RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 MCRIP2Q9BUT9 160 aaKnown RBP12.91□□□□□ -0.34
SHOX-204ENST00000554971 PEMTQ9UBM1 199 aa12.91□□□□□ -0.34
SHOX-204ENST00000554971 SELENOKQ9Y6D0 94 aa12.91□□□□□ -0.34
SHOX-204ENST00000554971 IGLV2-18A0A075B6J9 118 aa12.9□□□□□ -0.34
SHOX-204ENST00000554971 K7EMI3 77 aa12.9□□□□□ -0.34
SHOX-204ENST00000554971 ATP5LO75964 103 aa12.9□□□□□ -0.34
SHOX-204ENST00000554971 EVI2AP22794 236 aa12.9□□□□□ -0.34
SHOX-204ENST00000554971 RHPN1-AS1Q9BWJ2 59 aa12.9□□□□□ -0.34
SHOX-204ENST00000554971 ID1P41134 155 aa12.9□□□□□ -0.35
SHOX-204ENST00000554971 C9orf66Q5T8R8 295 aa12.9□□□□□ -0.35
SHOX-204ENST00000554971 ZMAT4Q9H898 229 aa12.9□□□□□ -0.35
SHOX-204ENST00000554971 UFC1Q9Y3C8 167 aa12.9□□□□□ -0.35
SHOX-204ENST00000554971 IGLV1-51P01701 117 aa12.89□□□□□ -0.35
SHOX-204ENST00000554971 NPSP0C0P6 89 aa12.89□□□□□ -0.35
SHOX-204ENST00000554971 BOD1L2Q8IYS8 172 aa12.89□□□□□ -0.35
SHOX-204ENST00000554971 NRACQ8N912 160 aa12.89□□□□□ -0.35
SHOX-204ENST00000554971 PPP1R17O96001 155 aa12.88□□□□□ -0.35
SHOX-204ENST00000554971 ASIPP42127 132 aa12.88□□□□□ -0.35
SHOX-204ENST00000554971 KIR3DS1Q14943 382 aa12.88□□□□□ -0.35
SHOX-204ENST00000554971 FGF6P10767 208 aa12.88□□□□□ -0.35
SHOX-204ENST00000554971 INSL3P51460 131 aa12.88□□□□□ -0.35
SHOX-204ENST00000554971 KRTAP10-11P60412 298 aa12.88□□□□□ -0.35
SHOX-204ENST00000554971 SEC11AP67812 179 aa12.88□□□□□ -0.35
SHOX-204ENST00000554971 LAGE3Q14657 143 aa12.88□□□□□ -0.35
SHOX-204ENST00000554971 EGFEM1PQ0D2K5 195 aa12.87□□□□□ -0.35
SHOX-204ENST00000554971 UBE2V1Q13404 147 aa12.87□□□□□ -0.35
SHOX-204ENST00000554971 BEAN1Q3B7T3 259 aa12.87□□□□□ -0.35
SHOX-204ENST00000554971 PRR9Q5T870 116 aa12.87□□□□□ -0.35
SHOX-204ENST00000554971 C20orf78Q9BR46 151 aa12.87□□□□□ -0.35
SHOX-204ENST00000554971 M0R381 172 aa12.86□□□□□ -0.35
SHOX-204ENST00000554971 RPL11P62913 178 aaKnown RBP12.86□□□□□ -0.35
SHOX-204ENST00000554971 KPRPQ5T749 579 aaPredicted RBP12.86□□□□□ -0.35
SHOX-204ENST00000554971 H3BVH4 76 aa12.86□□□□□ -0.35
SHOX-204ENST00000554971 S100A4P26447 101 aaKnown RBP12.86□□□□□ -0.35
SHOX-204ENST00000554971 DEFB114Q30KQ6 69 aa12.86□□□□□ -0.35
SHOX-204ENST00000554971 CD300EQ496F6 205 aaPredicted RBP12.86□□□□□ -0.35
SHOX-204ENST00000554971 ANKRD39Q53RE8 183 aa12.86□□□□□ -0.35
SHOX-204ENST00000554971 C2orf91Q6ZV80 131 aa12.86□□□□□ -0.35
SHOX-204ENST00000554971 DPH3P1Q9H4G8 78 aa12.86□□□□□ -0.35
SHOX-204ENST00000554971 COL7A1Q02388 2944 aa12.85□□□□□ -0.35
SHOX-204ENST00000554971 GAS8-AS1O95177 125 aa12.85□□□□□ -0.35
SHOX-204ENST00000554971 ODF3Q96PU9 254 aa12.85□□□□□ -0.35
SHOX-204ENST00000554971 PRSS1P07477 247 aa12.84□□□□□ -0.35
SHOX-204ENST00000554971 SMIM17P0DL12 118 aa12.84□□□□□ -0.35
SHOX-204ENST00000554971 ODF1Q14990 250 aa12.84□□□□□ -0.35
SHOX-204ENST00000554971 NBEAL2Q6ZNJ1 2754 aa12.84□□□□□ -0.35
SHOX-204ENST00000554971 TGP01266 2768 aa12.84□□□□□ -0.35
SHOX-204ENST00000554971 HLA-DRB4P13762 266 aa12.84□□□□□ -0.35
SHOX-204ENST00000554971 GATA1P15976 413 aaPredicted RBP12.84□□□□□ -0.35
SHOX-204ENST00000554971 PTTG1IPP53801 180 aa12.84□□□□□ -0.35
SHOX-204ENST00000554971 FXYD7P58549 80 aa12.84□□□□□ -0.35
SHOX-204ENST00000554971 ORMDL2Q53FV1 153 aa12.84□□□□□ -0.35
SHOX-204ENST00000554971 TMEM97Q5BJF2 176 aa12.84□□□□□ -0.35
SHOX-204ENST00000554971 PHLDA3Q9Y5J5 127 aa12.84□□□□□ -0.35
SHOX-204ENST00000554971 HLA-DRB4X5D2U9 266 aa12.84□□□□□ -0.35
SHOX-204ENST00000554971 DNAH9Q9NYC9 4486 aa12.83□□□□□ -0.36
SHOX-204ENST00000554971 KLLNB2CW77 178 aa12.83□□□□□ -0.36
SHOX-204ENST00000554971 NXPH4O95158 308 aa12.83□□□□□ -0.36
SHOX-204ENST00000554971 TMEM61Q8N0U2 210 aa12.83□□□□□ -0.36
SHOX-204ENST00000554971 POM121L12Q8N7R1 296 aa12.83□□□□□ -0.36
SHOX-204ENST00000554971 TAX1BP3O14907 124 aa12.82□□□□□ -0.36
SHOX-204ENST00000554971 ANXA2RQ3ZCQ2 193 aa12.82□□□□□ -0.36
SHOX-204ENST00000554971 SMIM2Q9BVW6 85 aa12.82□□□□□ -0.36
SHOX-204ENST00000554971 LINC01549A6NIU2 74 aa12.82□□□□□ -0.36
SHOX-204ENST00000554971 IGKCP01834 107 aa12.82□□□□□ -0.36
SHOX-204ENST00000554971 PRB2P02812 416 aaPredicted RBP12.82□□□□□ -0.36
SHOX-204ENST00000554971 RNASE4P34096 147 aaKnown RBP12.82□□□□□ -0.36
SHOX-204ENST00000554971 HSD52Q0P140 79 aa12.82□□□□□ -0.36
SHOX-204ENST00000554971 DYNLRB2Q8TF09 96 aa12.82□□□□□ -0.36
SHOX-204ENST00000554971 DCANP1Q8TF63 244 aa12.82□□□□□ -0.36
SHOX-204ENST00000554971 DKK2Q9UBU2 259 aa12.82□□□□□ -0.36
SHOX-204ENST00000554971 DPM2O94777 84 aa12.81□□□□□ -0.36
SHOX-204ENST00000554971 C18orf15Q96N68 181 aa12.81□□□□□ -0.36
SHOX-204ENST00000554971 AP1S3Q96PC3 154 aa12.81□□□□□ -0.36
SHOX-204ENST00000554971 HHLA3Q9XRX5 114 aa12.81□□□□□ -0.36
SHOX-204ENST00000554971 A6NDN8 102 aa12.8□□□□□ -0.36
SHOX-204ENST00000554971 RPL32P62910 135 aaKnown RBP12.8□□□□□ -0.36
SHOX-204ENST00000554971 Q6ZQT7 251 aa12.8□□□□□ -0.36
SHOX-204ENST00000554971 HIGD1BQ9P298 99 aa12.8□□□□□ -0.36
SHOX-204ENST00000554971 TRAV12-1A0A0B4J245 112 aa12.8□□□□□ -0.36
SHOX-204ENST00000554971 SUMO2P61956 95 aaKnown RBP12.8□□□□□ -0.36
SHOX-204ENST00000554971 TP73-AS1Q9UF72 201 aa12.8□□□□□ -0.36
SHOX-204ENST00000554971 CCL25O15444 150 aa12.78□□□□□ -0.36
SHOX-204ENST00000554971 ZNF256Q9Y2P7 627 aaPredicted RBP12.78□□□□□ -0.36
SHOX-204ENST00000554971 A0A087WX48 190 aa12.78□□□□□ -0.36
SHOX-204ENST00000554971 TRAV26-2A0A0B4J265 109 aa12.78□□□□□ -0.36
SHOX-204ENST00000554971 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.78□□□□□ -0.36
SHOX-204ENST00000554971 RNASE3P12724 160 aaKnown RBP12.78□□□□□ -0.36
SHOX-204ENST00000554971 PLNP26678 52 aa12.78□□□□□ -0.36
SHOX-204ENST00000554971 SNRPD3P62318 126 aaKnown RBP12.78□□□□□ -0.36
SHOX-204ENST00000554971 VAMP3Q15836 100 aa12.78□□□□□ -0.36
SHOX-204ENST00000554971 FAM159AQ6UWV7 190 aa12.78□□□□□ -0.36
SHOX-204ENST00000554971 AGRNO00468 2067 aa12.77□□□□□ -0.37
SHOX-204ENST00000554971 RASL10AQ92737 203 aa12.77□□□□□ -0.37
SHOX-204ENST00000554971 IGKV3-7A0A075B6H7 116 aa12.76□□□□□ -0.37
SHOX-204ENST00000554971 F6UB75 175 aa12.76□□□□□ -0.37
SHOX-204ENST00000554971 J3KRW8 73 aa12.76□□□□□ -0.37
SHOX-204ENST00000554971 WFDC3Q8IUB2 231 aa12.76□□□□□ -0.37
SHOX-204ENST00000554971 TOMM6Q96B49 74 aa12.76□□□□□ -0.37
SHOX-204ENST00000554971 TENM3Q9P273 2699 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms