RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 CRYGDP07320 174 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 METTL15P1P0C7V9 234 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 CDKN1BP46527 198 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 KRTAP10-4P60372 401 aaPredicted RBP1.47□□□□□ -2.17
SCFD1-219ENST00000556413 PPP1R1AQ13522 171 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 IL18Q14116 193 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 SMCO1Q147U7 214 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 PSG3Q16557 428 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 KCTD21Q4G0X4 260 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 MIC13Q5XKP0 118 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 LYPD5Q6UWN5 251 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 NTM-AS1Q6ZSK4 140 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 TMEM229BQ8NBD8 167 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 C11orf72Q8NBR9 251 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 OR10J6PQ8NGY7 276 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 TERB2Q8NHR7 220 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 ZFAND1Q8TCF1 268 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 ZNF431Q8TF32 576 aaPredicted RBP1.47□□□□□ -2.17
SCFD1-219ENST00000556413 BAALCQ8WXS3 180 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 BORCS5Q969J3 196 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 TRGV9Q99603 122 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 MGST2Q99735 147 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 UPK3BQ9BT76 320 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 MTFP1Q9UDX5 166 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 FLVCR2Q9UPI3 526 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 RCL1Q9Y2P8 373 aaKnown RBP1.47□□□□□ -2.17
SCFD1-219ENST00000556413 ICOSQ9Y6W8 199 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 LY96Q9Y6Y9 160 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 TMEM56-RWDD3S4R434 201 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 SRRM2Q9UQ35 2752 aaKnown RBP1.47□□□□□ -2.17
SCFD1-219ENST00000556413 TRGV4A0A0C4DH28 118 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 UBE2L5PA0A1B0GUS4 154 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 C7orf66A4D0T2 115 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 C7orf71A4D174 169 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 FAM24AA6NFZ4 105 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 FAM25EA8MYX2 175 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 C9JCJ5 164 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 H7BYZ3 331 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 COX7A2P2O60397 106 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 HYPMO75409 117 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 ATG12O94817 140 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 APOA1P02647 267 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 OR10J4P0C629 311 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 OR4E1P0C645 316 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 AKAIN1P0CW23 69 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 TSPOP30536 169 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 SRIP30626 198 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 NUP62P37198 522 aaPredicted RBP1.46□□□□□ -2.18
SCFD1-219ENST00000556413 CRYBA4P53673 196 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 RAB11AP62491 216 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 GNG5P63218 68 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 OR10J3Q5JRS4 329 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 C1orf194Q5T5A4 169 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 CLPSL2Q6UWE3 100 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 ZNF493Q6ZR52 646 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 MIR17HGQ75NE6 70 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 NEGR1Q7Z3B1 354 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 LINC00305Q7Z4B0 112 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 DAZ4Q86SG3 579 aaKnown RBP1.46□□□□□ -2.18
SCFD1-219ENST00000556413 Q8N814 137 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 TMEM75Q8N9X5 138 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 OR10P1Q8NGE3 313 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 OR10G4Q8NGN3 311 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 OR52E5Q8NH55 327 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 MCFD2Q8NI22 146 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 DEFB104AQ8WTQ1 72 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 SMIM4Q8WVI0 70 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 SLC25A31Q9H0C2 315 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 ARV1Q9H2C2 271 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 VCX3BQ9H321 246 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 PSENENQ9NZ42 101 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 CCDC59Q9P031 241 aaKnown RBP1.46□□□□□ -2.18
SCFD1-219ENST00000556413 GSKIPQ9P0R6 139 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 LSM5Q9Y4Y9 91 aaKnown RBP1.46□□□□□ -2.18
SCFD1-219ENST00000556413 U3KQ87 197 aa1.46□□□□□ -2.18
SCFD1-219ENST00000556413 TRAV8-1A0A0A6YYK1 113 aa1.45□□□□□ -2.18
SCFD1-219ENST00000556413 A0A0B4J2A0 478 aa1.45□□□□□ -2.18
SCFD1-219ENST00000556413 PCP4L1A6NKN8 68 aa1.45□□□□□ -2.18
SCFD1-219ENST00000556413 GNRH2O43555 120 aa1.45□□□□□ -2.18
SCFD1-219ENST00000556413 SYNGR2O43760 224 aa1.45□□□□□ -2.18
SCFD1-219ENST00000556413 SPINK4O60575 86 aa1.45□□□□□ -2.18
SCFD1-219ENST00000556413 PITX3O75364 302 aa1.45□□□□□ -2.18
SCFD1-219ENST00000556413 CST7O76096 145 aa1.45□□□□□ -2.18
SCFD1-219ENST00000556413 SFT2D2O95562 160 aa1.45□□□□□ -2.18
SCFD1-219ENST00000556413 FABP1P07148 127 aa1.45□□□□□ -2.18
SCFD1-219ENST00000556413 MT1HL1P0DM35 61 aa1.45□□□□□ -2.18
SCFD1-219ENST00000556413 IGLC2P0DOY2 106 aa1.45□□□□□ -2.18
SCFD1-219ENST00000556413 RPL7P18124 248 aaKnown RBP1.45□□□□□ -2.18
SCFD1-219ENST00000556413 EVI2AP22794 236 aa1.45□□□□□ -2.18
SCFD1-219ENST00000556413 GPX4P36969 197 aaPredicted RBP1.45□□□□□ -2.18
SCFD1-219ENST00000556413 RANBP1P43487 201 aa1.45□□□□□ -2.18
SCFD1-219ENST00000556413 BCAP31P51572 246 aa1.45□□□□□ -2.18
SCFD1-219ENST00000556413 TCL1AP56279 114 aa1.45□□□□□ -2.18
SCFD1-219ENST00000556413 S100A10P60903 97 aa1.45□□□□□ -2.18
SCFD1-219ENST00000556413 RPL37AP61513 92 aaKnown RBP1.45□□□□□ -2.18
SCFD1-219ENST00000556413 BAXQ07812 192 aa1.45□□□□□ -2.18
SCFD1-219ENST00000556413 COX19Q49B96 90 aa1.45□□□□□ -2.18
SCFD1-219ENST00000556413 PYDC2Q56P42 97 aa1.45□□□□□ -2.18
SCFD1-219ENST00000556413 DNLZQ5SXM8 178 aa1.45□□□□□ -2.18
SCFD1-219ENST00000556413 C10orf113Q5VZT2 155 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms