RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 AP1S3Q96PC3 154 aa15.42■□□□□ 0.06
PRDM4-205ENST00000550376 IGLC3P0DOY3 106 aa15.41■□□□□ 0.06
PRDM4-205ENST00000550376 LINC00315P59091 139 aa15.41■□□□□ 0.06
PRDM4-205ENST00000550376 ODF3L2Q3SX64 289 aa15.41■□□□□ 0.06
PRDM4-205ENST00000550376 Q8N8P6 123 aa15.41■□□□□ 0.06
PRDM4-205ENST00000550376 SNHG12Q9BXW3 62 aa15.41■□□□□ 0.06
PRDM4-205ENST00000550376 NXT2Q9NPJ8 142 aaKnown RBP15.41■□□□□ 0.06
PRDM4-205ENST00000550376 LAMTOR2Q9Y2Q5 125 aa15.41■□□□□ 0.06
PRDM4-205ENST00000550376 ATRQ13535 2644 aa15.41■□□□□ 0.06
PRDM4-205ENST00000550376 F5H697 171 aa15.41■□□□□ 0.06
PRDM4-205ENST00000550376 MED14OSP0DP75 135 aa15.41■□□□□ 0.06
PRDM4-205ENST00000550376 SCGB2A2Q13296 93 aa15.41■□□□□ 0.06
PRDM4-205ENST00000550376 PET117Q6UWS5 81 aa15.41■□□□□ 0.06
PRDM4-205ENST00000550376 KIF25-AS1Q9Y6Z4 181 aa15.41■□□□□ 0.06
PRDM4-205ENST00000550376 ADARB2-AS1A8MUL3 147 aa15.4■□□□□ 0.06
PRDM4-205ENST00000550376 SAP30O75446 220 aa15.4■□□□□ 0.06
PRDM4-205ENST00000550376 PROK1P58294 105 aa15.4■□□□□ 0.06
PRDM4-205ENST00000550376 IFI27L1Q96BM0 104 aa15.39■□□□□ 0.05
PRDM4-205ENST00000550376 MRAP2Q96G30 205 aa15.39■□□□□ 0.05
PRDM4-205ENST00000550376 C20orf202A1L168 122 aa15.39■□□□□ 0.05
PRDM4-205ENST00000550376 LINC01545Q5VT33 79 aa15.39■□□□□ 0.05
PRDM4-205ENST00000550376 C9orf85Q96MD7 179 aa15.39■□□□□ 0.05
PRDM4-205ENST00000550376 SMIM17P0DL12 118 aa15.38■□□□□ 0.05
PRDM4-205ENST00000550376 FCER1GP30273 86 aa15.38■□□□□ 0.05
PRDM4-205ENST00000550376 SPAG8Q99932 426 aaPredicted RBP15.38■□□□□ 0.05
PRDM4-205ENST00000550376 TMEM160Q9NX00 188 aa15.38■□□□□ 0.05
PRDM4-205ENST00000550376 NXPH4O95158 308 aa15.38■□□□□ 0.05
PRDM4-205ENST00000550376 WFDC10AQ9H1F0 79 aa15.38■□□□□ 0.05
PRDM4-205ENST00000550376 XCL2Q9UBD3 114 aa15.38■□□□□ 0.05
PRDM4-205ENST00000550376 SUMO2P61956 95 aaKnown RBP15.37■□□□□ 0.05
PRDM4-205ENST00000550376 ZNF876PQ49A33 203 aa15.37■□□□□ 0.05
PRDM4-205ENST00000550376 Q6ZN92 141 aa15.37■□□□□ 0.05
PRDM4-205ENST00000550376 DKK2Q9UBU2 259 aa15.37■□□□□ 0.05
PRDM4-205ENST00000550376 IGHV3OR16-12A0A075B7B8 117 aa15.36■□□□□ 0.05
PRDM4-205ENST00000550376 IGHV3-73A0A0B4J1V6 119 aa15.36■□□□□ 0.05
PRDM4-205ENST00000550376 LAGE3Q14657 143 aa15.36■□□□□ 0.05
PRDM4-205ENST00000550376 BATFQ16520 125 aa15.36■□□□□ 0.05
PRDM4-205ENST00000550376 SUMO4Q6EEV6 95 aa15.36■□□□□ 0.05
PRDM4-205ENST00000550376 SMIM2Q9BVW6 85 aa15.36■□□□□ 0.05
PRDM4-205ENST00000550376 LINC01546A6NGU7 62 aa15.35■□□□□ 0.05
PRDM4-205ENST00000550376 TRAV2A0A0B4J234 112 aa15.35■□□□□ 0.05
PRDM4-205ENST00000550376 STPG4Q8N801 248 aa15.34■□□□□ 0.05
PRDM4-205ENST00000550376 NUDT3O95989 172 aa15.34■□□□□ 0.05
PRDM4-205ENST00000550376 LINC01587Q99440 93 aa15.34■□□□□ 0.05
PRDM4-205ENST00000550376 CSTL1Q9H114 145 aa15.34■□□□□ 0.05
PRDM4-205ENST00000550376 UQCR10Q9UDW1 63 aa15.34■□□□□ 0.05
PRDM4-205ENST00000550376 F8P00451 2351 aa15.33■□□□□ 0.05
PRDM4-205ENST00000550376 PRSS1P07477 247 aa15.33■□□□□ 0.05
PRDM4-205ENST00000550376 ZNF25P17030 456 aaPredicted RBP15.33■□□□□ 0.05
PRDM4-205ENST00000550376 GOLT1BQ9Y3E0 138 aa15.33■□□□□ 0.05
PRDM4-205ENST00000550376 TRRAPQ9Y4A5 3859 aa15.33■□□□□ 0.05
PRDM4-205ENST00000550376 M0R143 59 aa15.33■□□□□ 0.04
PRDM4-205ENST00000550376 CRYGDP07320 174 aa15.33■□□□□ 0.04
PRDM4-205ENST00000550376 TEP1Q99973 2627 aaKnown RBP15.33■□□□□ 0.04
PRDM4-205ENST00000550376 NDUFA7O95182 113 aa15.32■□□□□ 0.04
PRDM4-205ENST00000550376 ZNF56Q15929 161 aa15.32■□□□□ 0.04
PRDM4-205ENST00000550376 PRSS47A8MTI9 375 aa15.32■□□□□ 0.04
PRDM4-205ENST00000550376 A8MTW9 85 aa15.32■□□□□ 0.04
PRDM4-205ENST00000550376 OR11H12B2RN74 326 aa15.32■□□□□ 0.04
PRDM4-205ENST00000550376 NBEAL2Q6ZNJ1 2754 aa15.32■□□□□ 0.04
PRDM4-205ENST00000550376 STHQ8IWL8 128 aa15.32■□□□□ 0.04
PRDM4-205ENST00000550376 SPATA3Q8NHX4 192 aa15.31■□□□□ 0.04
PRDM4-205ENST00000550376 HSBP1L1C9JCN9 74 aa15.3■□□□□ 0.04
PRDM4-205ENST00000550376 AZU1P20160 251 aa15.3■□□□□ 0.04
PRDM4-205ENST00000550376 HNRNPA3P51991 378 aaKnown RBP15.3■□□□□ 0.04
PRDM4-205ENST00000550376 SYT8Q8NBV8 401 aa15.3■□□□□ 0.04
PRDM4-205ENST00000550376 JMJD8Q96S16 334 aa15.3■□□□□ 0.04
PRDM4-205ENST00000550376 TRGV11A0A075B6L2 103 aa15.3■□□□□ 0.04
PRDM4-205ENST00000550376 DEFB125Q8N687 156 aa15.3■□□□□ 0.04
PRDM4-205ENST00000550376 C20orf78Q9BR46 151 aa15.29■□□□□ 0.04
PRDM4-205ENST00000550376 TRAV25A0A0B4J276 109 aa15.29■□□□□ 0.04
PRDM4-205ENST00000550376 ANKRD39Q53RE8 183 aa15.29■□□□□ 0.04
PRDM4-205ENST00000550376 POM121L12Q8N7R1 296 aa15.29■□□□□ 0.04
PRDM4-205ENST00000550376 P0DMU3 169 aa15.28■□□□□ 0.04
PRDM4-205ENST00000550376 FAM231AP0DMU4 169 aa15.28■□□□□ 0.04
PRDM4-205ENST00000550376 FAM231CP0DMU5 169 aa15.28■□□□□ 0.04
PRDM4-205ENST00000550376 MORN3Q6PF18 240 aaPredicted RBP15.28■□□□□ 0.04
PRDM4-205ENST00000550376 TMEM208Q9BTX3 173 aa15.28■□□□□ 0.04
PRDM4-205ENST00000550376 Q9UF83 564 aa15.28■□□□□ 0.04
PRDM4-205ENST00000550376 LGALS9BQ3B8N2 356 aa15.28■□□□□ 0.04
PRDM4-205ENST00000550376 LGALS9CQ6DKI2 356 aa15.28■□□□□ 0.04
PRDM4-205ENST00000550376 ST20Q9HBF5 79 aa15.28■□□□□ 0.04
PRDM4-205ENST00000550376 NACAE9PAV3 2078 aa15.26■□□□□ 0.03
PRDM4-205ENST00000550376 RPL35AP18077 110 aaKnown RBP15.26■□□□□ 0.03
PRDM4-205ENST00000550376 SDHAF1A6NFY7 115 aa15.26■□□□□ 0.03
PRDM4-205ENST00000550376 M0QY20 66 aa15.26■□□□□ 0.03
PRDM4-205ENST00000550376 IGLV1-51P01701 117 aa15.26■□□□□ 0.03
PRDM4-205ENST00000550376 ODF1Q14990 250 aa15.26■□□□□ 0.03
PRDM4-205ENST00000550376 MRPL16Q9NX20 251 aaKnown RBP15.26■□□□□ 0.03
PRDM4-205ENST00000550376 INSP01308 110 aa15.25■□□□□ 0.03
PRDM4-205ENST00000550376 C1orf158Q8N1D5 194 aa15.25■□□□□ 0.03
PRDM4-205ENST00000550376 PF4P02776 101 aa15.25■□□□□ 0.03
PRDM4-205ENST00000550376 NPSP0C0P6 89 aa15.25■□□□□ 0.03
PRDM4-205ENST00000550376 TRPT1Q86TN4 253 aaKnown RBP15.25■□□□□ 0.03
PRDM4-205ENST00000550376 HINT1P49773 126 aaPredicted RBP15.24■□□□□ 0.03
PRDM4-205ENST00000550376 C2orf66Q6UXQ4 117 aa15.24■□□□□ 0.03
PRDM4-205ENST00000550376 SCGB3A1Q96QR1 104 aa15.24■□□□□ 0.03
PRDM4-205ENST00000550376 POLR2KP53803 58 aaKnown RBP15.23■□□□□ 0.03
PRDM4-205ENST00000550376 RPL39P62891 51 aaKnown RBP15.23■□□□□ 0.03
PRDM4-205ENST00000550376 Q6ZSN1 163 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms