RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 TMEM78Q5T7P6 136 aa0.86□□□□□ -2.27
TRAV1-1-201ENST00000542354 PRR9Q5T870 116 aa0.86□□□□□ -2.27
TRAV1-1-201ENST00000542354 LPCAT3Q6P1A2 487 aa0.86□□□□□ -2.27
TRAV1-1-201ENST00000542354 LINC01551Q86U37 167 aa0.86□□□□□ -2.27
TRAV1-1-201ENST00000542354 ARL17AQ8IVW1 177 aa0.86□□□□□ -2.27
TRAV1-1-201ENST00000542354 HS3ST5Q8IZT8 346 aa0.86□□□□□ -2.27
TRAV1-1-201ENST00000542354 BEST4Q8NFU0 473 aa0.86□□□□□ -2.27
TRAV1-1-201ENST00000542354 MITD1Q8WV92 249 aa0.86□□□□□ -2.27
TRAV1-1-201ENST00000542354 MAFIPQ8WZ33 124 aa0.86□□□□□ -2.27
TRAV1-1-201ENST00000542354 PHYHIPQ92561 330 aa0.86□□□□□ -2.27
TRAV1-1-201ENST00000542354 BORCS5Q969J3 196 aa0.86□□□□□ -2.27
TRAV1-1-201ENST00000542354 TRGV9Q99603 122 aa0.86□□□□□ -2.27
TRAV1-1-201ENST00000542354 MGLLQ99685 303 aa0.86□□□□□ -2.27
TRAV1-1-201ENST00000542354 LCE3DQ9BYE3 92 aa0.86□□□□□ -2.27
TRAV1-1-201ENST00000542354 OCR1Q9BZK8 76 aa0.86□□□□□ -2.27
TRAV1-1-201ENST00000542354 SLC5A7Q9GZV3 580 aa0.86□□□□□ -2.27
TRAV1-1-201ENST00000542354 RRP15Q9Y3B9 282 aaKnown RBP0.86□□□□□ -2.27
TRAV1-1-201ENST00000542354 C22orf24Q9Y442 160 aa0.86□□□□□ -2.27
TRAV1-1-201ENST00000542354 IGKV1D-37A0A075B6S9 117 aa0.85□□□□□ -2.27
TRAV1-1-201ENST00000542354 A0A0A6YYD4 124 aa0.85□□□□□ -2.27
TRAV1-1-201ENST00000542354 IGHV1-24A0A0C4DH33 117 aa0.85□□□□□ -2.27
TRAV1-1-201ENST00000542354 TRBV7-9A0A0J9YWB2 115 aa0.85□□□□□ -2.27
TRAV1-1-201ENST00000542354 DAPL1A0PJW8 107 aa0.85□□□□□ -2.27
TRAV1-1-201ENST00000542354 PGPEP1LA6NFU8 196 aa0.85□□□□□ -2.27
TRAV1-1-201ENST00000542354 H3BRN7 92 aa0.85□□□□□ -2.27
TRAV1-1-201ENST00000542354 ERC2-IT1O76042 136 aa0.85□□□□□ -2.27
TRAV1-1-201ENST00000542354 CDS2O95674 445 aa0.85□□□□□ -2.27
TRAV1-1-201ENST00000542354 TCRAP04437 139 aa0.85□□□□□ -2.27
TRAV1-1-201ENST00000542354 TLX1NBP0CAT3 122 aa0.85□□□□□ -2.27
TRAV1-1-201ENST00000542354 HIST1H1EP10412 219 aaKnown RBP0.85□□□□□ -2.27
TRAV1-1-201ENST00000542354 DTYMKP23919 212 aa0.85□□□□□ -2.27
TRAV1-1-201ENST00000542354 TMEM241Q24JQ0 296 aa0.85□□□□□ -2.27
TRAV1-1-201ENST00000542354 TRIM16LQ309B1 348 aa0.85□□□□□ -2.27
TRAV1-1-201ENST00000542354 LGALSLQ3ZCW2 172 aaPredicted RBP0.85□□□□□ -2.27
TRAV1-1-201ENST00000542354 TMEM236Q5W0B7 351 aa0.85□□□□□ -2.27
TRAV1-1-201ENST00000542354 EPGNQ6UW88 154 aa0.85□□□□□ -2.27
TRAV1-1-201ENST00000542354 TMPRSS11AQ6ZMR5 421 aa0.85□□□□□ -2.27
TRAV1-1-201ENST00000542354 NTM-AS1Q6ZSK4 140 aa0.85□□□□□ -2.27
TRAV1-1-201ENST00000542354 NKAIN3Q8N8D7 197 aa0.85□□□□□ -2.27
TRAV1-1-201ENST00000542354 C4orf36Q96KX1 117 aa0.85□□□□□ -2.27
TRAV1-1-201ENST00000542354 GFI1Q99684 422 aa0.85□□□□□ -2.27
TRAV1-1-201ENST00000542354 SLC29A1Q99808 456 aa0.85□□□□□ -2.27
TRAV1-1-201ENST00000542354 LIMD2Q9BT23 127 aa0.85□□□□□ -2.27
TRAV1-1-201ENST00000542354 DERL1Q9BUN8 251 aa0.85□□□□□ -2.27
TRAV1-1-201ENST00000542354 SPRR2GQ9BYE4 73 aa0.85□□□□□ -2.27
TRAV1-1-201ENST00000542354 NAA60Q9H7X0 242 aa0.85□□□□□ -2.27
TRAV1-1-201ENST00000542354 FKBP14Q9NWM8 211 aa0.85□□□□□ -2.27
TRAV1-1-201ENST00000542354 CMTM6Q9NX76 183 aa0.85□□□□□ -2.27
TRAV1-1-201ENST00000542354 POMPQ9Y244 141 aa0.85□□□□□ -2.27
TRAV1-1-201ENST00000542354 ZNF706Q9Y5V0 76 aaPredicted RBP0.85□□□□□ -2.27
TRAV1-1-201ENST00000542354 SAR1BQ9Y6B6 198 aa0.85□□□□□ -2.27
TRAV1-1-201ENST00000542354 TRAV8-7A0A075B6U6 113 aa0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 IGKV1D-8A0A087WSZ0 117 aa0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 A0A0B4J2A0 478 aa0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 RPL37AP8A6NKH3 93 aa0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 HYPMO75409 117 aa0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 PGLYRP1O75594 196 aaPredicted RBP0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 TYMSP04818 313 aa0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 ARL14EPLP0DKL9 152 aa0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 NTF3P20783 257 aa0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 GPX4P36969 197 aaPredicted RBP0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 XCL1P47992 114 aa0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 IQCJQ1A5X6 159 aa0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 Q6AWC8 147 aa0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 UFSP1Q6NVU6 142 aa0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 CNIH2Q6PI25 160 aa0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 ACOT7LQ6ZUV0 252 aa0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 KRTAP19-3Q7Z4W3 81 aa0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 FAM19A3Q7Z5A8 133 aa0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 MRPL55Q7Z7F7 128 aaKnown RBP0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 CBLN2Q8IUK8 224 aa0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 OR56B1Q8NGI3 324 aa0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 OR1S1Q8NH92 325 aa0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 ASB13Q8WXK3 278 aa0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 PACRGQ96M98 296 aaPredicted RBP0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 SPRR4Q96PI1 79 aa0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 FEVQ99581 238 aa0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 SLC25A21Q9BQT8 299 aaPredicted RBP0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 MARVELD1Q9BSK0 173 aa0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 EIF5A2Q9GZV4 153 aaKnown RBP0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 SMDT1Q9H4I9 107 aa0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 AUNIPQ9H7T9 357 aa0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 ARGLU1Q9NWB6 273 aaPredicted RBP0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 MRPL35Q9NZE8 188 aaKnown RBP0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 MBD2Q9UBB5 411 aa0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 ANXA10Q9UJ72 324 aa0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 HIGD1AQ9Y241 93 aa0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 PRELID1Q9Y255 219 aa0.84□□□□□ -2.27
TRAV1-1-201ENST00000542354 IGKV2-40A0A087WW87 121 aaPredicted RBP0.83□□□□□ -2.28
TRAV1-1-201ENST00000542354 TRBV6-1A0A0K0K1D8 114 aa0.83□□□□□ -2.28
TRAV1-1-201ENST00000542354 F8WDY8 70 aa0.83□□□□□ -2.28
TRAV1-1-201ENST00000542354 H3BTX0 84 aa0.83□□□□□ -2.28
TRAV1-1-201ENST00000542354 M0R036 132 aa0.83□□□□□ -2.28
TRAV1-1-201ENST00000542354 FXYD1O00168 92 aa0.83□□□□□ -2.28
TRAV1-1-201ENST00000542354 UBE2L6O14933 153 aa0.83□□□□□ -2.28
TRAV1-1-201ENST00000542354 FAM107AO95990 144 aa0.83□□□□□ -2.28
TRAV1-1-201ENST00000542354 PPYP01298 95 aa0.83□□□□□ -2.28
TRAV1-1-201ENST00000542354 IGKV2D-40P01614 121 aaPredicted RBP0.83□□□□□ -2.28
TRAV1-1-201ENST00000542354 RLN1P04808 185 aa0.83□□□□□ -2.28
TRAV1-1-201ENST00000542354 OR5G3P0C626 314 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms