RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 H3BVH4 76 aa8.39□□□□□ -1.07
TUBA1C-209ENST00000552448 IGHV3-23P01764 117 aa8.39□□□□□ -1.07
TUBA1C-209ENST00000552448 MSMBP08118 114 aa8.39□□□□□ -1.07
TUBA1C-209ENST00000552448 GATA1P15976 413 aaPredicted RBP8.39□□□□□ -1.07
TUBA1C-209ENST00000552448 CHD6Q8TD26 2715 aa8.38□□□□□ -1.07
TUBA1C-209ENST00000552448 IGHV1-69DA0A0B4J2H0 117 aa8.38□□□□□ -1.07
TUBA1C-209ENST00000552448 A0A0J9YY99 117 aa8.38□□□□□ -1.07
TUBA1C-209ENST00000552448 M0R381 172 aa8.38□□□□□ -1.07
TUBA1C-209ENST00000552448 ATP6V0E1O15342 81 aa8.38□□□□□ -1.07
TUBA1C-209ENST00000552448 ARL3P36405 182 aa8.38□□□□□ -1.07
TUBA1C-209ENST00000552448 SHISA2Q6UWI4 295 aa8.38□□□□□ -1.07
TUBA1C-209ENST00000552448 MRPL53Q96EL3 112 aaKnown RBP8.38□□□□□ -1.07
TUBA1C-209ENST00000552448 TNFRSF18Q9Y5U5 241 aa8.38□□□□□ -1.07
TUBA1C-209ENST00000552448 LINC01548A6NM66 108 aa8.38□□□□□ -1.07
TUBA1C-209ENST00000552448 C5orf56Q8N8D9 126 aa8.38□□□□□ -1.07
TUBA1C-209ENST00000552448 SLC25A29Q8N8R3 303 aa8.38□□□□□ -1.07
TUBA1C-209ENST00000552448 Q8TAT8 98 aa8.38□□□□□ -1.07
TUBA1C-209ENST00000552448 SPANXCQ9NY87 97 aa8.38□□□□□ -1.07
TUBA1C-209ENST00000552448 IGHV1-69P01742 117 aa8.37□□□□□ -1.07
TUBA1C-209ENST00000552448 IGHV3-30P01768 117 aa8.37□□□□□ -1.07
TUBA1C-209ENST00000552448 CLEC3BP05452 202 aa8.37□□□□□ -1.07
TUBA1C-209ENST00000552448 CFC1BP0CG36 223 aa8.37□□□□□ -1.07
TUBA1C-209ENST00000552448 CFC1P0CG37 223 aa8.37□□□□□ -1.07
TUBA1C-209ENST00000552448 IGHV3-30-5P0DP03 117 aa8.37□□□□□ -1.07
TUBA1C-209ENST00000552448 SUMO2P61956 95 aaKnown RBP8.37□□□□□ -1.07
TUBA1C-209ENST00000552448 ATXN8Q156A1 80 aa8.37□□□□□ -1.07
TUBA1C-209ENST00000552448 ECSCRQ19T08 205 aa8.37□□□□□ -1.07
TUBA1C-209ENST00000552448 DEFB113Q30KQ7 82 aa8.37□□□□□ -1.07
TUBA1C-209ENST00000552448 SPANXN1Q5VSR9 72 aa8.37□□□□□ -1.07
TUBA1C-209ENST00000552448 BAALCQ8WXS3 180 aa8.37□□□□□ -1.07
TUBA1C-209ENST00000552448 NRGNQ92686 78 aa8.37□□□□□ -1.07
TUBA1C-209ENST00000552448 ZFHX3Q15911 3703 aa8.37□□□□□ -1.07
TUBA1C-209ENST00000552448 CENPEQ02224 2701 aa8.36□□□□□ -1.07
TUBA1C-209ENST00000552448 IGHV3OR16-10A0A075B7F0 116 aa8.36□□□□□ -1.07
TUBA1C-209ENST00000552448 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.36□□□□□ -1.07
TUBA1C-209ENST00000552448 TRAV8-4A0A0B4J246 113 aa8.36□□□□□ -1.07
TUBA1C-209ENST00000552448 A0A0B4J2C4 111 aa8.36□□□□□ -1.07
TUBA1C-209ENST00000552448 C15orf32Q32M92 178 aa8.36□□□□□ -1.07
TUBA1C-209ENST00000552448 SMIM20Q8N5G0 67 aa8.36□□□□□ -1.07
TUBA1C-209ENST00000552448 MDFICQ9P1T7 246 aa8.36□□□□□ -1.07
TUBA1C-209ENST00000552448 ANKRD17O75179 2603 aaKnown RBP8.36□□□□□ -1.07
TUBA1C-209ENST00000552448 FBN2P35556 2912 aa8.36□□□□□ -1.07
TUBA1C-209ENST00000552448 IGKV3D-20A0A0C4DH25 116 aa8.36□□□□□ -1.07
TUBA1C-209ENST00000552448 FAM240AA0A1B0GVK7 77 aa8.36□□□□□ -1.07
TUBA1C-209ENST00000552448 G3V318 75 aa8.36□□□□□ -1.07
TUBA1C-209ENST00000552448 C2orf66Q6UXQ4 117 aa8.36□□□□□ -1.07
TUBA1C-209ENST00000552448 LINC01356Q8N9X3 169 aa8.36□□□□□ -1.07
TUBA1C-209ENST00000552448 TMEM141Q96I45 108 aa8.36□□□□□ -1.07
TUBA1C-209ENST00000552448 KIR2DL4Q99706 377 aa8.36□□□□□ -1.07
TUBA1C-209ENST00000552448 TRAV4A0A0B4J268 109 aa8.35□□□□□ -1.07
TUBA1C-209ENST00000552448 IGHV7-4-1A0A0J9YVY3 117 aa8.35□□□□□ -1.07
TUBA1C-209ENST00000552448 C11orf86A6NJI1 115 aa8.35□□□□□ -1.07
TUBA1C-209ENST00000552448 C9JAW5 83 aa8.35□□□□□ -1.07
TUBA1C-209ENST00000552448 J3QLI3 93 aa8.35□□□□□ -1.07
TUBA1C-209ENST00000552448 TRGV3P03979 118 aa8.35□□□□□ -1.07
TUBA1C-209ENST00000552448 BRD3OSQ6XYD6 125 aa8.35□□□□□ -1.07
TUBA1C-209ENST00000552448 TMEM219Q86XT9 240 aa8.35□□□□□ -1.07
TUBA1C-209ENST00000552448 RASL10AQ92737 203 aa8.35□□□□□ -1.07
TUBA1C-209ENST00000552448 PLEKHB2Q96CS7 222 aa8.35□□□□□ -1.07
TUBA1C-209ENST00000552448 LENEPQ9Y5L5 61 aa8.35□□□□□ -1.07
TUBA1C-209ENST00000552448 USP9YO00507 2555 aaPredicted RBP8.35□□□□□ -1.07
TUBA1C-209ENST00000552448 A0A096LNT2 108 aa8.34□□□□□ -1.07
TUBA1C-209ENST00000552448 CCDC179H3BU77 68 aa8.34□□□□□ -1.07
TUBA1C-209ENST00000552448 MED14OSP0DP75 135 aa8.34□□□□□ -1.07
TUBA1C-209ENST00000552448 Q8N1Y9 231 aa8.34□□□□□ -1.07
TUBA1C-209ENST00000552448 MOB4Q9Y3A3 225 aa8.34□□□□□ -1.07
TUBA1C-209ENST00000552448 SMAD5-AS1Q9Y6J3 95 aa8.34□□□□□ -1.07
TUBA1C-209ENST00000552448 IGHV3-35A0A0C4DH35 117 aa8.33□□□□□ -1.08
TUBA1C-209ENST00000552448 TRBV10-2A0A0K0K1G8 114 aa8.33□□□□□ -1.08
TUBA1C-209ENST00000552448 IGHV4-38-2P0DP08 117 aa8.33□□□□□ -1.08
TUBA1C-209ENST00000552448 C19orf54Q5BKX5 351 aa8.33□□□□□ -1.08
TUBA1C-209ENST00000552448 CCDC140Q96MF4 163 aa8.33□□□□□ -1.08
TUBA1C-209ENST00000552448 DPH3P1Q9H4G8 78 aa8.33□□□□□ -1.08
TUBA1C-209ENST00000552448 ZFAND3Q9H8U3 227 aa8.33□□□□□ -1.08
TUBA1C-209ENST00000552448 TENM4Q6N022 2769 aa8.33□□□□□ -1.08
TUBA1C-209ENST00000552448 PRB4P10163 310 aaPredicted RBP8.33□□□□□ -1.08
TUBA1C-209ENST00000552448 CRIP2P52943 208 aaPredicted RBP8.33□□□□□ -1.08
TUBA1C-209ENST00000552448 PMVKQ15126 192 aa8.33□□□□□ -1.08
TUBA1C-209ENST00000552448 CSMD2Q7Z408 3487 aa8.33□□□□□ -1.08
TUBA1C-209ENST00000552448 IGHV3OR16-8A0A075B7F1 116 aa8.32□□□□□ -1.08
TUBA1C-209ENST00000552448 TRAV26-2A0A0B4J265 109 aa8.32□□□□□ -1.08
TUBA1C-209ENST00000552448 IGHV3-33P01772 117 aa8.32□□□□□ -1.08
TUBA1C-209ENST00000552448 KRTAP10-9P60411 292 aa8.32□□□□□ -1.08
TUBA1C-209ENST00000552448 LINC01620Q4KN68 170 aa8.32□□□□□ -1.08
TUBA1C-209ENST00000552448 MEIG1Q5JSS6 88 aa8.32□□□□□ -1.08
TUBA1C-209ENST00000552448 CLEC19AQ6UXS0 136 aa8.32□□□□□ -1.08
TUBA1C-209ENST00000552448 C15orf53Q8NAA6 179 aa8.32□□□□□ -1.08
TUBA1C-209ENST00000552448 IMUPQ9GZP8 106 aa8.32□□□□□ -1.08
TUBA1C-209ENST00000552448 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.32□□□□□ -1.084e-7■■■■□ 23.5
TUBA1C-209ENST00000552448 TRBV7-1A0A0A6YYK4 115 aa8.31□□□□□ -1.08
TUBA1C-209ENST00000552448 TRAV2A0A0B4J234 112 aa8.31□□□□□ -1.08
TUBA1C-209ENST00000552448 TRAV41A0A0B4J266 112 aa8.31□□□□□ -1.08
TUBA1C-209ENST00000552448 CLPSL1A2RUU4 121 aa8.31□□□□□ -1.08
TUBA1C-209ENST00000552448 H3BMM0 161 aa8.31□□□□□ -1.08
TUBA1C-209ENST00000552448 H3BT86 120 aa8.31□□□□□ -1.08
TUBA1C-209ENST00000552448 LGALS9O00182 355 aa8.31□□□□□ -1.08
TUBA1C-209ENST00000552448 SFTA2Q6UW10 78 aa8.31□□□□□ -1.08
TUBA1C-209ENST00000552448 FAM159AQ6UWV7 190 aa8.31□□□□□ -1.08
TUBA1C-209ENST00000552448 C9orf47Q6ZRZ4 202 aa8.31□□□□□ -1.08
TUBA1C-209ENST00000552448 NTN5Q8WTR8 489 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms