RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 TMEM191AQ9H0A3 160 aa4.13□□□□□ -1.75
ABCF1-207ENST00000542772 JPT2Q9H910 190 aa4.13□□□□□ -1.75
ABCF1-207ENST00000542772 RPS10P5Q9NQ39 176 aa4.13□□□□□ -1.75
ABCF1-207ENST00000542772 DYNC2H1Q8NCM8 4307 aaKnown RBP4.12□□□□□ -1.75
ABCF1-207ENST00000542772 TRGV2A0A075B6R0 118 aa4.12□□□□□ -1.75
ABCF1-207ENST00000542772 DEFB131BA0A096LNP1 70 aa4.12□□□□□ -1.75
ABCF1-207ENST00000542772 MUC21A0A0G2JKD1 596 aa4.12□□□□□ -1.75
ABCF1-207ENST00000542772 MUC21A0A140T8X8 626 aa4.12□□□□□ -1.75
ABCF1-207ENST00000542772 TRBV6-4A0A1B0GX49 114 aa4.12□□□□□ -1.75
ABCF1-207ENST00000542772 A0A1B0GXF2 115 aa4.12□□□□□ -1.75
ABCF1-207ENST00000542772 M0R381 172 aa4.12□□□□□ -1.75
ABCF1-207ENST00000542772 IGHV3-53P01767 116 aa4.12□□□□□ -1.75
ABCF1-207ENST00000542772 GATA1P15976 413 aaPredicted RBP4.12□□□□□ -1.75
ABCF1-207ENST00000542772 EVI2AP22794 236 aa4.12□□□□□ -1.75
ABCF1-207ENST00000542772 CRYBA4P53673 196 aa4.12□□□□□ -1.75
ABCF1-207ENST00000542772 RIGQ13278 110 aa4.12□□□□□ -1.75
ABCF1-207ENST00000542772 TWIST1Q15672 202 aa4.12□□□□□ -1.75
ABCF1-207ENST00000542772 RASL11AQ6T310 242 aa4.12□□□□□ -1.75
ABCF1-207ENST00000542772 Q6ZSN1 163 aa4.12□□□□□ -1.75
ABCF1-207ENST00000542772 ATP5L2Q7Z4Y8 100 aa4.12□□□□□ -1.75
ABCF1-207ENST00000542772 OR4C5Q8NGB2 326 aa4.12□□□□□ -1.75
ABCF1-207ENST00000542772 PHLDA1Q8WV24 401 aaPredicted RBP4.12□□□□□ -1.75
ABCF1-207ENST00000542772 BTF3L4Q96K17 158 aa4.12□□□□□ -1.75
ABCF1-207ENST00000542772 YPEL4Q96NS1 127 aa4.12□□□□□ -1.75
ABCF1-207ENST00000542772 PRO0255Q9UI72 69 aa4.12□□□□□ -1.75
ABCF1-207ENST00000542772 HHLA3Q9XRX5 114 aa4.12□□□□□ -1.75
ABCF1-207ENST00000542772 STAB2Q8WWQ8 2551 aa4.12□□□□□ -1.75
ABCF1-207ENST00000542772 TRBV24-1A0A075B6N3 115 aa4.11□□□□□ -1.75
ABCF1-207ENST00000542772 RHODO00212 210 aa4.11□□□□□ -1.75
ABCF1-207ENST00000542772 SCO1O75880 301 aa4.11□□□□□ -1.75
ABCF1-207ENST00000542772 TRGC1P0CF51 173 aa4.11□□□□□ -1.75
ABCF1-207ENST00000542772 RAB4AP20338 218 aa4.11□□□□□ -1.75
ABCF1-207ENST00000542772 TCTAP57738 103 aa4.11□□□□□ -1.75
ABCF1-207ENST00000542772 RAB4BP61018 213 aa4.11□□□□□ -1.75
ABCF1-207ENST00000542772 ELOBQ15370 118 aa4.11□□□□□ -1.75
ABCF1-207ENST00000542772 KCNIP4Q6PIL6 250 aa4.11□□□□□ -1.75
ABCF1-207ENST00000542772 CEMP1Q6PRD7 247 aaPredicted RBP4.11□□□□□ -1.75
ABCF1-207ENST00000542772 C14orf178Q8N769 122 aaPredicted RBP4.11□□□□□ -1.75
ABCF1-207ENST00000542772 MUC7Q8TAX7 377 aa4.11□□□□□ -1.75
ABCF1-207ENST00000542772 BORCS7Q96B45 105 aa4.11□□□□□ -1.75
ABCF1-207ENST00000542772 VSIG2Q96IQ7 327 aa4.11□□□□□ -1.75
ABCF1-207ENST00000542772 TPPP3Q9BW30 176 aa4.11□□□□□ -1.75
ABCF1-207ENST00000542772 DPH3P1Q9H4G8 78 aa4.11□□□□□ -1.75
ABCF1-207ENST00000542772 PLECQ15149 4684 aaKnown RBP4.1□□□□□ -1.75
ABCF1-207ENST00000542772 TRGV4A0A0C4DH28 118 aa4.1□□□□□ -1.75
ABCF1-207ENST00000542772 C3orf84H3BNL1 204 aa4.1□□□□□ -1.75
ABCF1-207ENST00000542772 S100A8P05109 93 aa4.1□□□□□ -1.75
ABCF1-207ENST00000542772 S100PP25815 95 aa4.1□□□□□ -1.75
ABCF1-207ENST00000542772 SSTP61278 116 aa4.1□□□□□ -1.75
ABCF1-207ENST00000542772 COX19Q49B96 90 aa4.1□□□□□ -1.75
ABCF1-207ENST00000542772 FAM104BQ5XKR9 115 aa4.1□□□□□ -1.75
ABCF1-207ENST00000542772 SLC25A29Q8N8R3 303 aa4.1□□□□□ -1.75
ABCF1-207ENST00000542772 RNF185Q96GF1 192 aa4.1□□□□□ -1.75
ABCF1-207ENST00000542772 AP1S3Q96PC3 154 aa4.1□□□□□ -1.75
ABCF1-207ENST00000542772 STARD9Q9P2P6 4700 aa4.09□□□□□ -1.75
ABCF1-207ENST00000542772 A0A087WWL8 130 aa4.09□□□□□ -1.75
ABCF1-207ENST00000542772 TRBV10-1A0A0K0K1A3 114 aa4.09□□□□□ -1.75
ABCF1-207ENST00000542772 LOC105371267A0A1B0GV96 52 aa4.09□□□□□ -1.75
ABCF1-207ENST00000542772 NUPR2A6NF83 97 aa4.09□□□□□ -1.75
ABCF1-207ENST00000542772 PRSS47A8MTI9 375 aa4.09□□□□□ -1.75
ABCF1-207ENST00000542772 F5H768 121 aa4.09□□□□□ -1.75
ABCF1-207ENST00000542772 M0QY20 66 aa4.09□□□□□ -1.75
ABCF1-207ENST00000542772 SMIM17P0DL12 118 aa4.09□□□□□ -1.75
ABCF1-207ENST00000542772 HBBP68871 147 aa4.09□□□□□ -1.75
ABCF1-207ENST00000542772 TMEM136Q6ZRR5 245 aa4.09□□□□□ -1.75
ABCF1-207ENST00000542772 SMIM15Q7Z3B0 74 aa4.09□□□□□ -1.75
ABCF1-207ENST00000542772 DNAJC30Q96LL9 226 aa4.09□□□□□ -1.75
ABCF1-207ENST00000542772 GNB1LQ9BYB4 327 aa4.09□□□□□ -1.75
ABCF1-207ENST00000542772 SMCO4Q9NRQ5 59 aa4.09□□□□□ -1.75
ABCF1-207ENST00000542772 Q9UF83 564 aa4.09□□□□□ -1.75
ABCF1-207ENST00000542772 APLNQ9ULZ1 77 aa4.09□□□□□ -1.75
ABCF1-207ENST00000542772 KLK5Q9Y337 293 aaPredicted RBP4.09□□□□□ -1.75
ABCF1-207ENST00000542772 TRAV26-1A0A087WT03 109 aa4.08□□□□□ -1.76
ABCF1-207ENST00000542772 A0A096LPF7 62 aa4.08□□□□□ -1.76
ABCF1-207ENST00000542772 IGHV3-73A0A0B4J1V6 119 aa4.08□□□□□ -1.76
ABCF1-207ENST00000542772 TRBV6-5A0A0K0K1A5 114 aa4.08□□□□□ -1.76
ABCF1-207ENST00000542772 COLCA2A8K830 154 aa4.08□□□□□ -1.76
ABCF1-207ENST00000542772 K7EQD1 137 aa4.08□□□□□ -1.76
ABCF1-207ENST00000542772 PAX4O43316 350 aa4.08□□□□□ -1.76
ABCF1-207ENST00000542772 LINC00694P0DN24 101 aa4.08□□□□□ -1.76
ABCF1-207ENST00000542772 CAMPP49913 170 aa4.08□□□□□ -1.76
ABCF1-207ENST00000542772 RHOHQ15669 191 aa4.08□□□□□ -1.76
ABCF1-207ENST00000542772 MRPL23Q16540 153 aaKnown RBP4.08□□□□□ -1.76
ABCF1-207ENST00000542772 CASC10Q5T4H9 136 aa4.08□□□□□ -1.76
ABCF1-207ENST00000542772 FAM74A4Q5TZK3 123 aa4.08□□□□□ -1.76
ABCF1-207ENST00000542772 SUMO4Q6EEV6 95 aa4.08□□□□□ -1.76
ABCF1-207ENST00000542772 MRPL54Q6P161 138 aaKnown RBP4.08□□□□□ -1.76
ABCF1-207ENST00000542772 TMEM88Q6PEY1 159 aa4.08□□□□□ -1.76
ABCF1-207ENST00000542772 AMN1Q8IY45 258 aa4.08□□□□□ -1.76
ABCF1-207ENST00000542772 C15orf53Q8NAA6 179 aa4.08□□□□□ -1.76
ABCF1-207ENST00000542772 MRAP2Q96G30 205 aa4.08□□□□□ -1.76
ABCF1-207ENST00000542772 PRADC1Q9BSG0 188 aa4.08□□□□□ -1.76
ABCF1-207ENST00000542772 NIT2Q9NQR4 276 aa4.08□□□□□ -1.76
ABCF1-207ENST00000542772 URGCP-MRPS24S4R325 110 aa4.08□□□□□ -1.76
ABCF1-207ENST00000542772 TRBV7-3A0A075B6L6 115 aa4.07□□□□□ -1.76
ABCF1-207ENST00000542772 TGIF2-C20orf24A0A0A6YYL0 155 aa4.07□□□□□ -1.76
ABCF1-207ENST00000542772 IGLL5B9A064 214 aa4.07□□□□□ -1.76
ABCF1-207ENST00000542772 F5H697 171 aa4.07□□□□□ -1.76
ABCF1-207ENST00000542772 H7C1H1 209 aa4.07□□□□□ -1.76
ABCF1-207ENST00000542772 PPP1R17O96001 155 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms