RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 LELP1Q5T871 98 aa13.92□□□□□ -0.18
HIF1A-206ENST00000553999 NFE4Q86UQ8 179 aa13.92□□□□□ -0.18
HIF1A-206ENST00000553999 OR10AG1Q8NH19 301 aa13.92□□□□□ -0.18
HIF1A-206ENST00000553999 EREGO14944 169 aa13.91□□□□□ -0.18
HIF1A-206ENST00000553999 SULT1A2P50226 295 aa13.91□□□□□ -0.18
HIF1A-206ENST00000553999 TIRAPP58753 221 aa13.91□□□□□ -0.18
HIF1A-206ENST00000553999 CENPWQ5EE01 88 aa13.91□□□□□ -0.18
HIF1A-206ENST00000553999 EIF5AL1Q6IS14 154 aaKnown RBP13.91□□□□□ -0.18
HIF1A-206ENST00000553999 SFRP2Q96HF1 295 aa13.91□□□□□ -0.18
HIF1A-206ENST00000553999 SCRT2Q9NQ03 307 aa13.91□□□□□ -0.18
HIF1A-206ENST00000553999 RHODO00212 210 aa13.9□□□□□ -0.18
HIF1A-206ENST00000553999 C1QBP02746 253 aa13.9□□□□□ -0.18
HIF1A-206ENST00000553999 AKAP14Q86UN6 197 aa13.9□□□□□ -0.18
HIF1A-206ENST00000553999 C10orf126Q8N4M7 172 aa13.9□□□□□ -0.18
HIF1A-206ENST00000553999 A0A087WTM6 91 aa13.89□□□□□ -0.19
HIF1A-206ENST00000553999 RAB19A4D1S5 217 aa13.89□□□□□ -0.19
HIF1A-206ENST00000553999 PSCAO43653 123 aa13.89□□□□□ -0.19
HIF1A-206ENST00000553999 LINC00694P0DN24 101 aa13.89□□□□□ -0.19
HIF1A-206ENST00000553999 RAB5CP51148 216 aa13.89□□□□□ -0.19
HIF1A-206ENST00000553999 ZNF56Q15929 161 aa13.89□□□□□ -0.19
HIF1A-206ENST00000553999 LINC01556Q5JQF7 62 aa13.89□□□□□ -0.19
HIF1A-206ENST00000553999 PIK3CD-AS1Q5SR53 167 aa13.89□□□□□ -0.19
HIF1A-206ENST00000553999 MLST8Q9BVC4 326 aa13.89□□□□□ -0.19
HIF1A-206ENST00000553999 TPPP3Q9BW30 176 aa13.89□□□□□ -0.19
HIF1A-206ENST00000553999 KRTAP4-5Q9BYR2 181 aa13.89□□□□□ -0.19
HIF1A-206ENST00000553999 TEX46H3BTG2 121 aa13.88□□□□□ -0.19
HIF1A-206ENST00000553999 GZMBP10144 247 aa13.88□□□□□ -0.19
HIF1A-206ENST00000553999 MAPKAPK5-AS1Q8N8E1 139 aa13.88□□□□□ -0.19
HIF1A-206ENST00000553999 TRAV1-1A0A0B4J248 108 aa13.87□□□□□ -0.19
HIF1A-206ENST00000553999 SLC51BQ86UW2 128 aa13.87□□□□□ -0.19
HIF1A-206ENST00000553999 C11orf52Q96A22 123 aa13.87□□□□□ -0.19
HIF1A-206ENST00000553999 SPANXN1Q5VSR9 72 aa13.86□□□□□ -0.19
HIF1A-206ENST00000553999 C9orf62Q8N4C0 152 aa13.86□□□□□ -0.19
HIF1A-206ENST00000553999 RBFOX3A6NFN3 312 aa13.85□□□□□ -0.19
HIF1A-206ENST00000553999 IFNA1P01562 189 aa13.85□□□□□ -0.19
HIF1A-206ENST00000553999 DAZ4Q86SG3 579 aaKnown RBP13.85□□□□□ -0.19
HIF1A-206ENST00000553999 DAZ3Q9NR90 486 aaKnown RBP13.85□□□□□ -0.19
HIF1A-206ENST00000553999 MED9Q9NWA0 146 aa13.85□□□□□ -0.19
HIF1A-206ENST00000553999 IBA57-AS1B1ANH7 110 aa13.84□□□□□ -0.19
HIF1A-206ENST00000553999 CDK2AP2O75956 126 aa13.84□□□□□ -0.19
HIF1A-206ENST00000553999 BCL2P10415 239 aa13.84□□□□□ -0.19
HIF1A-206ENST00000553999 GNG4P50150 75 aa13.84□□□□□ -0.19
HIF1A-206ENST00000553999 MEF2BQ02080 365 aaPredicted RBP13.84□□□□□ -0.19
HIF1A-206ENST00000553999 F5H697 171 aa13.83□□□□□ -0.2
HIF1A-206ENST00000553999 K7EP13 123 aa13.83□□□□□ -0.2
HIF1A-206ENST00000553999 IGLV2-8P01709 118 aa13.83□□□□□ -0.2
HIF1A-206ENST00000553999 ALKAL2Q6UX46 152 aa13.83□□□□□ -0.2
HIF1A-206ENST00000553999 OR2D3Q8NGH3 330 aa13.83□□□□□ -0.2
HIF1A-206ENST00000553999 DAZAP1Q96EP5 407 aaKnown RBP13.83□□□□□ -0.2
HIF1A-206ENST00000553999 RYR1P21817 5038 aa13.83□□□□□ -0.2
HIF1A-206ENST00000553999 NKX2-5P52952 324 aaPredicted RBP13.82□□□□□ -0.2
HIF1A-206ENST00000553999 SNAI2O43623 268 aa13.81□□□□□ -0.2
HIF1A-206ENST00000553999 RPL36AP83881 106 aaKnown RBP13.81□□□□□ -0.2
HIF1A-206ENST00000553999 RPL36ALQ969Q0 106 aaKnown RBP13.81□□□□□ -0.2
HIF1A-206ENST00000553999 LRP1BQ9NZR2 4599 aa13.8□□□□□ -0.2
HIF1A-206ENST00000553999 TRBV20OR9-2A0A075B6H5 130 aa13.8□□□□□ -0.2
HIF1A-206ENST00000553999 LECT2O14960 151 aa13.8□□□□□ -0.2
HIF1A-206ENST00000553999 MGPP08493 103 aa13.8□□□□□ -0.2
HIF1A-206ENST00000553999 CXCL1P09341 107 aa13.8□□□□□ -0.2
HIF1A-206ENST00000553999 OR5AL1P0C617 328 aa13.8□□□□□ -0.2
HIF1A-206ENST00000553999 DNAJC30Q96LL9 226 aa13.8□□□□□ -0.2
HIF1A-206ENST00000553999 PGPEP1Q9NXJ5 209 aa13.8□□□□□ -0.2
HIF1A-206ENST00000553999 A0A1B0GVG6 124 aa13.79□□□□□ -0.2
HIF1A-206ENST00000553999 PDE6DO43924 150 aa13.79□□□□□ -0.2
HIF1A-206ENST00000553999 KRTAP10-1P60331 282 aa13.79□□□□□ -0.2
HIF1A-206ENST00000553999 FER1L6-AS1Q8NA97 138 aa13.79□□□□□ -0.2
HIF1A-206ENST00000553999 NEXN-AS1Q8NBZ9 246 aa13.79□□□□□ -0.2
HIF1A-206ENST00000553999 VAX2Q9UIW0 290 aa13.79□□□□□ -0.2
HIF1A-206ENST00000553999 URGCP-MRPS24S4R325 110 aa13.79□□□□□ -0.2
HIF1A-206ENST00000553999 A0A087WWC5 75 aa13.78□□□□□ -0.2
HIF1A-206ENST00000553999 UBE2D3P61077 147 aa13.78□□□□□ -0.2
HIF1A-206ENST00000553999 UBE2D2P62837 147 aa13.78□□□□□ -0.2
HIF1A-206ENST00000553999 HAMPP81172 84 aa13.78□□□□□ -0.2
HIF1A-206ENST00000553999 SSBP4Q9BWG4 385 aaPredicted RBP13.78□□□□□ -0.2
HIF1A-206ENST00000553999 PCLOQ9Y6V0 5065 aa13.77□□□□□ -0.2
HIF1A-206ENST00000553999 LRCOL1A6NCL2 159 aa13.77□□□□□ -0.21
HIF1A-206ENST00000553999 P01737 135 aa13.77□□□□□ -0.21
HIF1A-206ENST00000553999 SMIM17P0DL12 118 aa13.77□□□□□ -0.21
HIF1A-206ENST00000553999 RAB4BP61018 213 aa13.77□□□□□ -0.21
HIF1A-206ENST00000553999 WFDC2Q14508 124 aa13.77□□□□□ -0.21
HIF1A-206ENST00000553999 AP1S3Q96PC3 154 aa13.77□□□□□ -0.21
HIF1A-206ENST00000553999 KLK12Q9UKR0 248 aa13.77□□□□□ -0.21
HIF1A-206ENST00000553999 BOLA1Q9Y3E2 137 aa13.77□□□□□ -0.21
HIF1A-206ENST00000553999 HSPG2P98160 4391 aa13.76□□□□□ -0.21
HIF1A-206ENST00000553999 TRBV7-3A0A075B6L6 115 aa13.76□□□□□ -0.21
HIF1A-206ENST00000553999 IGLV5-52A0A0A0MRZ9 124 aa13.76□□□□□ -0.21
HIF1A-206ENST00000553999 TRBV10-1A0A0K0K1A3 114 aa13.76□□□□□ -0.21
HIF1A-206ENST00000553999 C19orf71A6NCJ1 209 aa13.76□□□□□ -0.21
HIF1A-206ENST00000553999 CEBPGP53567 150 aa13.76□□□□□ -0.21
HIF1A-206ENST00000553999 CDPF1Q6NVV7 123 aa13.76□□□□□ -0.21
HIF1A-206ENST00000553999 NIT1Q86X76 327 aa13.76□□□□□ -0.21
HIF1A-206ENST00000553999 TMEM262E9PQX1 116 aa13.74□□□□□ -0.21
HIF1A-206ENST00000553999 IGLC6P0CF74 106 aa13.74□□□□□ -0.21
HIF1A-206ENST00000553999 RPS20P60866 119 aaKnown RBP13.74□□□□□ -0.21
HIF1A-206ENST00000553999 LAGE3Q14657 143 aa13.74□□□□□ -0.21
HIF1A-206ENST00000553999 DEFB104AQ8WTQ1 72 aa13.74□□□□□ -0.21
HIF1A-206ENST00000553999 A0A087WX48 190 aa13.73□□□□□ -0.21
HIF1A-206ENST00000553999 LYZL1Q6UWQ5 148 aa13.73□□□□□ -0.21
HIF1A-206ENST00000553999 Q8N814 137 aa13.73□□□□□ -0.21
HIF1A-206ENST00000553999 UBE2WQ96B02 151 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms