RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 VAX2Q9UIW0 290 aa7.27□□□□□ -1.25
SHMT2-213ENST00000554600 FAT2Q9NYQ8 4349 aa7.27□□□□□ -1.25
SHMT2-213ENST00000554600 MUC21A0A0G2JKD1 596 aa7.26□□□□□ -1.25
SHMT2-213ENST00000554600 MUC21A0A140T8X8 626 aa7.26□□□□□ -1.25
SHMT2-213ENST00000554600 CRYGDP07320 174 aa7.26□□□□□ -1.25
SHMT2-213ENST00000554600 C14orf178Q8N769 122 aaPredicted RBP7.26□□□□□ -1.25
SHMT2-213ENST00000554600 OR10AG1Q8NH19 301 aa7.26□□□□□ -1.25
SHMT2-213ENST00000554600 SFRP2Q96HF1 295 aa7.26□□□□□ -1.25
SHMT2-213ENST00000554600 GTSF1LQ9H1H1 148 aa7.26□□□□□ -1.25
SHMT2-213ENST00000554600 TNFRSF18Q9Y5U5 241 aa7.26□□□□□ -1.25
SHMT2-213ENST00000554600 ABCA13Q86UQ4 5058 aa7.25□□□□□ -1.25
SHMT2-213ENST00000554600 IGHV3-38A0A0C4DH36 116 aa7.25□□□□□ -1.25
SHMT2-213ENST00000554600 C16orf90A8MZG2 172 aa7.25□□□□□ -1.25
SHMT2-213ENST00000554600 DNAH10OSP0CZ25 163 aa7.25□□□□□ -1.25
SHMT2-213ENST00000554600 MED14OSP0DP75 135 aa7.25□□□□□ -1.25
SHMT2-213ENST00000554600 BTF3P20290 206 aaKnown RBP7.25□□□□□ -1.25
SHMT2-213ENST00000554600 TIRAPP58753 221 aa7.25□□□□□ -1.25
SHMT2-213ENST00000554600 ZNF56Q15929 161 aa7.25□□□□□ -1.25
SHMT2-213ENST00000554600 SPANXN1Q5VSR9 72 aa7.25□□□□□ -1.25
SHMT2-213ENST00000554600 NFE4Q86UQ8 179 aa7.25□□□□□ -1.25
SHMT2-213ENST00000554600 TPPP3Q9BW30 176 aa7.25□□□□□ -1.25
SHMT2-213ENST00000554600 SCRT2Q9NQ03 307 aa7.25□□□□□ -1.25
SHMT2-213ENST00000554600 MSRB1Q9NZV6 116 aa7.25□□□□□ -1.25
SHMT2-213ENST00000554600 PKD1P98161 4303 aa7.24□□□□□ -1.25
SHMT2-213ENST00000554600 EREGO14944 169 aa7.24□□□□□ -1.25
SHMT2-213ENST00000554600 IGHV3-30P01768 117 aa7.24□□□□□ -1.25
SHMT2-213ENST00000554600 IGHV3-33P01772 117 aa7.24□□□□□ -1.25
SHMT2-213ENST00000554600 CXCL1P09341 107 aa7.24□□□□□ -1.25
SHMT2-213ENST00000554600 IGHV3-30-3P0DP02 117 aa7.24□□□□□ -1.25
SHMT2-213ENST00000554600 IGHV3-30-5P0DP03 117 aa7.24□□□□□ -1.25
SHMT2-213ENST00000554600 GZMBP10144 247 aa7.24□□□□□ -1.25
SHMT2-213ENST00000554600 LELP1Q5T871 98 aa7.24□□□□□ -1.25
SHMT2-213ENST00000554600 UFSP1Q6NVU6 142 aa7.24□□□□□ -1.25
SHMT2-213ENST00000554600 SPATA12Q7Z6I5 190 aa7.24□□□□□ -1.25
SHMT2-213ENST00000554600 C10orf126Q8N4M7 172 aa7.24□□□□□ -1.25
SHMT2-213ENST00000554600 OR2D3Q8NGH3 330 aa7.24□□□□□ -1.25
SHMT2-213ENST00000554600 PKHD1P08F94 4074 aa7.23□□□□□ -1.25
SHMT2-213ENST00000554600 RBFOX3A6NFN3 312 aa7.23□□□□□ -1.25
SHMT2-213ENST00000554600 F5H697 171 aa7.23□□□□□ -1.25
SHMT2-213ENST00000554600 K7EP13 123 aa7.23□□□□□ -1.25
SHMT2-213ENST00000554600 P01737 135 aa7.23□□□□□ -1.25
SHMT2-213ENST00000554600 SMIM17P0DL12 118 aa7.23□□□□□ -1.25
SHMT2-213ENST00000554600 CEBPGP53567 150 aa7.23□□□□□ -1.25
SHMT2-213ENST00000554600 ERVFC1-1P60608 527 aa7.23□□□□□ -1.25
SHMT2-213ENST00000554600 RPS20P60866 119 aaKnown RBP7.23□□□□□ -1.25
SHMT2-213ENST00000554600 LYPD6BQ8NI32 183 aa7.23□□□□□ -1.25
SHMT2-213ENST00000554600 Q9HAA7 133 aa7.23□□□□□ -1.25
SHMT2-213ENST00000554600 BIN3Q9NQY0 253 aa7.23□□□□□ -1.25
SHMT2-213ENST00000554600 Q9UF83 564 aa7.23□□□□□ -1.25
SHMT2-213ENST00000554600 XKRY2A2RUG3 117 aa7.22□□□□□ -1.25
SHMT2-213ENST00000554600 SNAI2O43623 268 aa7.22□□□□□ -1.25
SHMT2-213ENST00000554600 IGLV2-8P01709 118 aa7.22□□□□□ -1.25
SHMT2-213ENST00000554600 OR5AL1P0C617 328 aa7.22□□□□□ -1.25
SHMT2-213ENST00000554600 RPL36AP83881 106 aaKnown RBP7.22□□□□□ -1.25
SHMT2-213ENST00000554600 LINC01556Q5JQF7 62 aa7.22□□□□□ -1.25
SHMT2-213ENST00000554600 Q6ZRN7 208 aaPredicted RBP7.22□□□□□ -1.25
SHMT2-213ENST00000554600 FER1L6-AS1Q8NA97 138 aa7.22□□□□□ -1.25
SHMT2-213ENST00000554600 RPL36ALQ969Q0 106 aaKnown RBP7.22□□□□□ -1.25
SHMT2-213ENST00000554600 SMIM12Q96EX1 92 aa7.22□□□□□ -1.25
SHMT2-213ENST00000554600 TRBV20OR9-2A0A075B6H5 130 aa7.21□□□□□ -1.26
SHMT2-213ENST00000554600 A0A087WWC5 75 aa7.21□□□□□ -1.26
SHMT2-213ENST00000554600 PSCAO43653 123 aa7.21□□□□□ -1.26
SHMT2-213ENST00000554600 RAB4BP61018 213 aa7.21□□□□□ -1.26
SHMT2-213ENST00000554600 AP1S3Q96PC3 154 aa7.21□□□□□ -1.26
SHMT2-213ENST00000554600 SSBP4Q9BWG4 385 aaPredicted RBP7.21□□□□□ -1.26
SHMT2-213ENST00000554600 TRBV10-1A0A0K0K1A3 114 aa7.2□□□□□ -1.26
SHMT2-213ENST00000554600 C19orf71A6NCJ1 209 aa7.2□□□□□ -1.26
SHMT2-213ENST00000554600 TMEM250H0YL14 139 aa7.2□□□□□ -1.26
SHMT2-213ENST00000554600 MGPP08493 103 aa7.2□□□□□ -1.26
SHMT2-213ENST00000554600 LINC00694P0DN24 101 aa7.2□□□□□ -1.26
SHMT2-213ENST00000554600 TOR2AQ5JU69 321 aa7.2□□□□□ -1.26
SHMT2-213ENST00000554600 TEX261Q6UWH6 196 aa7.2□□□□□ -1.26
SHMT2-213ENST00000554600 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.2□□□□□ -1.26
SHMT2-213ENST00000554600 EIF5A2Q9GZV4 153 aaKnown RBP7.2□□□□□ -1.26
SHMT2-213ENST00000554600 URGCP-MRPS24S4R325 110 aa7.2□□□□□ -1.26
SHMT2-213ENST00000554600 TRBV7-3A0A075B6L6 115 aa7.19□□□□□ -1.26
SHMT2-213ENST00000554600 IBA57-AS1B1ANH7 110 aa7.19□□□□□ -1.26
SHMT2-213ENST00000554600 IGLC6P0CF74 106 aa7.19□□□□□ -1.26
SHMT2-213ENST00000554600 KRTAP10-2P60368 255 aa7.19□□□□□ -1.26
SHMT2-213ENST00000554600 CACNG7P62955 275 aa7.19□□□□□ -1.26
SHMT2-213ENST00000554600 Q8N3U1 123 aa7.19□□□□□ -1.26
SHMT2-213ENST00000554600 NUDT10Q8NFP7 164 aa7.19□□□□□ -1.26
SHMT2-213ENST00000554600 OCC1Q8TAD7 63 aa7.19□□□□□ -1.26
SHMT2-213ENST00000554600 NUDT11Q96G61 164 aa7.19□□□□□ -1.26
SHMT2-213ENST00000554600 NDUFS6O75380 124 aaKnown RBP7.18□□□□□ -1.26
SHMT2-213ENST00000554600 UBE2D3P61077 147 aa7.18□□□□□ -1.26
SHMT2-213ENST00000554600 UBE2D2P62837 147 aa7.18□□□□□ -1.26
SHMT2-213ENST00000554600 KCNIP4Q6PIL6 250 aa7.18□□□□□ -1.26
SHMT2-213ENST00000554600 LYZL1Q6UWQ5 148 aa7.18□□□□□ -1.26
SHMT2-213ENST00000554600 NEXN-AS1Q8NBZ9 246 aa7.18□□□□□ -1.26
SHMT2-213ENST00000554600 FAM210AQ96ND0 272 aa7.18□□□□□ -1.26
SHMT2-213ENST00000554600 RNASE7Q9H1E1 156 aaKnown RBP7.18□□□□□ -1.26
SHMT2-213ENST00000554600 DNAH11Q96DT5 4516 aa7.18□□□□□ -1.26
SHMT2-213ENST00000554600 HERC1Q15751 4861 aa7.17□□□□□ -1.26
SHMT2-213ENST00000554600 A0A087WTM6 91 aa7.17□□□□□ -1.26
SHMT2-213ENST00000554600 F2Z2F3 143 aa7.17□□□□□ -1.26
SHMT2-213ENST00000554600 K7EN84 100 aa7.17□□□□□ -1.26
SHMT2-213ENST00000554600 TRGC1P0CF51 173 aa7.17□□□□□ -1.26
SHMT2-213ENST00000554600 FUSP35637 526 aaKnown RBP eCLIP7.17□□□□□ -1.26
SHMT2-213ENST00000554600 DAZ4Q86SG3 579 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms