RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 GCSHP23434 173 aa3.9□□□□□ -1.79
ATPAF1-212ENST00000542495 LINC00315P59091 139 aa3.9□□□□□ -1.79
ATPAF1-212ENST00000542495 RNF151Q2KHN1 245 aa3.9□□□□□ -1.79
ATPAF1-212ENST00000542495 BRD3OSQ6XYD6 125 aa3.9□□□□□ -1.79
ATPAF1-212ENST00000542495 C10orf105Q8TEF2 133 aa3.9□□□□□ -1.79
ATPAF1-212ENST00000542495 RAB37Q96AX2 223 aa3.9□□□□□ -1.79
ATPAF1-212ENST00000542495 NAA38Q9BRA0 125 aaKnown RBP3.9□□□□□ -1.79
ATPAF1-212ENST00000542495 PIMREGQ9BSJ6 248 aa3.9□□□□□ -1.79
ATPAF1-212ENST00000542495 KRTAP4-11Q9BYQ6 195 aa3.9□□□□□ -1.79
ATPAF1-212ENST00000542495 KLK15Q9H2R5 256 aa3.9□□□□□ -1.79
ATPAF1-212ENST00000542495 SPCS1Q9Y6A9 102 aa3.9□□□□□ -1.79
ATPAF1-212ENST00000542495 ITPR2Q14571 2701 aa3.9□□□□□ -1.79
ATPAF1-212ENST00000542495 TRBV7-3A0A075B6L6 115 aa3.89□□□□□ -1.79
ATPAF1-212ENST00000542495 A0A1B0GWB2 263 aa3.89□□□□□ -1.79
ATPAF1-212ENST00000542495 G3V4G9 280 aa3.89□□□□□ -1.79
ATPAF1-212ENST00000542495 SAP30O75446 220 aa3.89□□□□□ -1.79
ATPAF1-212ENST00000542495 PPP1R17O96001 155 aa3.89□□□□□ -1.79
ATPAF1-212ENST00000542495 DEFB1P60022 68 aa3.89□□□□□ -1.79
ATPAF1-212ENST00000542495 SAMD13Q5VXD3 122 aa3.89□□□□□ -1.79
ATPAF1-212ENST00000542495 C14orf178Q8N769 122 aaPredicted RBP3.89□□□□□ -1.79
ATPAF1-212ENST00000542495 RPL39LQ96EH5 51 aaKnown RBP3.89□□□□□ -1.79
ATPAF1-212ENST00000542495 RHPN1-AS1Q9BWJ2 59 aa3.89□□□□□ -1.79
ATPAF1-212ENST00000542495 CHTOPQ9Y3Y2 248 aaKnown RBP3.89□□□□□ -1.79
ATPAF1-212ENST00000542495 PHLDA3Q9Y5J5 127 aa3.89□□□□□ -1.79
ATPAF1-212ENST00000542495 DOPEY1Q5JWR5 2465 aa3.89□□□□□ -1.79
ATPAF1-212ENST00000542495 MED13LQ71F56 2210 aa3.89□□□□□ -1.79
ATPAF1-212ENST00000542495 CELSR2Q9HCU4 2923 aa3.89□□□□□ -1.79
ATPAF1-212ENST00000542495 CRYBG3Q68DQ2 2970 aa3.89□□□□□ -1.79
ATPAF1-212ENST00000542495 F6UB75 175 aa3.89□□□□□ -1.79
ATPAF1-212ENST00000542495 H3BUX3 64 aa3.89□□□□□ -1.79
ATPAF1-212ENST00000542495 K7ERJ3 54 aa3.89□□□□□ -1.79
ATPAF1-212ENST00000542495 GNRH2O43555 120 aa3.89□□□□□ -1.79
ATPAF1-212ENST00000542495 SPRY2O43597 315 aa3.89□□□□□ -1.79
ATPAF1-212ENST00000542495 IGHV3-11P01762 117 aa3.89□□□□□ -1.79
ATPAF1-212ENST00000542495 S100A4P26447 101 aaKnown RBP3.89□□□□□ -1.79
ATPAF1-212ENST00000542495 RNASE4P34096 147 aaKnown RBP3.89□□□□□ -1.79
ATPAF1-212ENST00000542495 BLCAPP62952 87 aa3.89□□□□□ -1.79
ATPAF1-212ENST00000542495 C2orf66Q6UXQ4 117 aa3.89□□□□□ -1.79
ATPAF1-212ENST00000542495 DCANP1Q8TF63 244 aa3.89□□□□□ -1.79
ATPAF1-212ENST00000542495 BAALCQ8WXS3 180 aa3.89□□□□□ -1.79
ATPAF1-212ENST00000542495 SCGB3A1Q96QR1 104 aa3.89□□□□□ -1.79
ATPAF1-212ENST00000542495 VPS25Q9BRG1 176 aa3.89□□□□□ -1.79
ATPAF1-212ENST00000542495 DAZ1Q9NQZ3 744 aaKnown RBP3.89□□□□□ -1.79
ATPAF1-212ENST00000542495 MYMXA0A1B0GTQ4 84 aa3.88□□□□□ -1.79
ATPAF1-212ENST00000542495 LINC01549A6NIU2 74 aa3.88□□□□□ -1.79
ATPAF1-212ENST00000542495 B5MCH6 92 aa3.88□□□□□ -1.79
ATPAF1-212ENST00000542495 IGLL5B9A064 214 aa3.88□□□□□ -1.79
ATPAF1-212ENST00000542495 PLA2G1BP04054 148 aaKnown RBP3.88□□□□□ -1.79
ATPAF1-212ENST00000542495 CRYGDP07320 174 aa3.88□□□□□ -1.79
ATPAF1-212ENST00000542495 POLR2KP53803 58 aaKnown RBP3.88□□□□□ -1.79
ATPAF1-212ENST00000542495 LY6EQ16553 131 aa3.88□□□□□ -1.79
ATPAF1-212ENST00000542495 C12orf74Q32Q52 190 aa3.88□□□□□ -1.79
ATPAF1-212ENST00000542495 LCNL1Q6ZST4 164 aa3.88□□□□□ -1.79
ATPAF1-212ENST00000542495 ODF3Q96PU9 254 aa3.88□□□□□ -1.79
ATPAF1-212ENST00000542495 CSTL1Q9H114 145 aa3.88□□□□□ -1.79
ATPAF1-212ENST00000542495 NHP2Q9NX24 153 aaKnown RBP3.88□□□□□ -1.79
ATPAF1-212ENST00000542495 CENPEQ02224 2701 aa3.87□□□□□ -1.79
ATPAF1-212ENST00000542495 IGHV4-30-2A0A087WSY4 118 aa3.87□□□□□ -1.79
ATPAF1-212ENST00000542495 TRBV6-5A0A0K0K1A5 114 aa3.87□□□□□ -1.79
ATPAF1-212ENST00000542495 TMEM89A2RUT3 159 aa3.87□□□□□ -1.79
ATPAF1-212ENST00000542495 IGIPA6NJ69 53 aa3.87□□□□□ -1.79
ATPAF1-212ENST00000542495 OR11H12B2RN74 326 aa3.87□□□□□ -1.79
ATPAF1-212ENST00000542495 TSHBP01222 138 aa3.87□□□□□ -1.79
ATPAF1-212ENST00000542495 MSMBP08118 114 aa3.87□□□□□ -1.79
ATPAF1-212ENST00000542495 MGPP08493 103 aa3.87□□□□□ -1.79
ATPAF1-212ENST00000542495 LGALS1P09382 135 aaKnown RBP3.87□□□□□ -1.79
ATPAF1-212ENST00000542495 COX6B1P14854 86 aa3.87□□□□□ -1.79
ATPAF1-212ENST00000542495 PSMB8P28062 276 aa3.87□□□□□ -1.79
ATPAF1-212ENST00000542495 FOXI2Q6ZQN5 318 aa3.87□□□□□ -1.79
ATPAF1-212ENST00000542495 OR11H1Q8NG94 326 aa3.87□□□□□ -1.79
ATPAF1-212ENST00000542495 OR11H2Q8NH07 326 aa3.87□□□□□ -1.79
ATPAF1-212ENST00000542495 CCL19Q99731 98 aa3.87□□□□□ -1.79
ATPAF1-212ENST00000542495 SPATA25Q9BR10 227 aa3.87□□□□□ -1.79
ATPAF1-212ENST00000542495 MUC4Q99102 2169 aa3.87□□□□□ -1.79
ATPAF1-212ENST00000542495 IGLV4-69A0A075B6H9 119 aa3.86□□□□□ -1.79
ATPAF1-212ENST00000542495 LGALS9O00182 355 aa3.86□□□□□ -1.79
ATPAF1-212ENST00000542495 HOXA3O43365 443 aaPredicted RBP3.86□□□□□ -1.79
ATPAF1-212ENST00000542495 EDN2P20800 178 aa3.86□□□□□ -1.79
ATPAF1-212ENST00000542495 ID1P41134 155 aa3.86□□□□□ -1.79
ATPAF1-212ENST00000542495 RIPPLY3P57055 190 aa3.86□□□□□ -1.79
ATPAF1-212ENST00000542495 FHL3Q13643 280 aa3.86□□□□□ -1.79
ATPAF1-212ENST00000542495 COTL1Q14019 142 aa3.86□□□□□ -1.79
ATPAF1-212ENST00000542495 RRN3P1Q2M238 152 aa3.86□□□□□ -1.79
ATPAF1-212ENST00000542495 SUMO4Q6EEV6 95 aa3.86□□□□□ -1.79
ATPAF1-212ENST00000542495 CLEC2AQ6UVW9 174 aa3.86□□□□□ -1.79
ATPAF1-212ENST00000542495 ZFP2Q6ZN57 461 aa3.86□□□□□ -1.79
ATPAF1-212ENST00000542495 C9orf85Q96MD7 179 aa3.86□□□□□ -1.79
ATPAF1-212ENST00000542495 HIST1H4GQ99525 98 aa3.86□□□□□ -1.79
ATPAF1-212ENST00000542495 PRADC1Q9BSG0 188 aa3.86□□□□□ -1.79
ATPAF1-212ENST00000542495 KRTAP4-5Q9BYR2 181 aa3.86□□□□□ -1.79
ATPAF1-212ENST00000542495 CYSLTR1Q9Y271 337 aa3.86□□□□□ -1.79
ATPAF1-212ENST00000542495 IGHV3-16A0A0C4DH30 117 aa3.86□□□□□ -1.79
ATPAF1-212ENST00000542495 TRBV27A0A0K0K1C4 114 aa3.86□□□□□ -1.79
ATPAF1-212ENST00000542495 F8W1H4 67 aa3.86□□□□□ -1.79
ATPAF1-212ENST00000542495 VCYO14598 125 aa3.86□□□□□ -1.79
ATPAF1-212ENST00000542495 DUSP14O95147 198 aaKnown RBP3.86□□□□□ -1.79
ATPAF1-212ENST00000542495 GATA3P23771 443 aa3.86□□□□□ -1.79
ATPAF1-212ENST00000542495 PAPPA-AS1Q5QFB9 102 aa3.86□□□□□ -1.79
ATPAF1-212ENST00000542495 FAM159AQ6UWV7 190 aa3.86□□□□□ -1.79
ATPAF1-212ENST00000542495 TMEM141Q96I45 108 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms