RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 SMIM17P0DL12 118 aa11.49□□□□□ -0.57
CLPTM1-202ENST00000541297 HIGD1BQ9P298 99 aa11.49□□□□□ -0.57
CLPTM1-202ENST00000541297 AGRNO00468 2067 aa11.49□□□□□ -0.57
CLPTM1-202ENST00000541297 FN1P02751 2386 aaKnown RBP11.49□□□□□ -0.57
CLPTM1-202ENST00000541297 TRBV25-1A0A075B6N4 114 aa11.49□□□□□ -0.57
CLPTM1-202ENST00000541297 DEFB1P60022 68 aa11.49□□□□□ -0.57
CLPTM1-202ENST00000541297 CD28P10747 220 aa11.48□□□□□ -0.57
CLPTM1-202ENST00000541297 PHLDA1Q8WV24 401 aaPredicted RBP11.48□□□□□ -0.57
CLPTM1-202ENST00000541297 C4orf3Q8WVX3 66 aa11.48□□□□□ -0.57
CLPTM1-202ENST00000541297 NHP2Q9NX24 153 aaKnown RBP11.48□□□□□ -0.57
CLPTM1-202ENST00000541297 LINC01546A6NGU7 62 aa11.48□□□□□ -0.57
CLPTM1-202ENST00000541297 SAMD13Q5VXD3 122 aa11.48□□□□□ -0.57
CLPTM1-202ENST00000541297 NIPBLQ6KC79 2804 aaeCLIP11.47□□□□□ -0.57
CLPTM1-202ENST00000541297 ZC2HC1BQ5TFG8 222 aa11.47□□□□□ -0.57
CLPTM1-202ENST00000541297 TMEM158Q8WZ71 300 aa11.47□□□□□ -0.57
CLPTM1-202ENST00000541297 LINC01619G3V211 115 aa11.47□□□□□ -0.57
CLPTM1-202ENST00000541297 SOCS3O14543 225 aa11.47□□□□□ -0.57
CLPTM1-202ENST00000541297 NXT2Q9NPJ8 142 aaKnown RBP11.47□□□□□ -0.57
CLPTM1-202ENST00000541297 CEND1Q8N111 149 aa11.46□□□□□ -0.58
CLPTM1-202ENST00000541297 CNFNQ9BYD5 112 aa11.46□□□□□ -0.58
CLPTM1-202ENST00000541297 LGALS9O00182 355 aa11.45□□□□□ -0.58
CLPTM1-202ENST00000541297 CITED2Q99967 270 aaPredicted RBP11.45□□□□□ -0.58
CLPTM1-202ENST00000541297 AGPAT4-IT1Q9H0P7 198 aa11.45□□□□□ -0.58
CLPTM1-202ENST00000541297 SORL1Q92673 2214 aa11.45□□□□□ -0.58
CLPTM1-202ENST00000541297 BAHCC1Q9P281 2608 aa11.45□□□□□ -0.58
CLPTM1-202ENST00000541297 FABP5P3A8MUU1 101 aa11.45□□□□□ -0.58
CLPTM1-202ENST00000541297 DPM2O94777 84 aa11.45□□□□□ -0.58
CLPTM1-202ENST00000541297 TM2D2Q9BX73 214 aa11.45□□□□□ -0.58
CLPTM1-202ENST00000541297 C16orf95Q9H693 158 aa11.45□□□□□ -0.58
CLPTM1-202ENST00000541297 F6UB75 175 aa11.44□□□□□ -0.58
CLPTM1-202ENST00000541297 PSMG4Q5JS54 123 aa11.44□□□□□ -0.58
CLPTM1-202ENST00000541297 MAPKAPK5-AS1Q8N8E1 139 aa11.44□□□□□ -0.58
CLPTM1-202ENST00000541297 DLX4Q92988 240 aaPredicted RBP11.44□□□□□ -0.58
CLPTM1-202ENST00000541297 GTSF1LQ9H1H1 148 aa11.44□□□□□ -0.58
CLPTM1-202ENST00000541297 SMAGPQ0VAQ4 97 aa11.44□□□□□ -0.58
CLPTM1-202ENST00000541297 TMEM78Q5T7P6 136 aa11.44□□□□□ -0.58
CLPTM1-202ENST00000541297 MRPL53Q96EL3 112 aaKnown RBP11.44□□□□□ -0.58
CLPTM1-202ENST00000541297 MRPL35Q9NZE8 188 aaKnown RBP11.44□□□□□ -0.58
CLPTM1-202ENST00000541297 RBAKDNA6NC62 111 aa11.43□□□□□ -0.58
CLPTM1-202ENST00000541297 WFDC2Q14508 124 aa11.43□□□□□ -0.58
CLPTM1-202ENST00000541297 Q8N8P6 123 aa11.43□□□□□ -0.58
CLPTM1-202ENST00000541297 DCANP1Q8TF63 244 aa11.43□□□□□ -0.58
CLPTM1-202ENST00000541297 F8P00451 2351 aa11.43□□□□□ -0.58
CLPTM1-202ENST00000541297 IGLV2-18A0A075B6J9 118 aa11.43□□□□□ -0.58
CLPTM1-202ENST00000541297 IGLL5B9A064 214 aa11.43□□□□□ -0.58
CLPTM1-202ENST00000541297 E9PLD3 99 aa11.43□□□□□ -0.58
CLPTM1-202ENST00000541297 ATP5LO75964 103 aa11.43□□□□□ -0.58
CLPTM1-202ENST00000541297 AZU1P20160 251 aa11.43□□□□□ -0.58
CLPTM1-202ENST00000541297 RAX2Q96IS3 184 aa11.43□□□□□ -0.58
CLPTM1-202ENST00000541297 FOXI2Q6ZQN5 318 aa11.42□□□□□ -0.58
CLPTM1-202ENST00000541297 C2CD3Q4AC94 2353 aa11.42□□□□□ -0.58
CLPTM1-202ENST00000541297 J3KRW8 73 aa11.41□□□□□ -0.58
CLPTM1-202ENST00000541297 LINC01559Q495D7 138 aa11.41□□□□□ -0.58
CLPTM1-202ENST00000541297 TRAV26-2A0A0B4J265 109 aa11.41□□□□□ -0.58
CLPTM1-202ENST00000541297 ZNF688P0C7X2 276 aa11.41□□□□□ -0.58
CLPTM1-202ENST00000541297 C9orf47Q6ZRZ4 202 aa11.41□□□□□ -0.58
CLPTM1-202ENST00000541297 IGKV3D-20A0A0C4DH25 116 aa11.4□□□□□ -0.58
CLPTM1-202ENST00000541297 H3BMG7 143 aa11.4□□□□□ -0.58
CLPTM1-202ENST00000541297 ZNF479Q96JC4 524 aa11.4□□□□□ -0.58
CLPTM1-202ENST00000541297 SIGMAR1Q99720 223 aa11.4□□□□□ -0.58
CLPTM1-202ENST00000541297 SPANXB1Q9NS25 103 aaPredicted RBP11.4□□□□□ -0.58
CLPTM1-202ENST00000541297 C11orf21Q9P2W6 132 aa11.4□□□□□ -0.58
CLPTM1-202ENST00000541297 TSSC4Q9Y5U2 329 aaPredicted RBP11.4□□□□□ -0.58
CLPTM1-202ENST00000541297 C12orf74Q32Q52 190 aa11.4□□□□□ -0.58
CLPTM1-202ENST00000541297 CFAP161Q6P656 301 aa11.4□□□□□ -0.58
CLPTM1-202ENST00000541297 OR10J6PQ8NGY7 276 aa11.4□□□□□ -0.58
CLPTM1-202ENST00000541297 AMTNQ6UX39 209 aa11.39□□□□□ -0.59
CLPTM1-202ENST00000541297 SH2D6Q7Z4S9 175 aa11.39□□□□□ -0.59
CLPTM1-202ENST00000541297 PEMTQ9UBM1 199 aa11.39□□□□□ -0.59
CLPTM1-202ENST00000541297 F8W1H4 67 aa11.39□□□□□ -0.59
CLPTM1-202ENST00000541297 CCL24O00175 119 aa11.39□□□□□ -0.59
CLPTM1-202ENST00000541297 ID1P41134 155 aa11.39□□□□□ -0.59
CLPTM1-202ENST00000541297 LAGE3Q14657 143 aa11.39□□□□□ -0.59
CLPTM1-202ENST00000541297 Q6ZQT7 251 aa11.39□□□□□ -0.59
CLPTM1-202ENST00000541297 OVOL1O14753 267 aa11.38□□□□□ -0.59
CLPTM1-202ENST00000541297 NDUFA7O95182 113 aa11.38□□□□□ -0.59
CLPTM1-202ENST00000541297 HLA-DRB4P13762 266 aa11.38□□□□□ -0.59
CLPTM1-202ENST00000541297 PROK1P58294 105 aa11.38□□□□□ -0.59
CLPTM1-202ENST00000541297 NRACQ8N912 160 aa11.38□□□□□ -0.59
CLPTM1-202ENST00000541297 HLA-DRB4X5D2U9 266 aa11.38□□□□□ -0.59
CLPTM1-202ENST00000541297 TRAV26-1A0A087WT03 109 aa11.38□□□□□ -0.59
CLPTM1-202ENST00000541297 GAGE12HA6NDE8 117 aa11.38□□□□□ -0.59
CLPTM1-202ENST00000541297 ETDBQ3ZM63 59 aa11.38□□□□□ -0.59
CLPTM1-202ENST00000541297 CD300EQ496F6 205 aaPredicted RBP11.38□□□□□ -0.59
CLPTM1-202ENST00000541297 MTURNQ8N3F0 131 aa11.38□□□□□ -0.59
CLPTM1-202ENST00000541297 HIST1H4GQ99525 98 aa11.38□□□□□ -0.59
CLPTM1-202ENST00000541297 A0A087WX48 190 aa11.37□□□□□ -0.59
CLPTM1-202ENST00000541297 NSUN5P1Q3KNT7 163 aa11.37□□□□□ -0.59
CLPTM1-202ENST00000541297 K7EQG2 157 aa11.37□□□□□ -0.59
CLPTM1-202ENST00000541297 CRLF1O75462 422 aa11.37□□□□□ -0.59
CLPTM1-202ENST00000541297 PRR9Q5T870 116 aa11.37□□□□□ -0.59
CLPTM1-202ENST00000541297 JMJD1CQ15652 2540 aa11.37□□□□□ -0.59
CLPTM1-202ENST00000541297 SPAG8Q99932 426 aaPredicted RBP11.37□□□□□ -0.59
CLPTM1-202ENST00000541297 SNRPD3P62318 126 aaKnown RBP11.36□□□□□ -0.59
CLPTM1-202ENST00000541297 FHL3Q13643 280 aa11.36□□□□□ -0.59
CLPTM1-202ENST00000541297 TAL2Q16559 108 aa11.36□□□□□ -0.59
CLPTM1-202ENST00000541297 DYNLRB2Q8TF09 96 aa11.36□□□□□ -0.59
CLPTM1-202ENST00000541297 LINC00477Q96M19 166 aa11.36□□□□□ -0.59
CLPTM1-202ENST00000541297 TENM1Q9UKZ4 2725 aa11.36□□□□□ -0.59
CLPTM1-202ENST00000541297 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 159.9 ms