RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 DIRC1Q969H9 104 aa0.49□□□□□ -2.33
SUPT16H-206ENST00000556309 CHCHD1Q96BP2 118 aaKnown RBP0.49□□□□□ -2.33
SUPT16H-206ENST00000556309 S100A16Q96FQ6 103 aaKnown RBP0.49□□□□□ -2.33
SUPT16H-206ENST00000556309 CARD19Q96LW7 228 aa0.49□□□□□ -2.33
SUPT16H-206ENST00000556309 OBSCN-AS1Q96MR7 158 aa0.49□□□□□ -2.33
SUPT16H-206ENST00000556309 TRGV9Q99603 122 aa0.49□□□□□ -2.33
SUPT16H-206ENST00000556309 SLC50A1Q9BRV3 221 aa0.49□□□□□ -2.33
SUPT16H-206ENST00000556309 SNHG12Q9BXW3 62 aa0.49□□□□□ -2.33
SUPT16H-206ENST00000556309 CYP4F30PQ9H0H9 118 aa0.49□□□□□ -2.33
SUPT16H-206ENST00000556309 AGPAT4-IT1Q9H0P7 198 aa0.49□□□□□ -2.33
SUPT16H-206ENST00000556309 CST11Q9H112 138 aa0.49□□□□□ -2.33
SUPT16H-206ENST00000556309 BCL2L10Q9HD36 194 aa0.49□□□□□ -2.33
SUPT16H-206ENST00000556309 OTORQ9NRC9 128 aa0.49□□□□□ -2.33
SUPT16H-206ENST00000556309 MRPL35Q9NZE8 188 aaKnown RBP0.49□□□□□ -2.33
SUPT16H-206ENST00000556309 CACFD1Q9UGQ2 172 aa0.49□□□□□ -2.33
SUPT16H-206ENST00000556309 LSM2Q9Y333 95 aaKnown RBP0.49□□□□□ -2.33
SUPT16H-206ENST00000556309 LAMA4Q16363 1823 aa0.49□□□□□ -2.33
SUPT16H-206ENST00000556309 PEAK1Q9H792 1746 aa0.49□□□□□ -2.33
SUPT16H-206ENST00000556309 CUL7Q14999 1698 aa0.49□□□□□ -2.33
SUPT16H-206ENST00000556309 ZC3H13Q5T200 1668 aaKnown RBP0.49□□□□□ -2.33
SUPT16H-206ENST00000556309 KIF21AQ7Z4S6 1674 aa0.49□□□□□ -2.33
SUPT16H-206ENST00000556309 MED1Q15648 1581 aaPredicted RBP0.49□□□□□ -2.33
SUPT16H-206ENST00000556309 ARHGAP5Q13017 1502 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 URB2Q14146 1524 aaKnown RBP0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 DUOX2Q9NRD8 1548 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 ATP10BO94823 1461 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 ERVK-7P63135 1459 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 NCOA2Q15596 1464 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 MBD5Q9P267 1494 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 NRXN1Q9ULB1 1477 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 GPR98Q8WXG9 6306 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 ABCC5O15440 1437 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 KIF1BO60333 1816 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 IGLV3-32A0A0A0MS00 114 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 TRAV1-1A0A0B4J248 108 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 TRBV7-7A0A0K0K1E9 115 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 TRBV10-3A0A0K0K1G6 114 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 hADV29S1A0JD25 119 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 H3BRM9 83 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 M0R378 163 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 GNGT2O14610 69 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 NDUFB1O75438 58 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 ERC2-IT1O76042 136 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 SFT2D2O95562 160 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 IGKV1-5P01602 117 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 IGKCP01834 107 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 CD3DP04234 171 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 ASAH2BP0C7U1 165 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 PIRTP0C851 137 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 IGLC1P0CG04 106 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 SLC25A6P12236 298 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 CCL4P13236 92 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 ADCYAP1P18509 176 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 FAUP35544 74 aaKnown RBP0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 SSR2P43308 183 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 EDDM3BP56851 147 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 GNG11P61952 73 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 SNRPD3P62318 126 aaKnown RBP0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 BLCAPP62952 87 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 DYNLT1P63172 113 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 SERF2P84101 59 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 FAM74A1Q5RGS3 127 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 TMEM170BQ5T4T1 132 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 FAM74A4Q5TZK3 123 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 ZNF818PQ6ZRF7 136 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 C6orf201Q7Z4U5 140 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 EXOC3-AS1Q8N2X6 119 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 SERP2Q8N6R1 65 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 PFN4Q8NHR9 129 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 CLEC2BQ92478 149 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 DPH3Q96FX2 82 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 TMEM141Q96I45 108 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 AMELXQ99217 191 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 LIMD2Q9BT23 127 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 SPCS1Q9Y6A9 102 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 COL4A5P29400 1685 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 RIMBP3CA6NJZ7 1639 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 RIMBP3BA6NNM3 1639 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 HECW1Q76N89 1606 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 PTPN23Q9H3S7 1636 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 RIMBP3Q9UFD9 1639 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 MAP3K4Q9Y6R4 1608 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 UNC13BO14795 1591 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 TIAM1Q13009 1591 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 DNMBPQ6XZF7 1577 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 THOC2Q8NI27 1593 aaKnown RBP0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 SETBP1Q9Y6X0 1596 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 EFCAB5A4FU69 1503 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 CDK13Q14004 1512 aaKnown RBP0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 ABCA10Q8WWZ4 1543 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 COL1A1P02452 1464 aaPredicted RBP0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 FANCD2Q9BXW9 1451 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 CDK12Q9NYV4 1490 aaPredicted RBP0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 SHANK2Q9UPX8 1470 aa0.48□□□□□ -2.33
SUPT16H-206ENST00000556309 C10orf71Q711Q0 1435 aa0.47□□□□□ -2.33
SUPT16H-206ENST00000556309 CHD1O14646 1710 aa0.47□□□□□ -2.33
SUPT16H-206ENST00000556309 TRPM1Q7Z4N2 1603 aa0.47□□□□□ -2.33
SUPT16H-206ENST00000556309 IGKV1D-42A0A075B6H8 117 aa0.47□□□□□ -2.33
SUPT16H-206ENST00000556309 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.47□□□□□ -2.33
SUPT16H-206ENST00000556309 A0A087WSZ3 146 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms