.39□□□□□ -1.07
SMAD3-208ENST00000558827 LINC00694P0DN24 101 aa8.39□□□□□ -1.07
SMAD3-208ENST00000558827 KRTAP10-1P60331 282 aa8.39□□□□□ -1.07
SMAD3-208ENST00000558827 CENPWQ5EE01 88 aa8.39□□□□□ -1.07
SMAD3-208ENST00000558827 DAZ4Q86SG3 579 aaKnown RBP8.39□□□□□ -1.07
SMAD3-208ENST00000558827 DNAJC30Q96LL9 226 aa8.39□□□□□ -1.07
SMAD3-208ENST00000558827 TPPP3Q9BW30 176 aa8.39□□□□□ -1.07
SMAD3-208ENST00000558827 DAZ3Q9NR90 486 aaKnown RBP8.39□□□□□ -1.07
SMAD3-208ENST00000558827 PGPEP1Q9NXJ5 209 aa8.39□□□□□ -1.07
SMAD3-208ENST00000558827 RHODO00212 210 aa8.38□□□□□ -1.07
SMAD3-208ENST00000558827 SULT1A2P50226 295 aa8.38□□□□□ -1.07
SMAD3-208ENST00000558827 HAMPP81172 84 aa8.38□□□□□ -1.07
SMAD3-208ENST00000558827 PIK3CD-AS1Q5SR53 167 aa8.38□□□□□ -1.07
SMAD3-208ENST00000558827 MANBALQ9NQG1 85 aa8.38□□□□□ -1.07
SMAD3-208ENST00000558827 F5H697 171 aa8.37□□□□□ -1.07
SMAD3-208ENST00000558827 LECT2O14960 151 aa8.37□□□□□ -1.07
SMAD3-208ENST00000558827 ZNF56Q15929 161 aa8.37□□□□□ -1.07
SMAD3-208ENST00000558827 SPANXN1Q5VSR9 72 aa8.37□□□□□ -1.07
SMAD3-208ENST00000558827 EIF5AL1Q6IS14 154 aaKnown RBP8.37□□□□□ -1.07
SMAD3-208ENST00000558827 MED9Q9NWA0 146 aa8.37□□□□□ -1.07
SMAD3-208ENST00000558827 TRAV1-1A0A0B4J248 108 aa8.36□□□□□ -1.07
SMAD3-208ENST00000558827 LRCOL1A6NCL2 159 aa8.36□□□□□ -1.07
SMAD3-208ENST00000558827 IGLV2-8P01709 118 aa8.36□□□□□ -1.07
SMAD3-208ENST00000558827 RAB5CP51148 216 aa8.36□□□□□ -1.07
SMAD3-208ENST00000558827 WFDC2Q14508 124 aa8.36□□□□□ -1.07
SMAD3-208ENST00000558827 SLC51BQ86UW2 128 aa8.36□□□□□ -1.07
SMAD3-208ENST00000558827 C11orf52Q96A22 123 aa8.36□□□□□ -1.07
SMAD3-208ENST00000558827 TEX46H3BTG2 121 aa8.35□□□□□ -1.07
SMAD3-208ENST00000558827 K7EP13 123 aa8.35□□□□□ -1.07
SMAD3-208ENST00000558827 OR2D3Q8NGH3 330 aa8.35□□□□□ -1.07
SMAD3-208ENST00000558827 DAZAP1Q96EP5 407 aaKnown RBP8.35□□□□□ -1.07
SMAD3-208ENST00000558827 TMEM262E9PQX1 116 aa8.34□□□□□ -1.07
SMAD3-208ENST00000558827 SNAI2O43623 268 aa8.34□□□□□ -1.07
SMAD3-208ENST00000558827 GNG4P50150 75 aa8.34□□□□□ -1.07
SMAD3-208ENST00000558827 UBE2D3P61077 147 aa8.34□□□□□ -1.07
SMAD3-208ENST00000558827 UBE2D2P62837 147 aa8.34□□□□□ -1.07
SMAD3-208ENST00000558827 RPL36AP83881 106 aaKnown RBP8.34□□□□□ -1.07
SMAD3-208ENST00000558827 MEF2BQ02080 365 aaPredicted RBP8.34□□□□□ -1.07
SMAD3-208ENST00000558827 C9orf62Q8N4C0 152 aa8.34□□□□□ -1.07
SMAD3-208ENST00000558827 NEXN-AS1Q8NBZ9 246 aa8.34□□□□□ -1.07
SMAD3-208ENST00000558827 RPL36ALQ969Q0 106 aaKnown RBP8.34□□□□□ -1.07
SMAD3-208ENST00000558827 KLK12Q9UKR0 248 aa8.34□□□□□ -1.07
SMAD3-208ENST00000558827 TRBV7-3A0A075B6L6 115 aa8.33□□□□□ -1.08
SMAD3-208ENST00000558827 A0A087WWC5 75 aa8.33□□□□□ -1.08
SMAD3-208ENST00000558827 IGLV5-52A0A0A0MRZ9 124 aa8.33□□□□□ -1.08
SMAD3-208ENST00000558827 IFNA1P01562 189 aa8.33□□□□□ -1.08
SMAD3-208ENST00000558827 MGPP08493 103 aa8.33□□□□□ -1.08
SMAD3-208ENST00000558827 BCL2P10415 239 aa8.33□□□□□ -1.08
SMAD3-208ENST00000558827 GCSHP23434 173 aa8.33□□□□□ -1.08
SMAD3-208ENST00000558827 NKX2-5P52952 324 aaPredicted RBP8.33□□□□□ -1.08
SMAD3-208ENST00000558827 XGP55808 180 aa8.33□□□□□ -1.08
SMAD3-208ENST00000558827 RAB4BP61018 213 aa8.33□□□□□ -1.08
SMAD3-208ENST00000558827 ALKAL2Q6UX46 152 aa8.33□□□□□ -1.08
SMAD3-208ENST00000558827 NIT1Q86X76 327 aa8.33□□□□□ -1.08
SMAD3-208ENST00000558827 Q8N1X5 172 aa8.33□□□□□ -1.08
SMAD3-208ENST00000558827 DEFB104AQ8WTQ1 72 aa8.33□□□□□ -1.08
SMAD3-208ENST00000558827 BAALCQ8WXS3 180 aa8.33□□□□□ -1.08
SMAD3-208ENST00000558827 SSBP4Q9BWG4 385 aaPredicted RBP8.33□□□□□ -1.08
SMAD3-208ENST00000558827 URGCP-MRPS24S4R325 110 aa8.33□□□□□ -1.08
SMAD3-208ENST00000558827 TRBV20OR9-2A0A075B6H5 130 aa8.32□□□□□ -1.08
SMAD3-208ENST00000558827 SMR3BP02814 79 aaPredicted RBP8.32□□□□□ -1.08
SMAD3-208ENST00000558827 CXCL1P09341 107 aa8.32□□□□□ -1.08
SMAD3-208ENST00000558827 OR5AL1P0C617 328 aa8.32□□□□□ -1.08
SMAD3-208ENST00000558827 FER1L6-AS1Q8NA97 138 aa8.32□□□□□ -1.08
SMAD3-208ENST00000558827 UBE2WQ96B02 151 aa8.32□□□□□ -1.08
SMAD3-208ENST00000558827 VAX2Q9UIW0 290 aa8.32□□□□□ -1.08
SMAD3-208ENST00000558827 BOLA1Q9Y3E2 137 aa8.32□□□□□ -1.08
SMAD3-208ENST00000558827 FAT1Q14517 4588 aa8.32□□□□□ -1.08
SMAD3-208ENST00000558827 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.31□□□□□ -1.08
SMAD3-208ENST00000558827 IGKV2D-24A0A075B6R9 120 aa8.31□□□□□ -1.08
SMAD3-208ENST00000558827 A0A087WX48 190 aa8.31□□□□□ -1.08
SMAD3-208ENST00000558827 TRBV10-1A0A0K0K1A3 114 aa8.31□□□□□ -1.08
SMAD3-208ENST00000558827 C19orf71A6NCJ1 209 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms