RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 MSRB1Q9NZV6 116 aa9.83□□□□□ -0.84
LTBR-209ENST00000541102 HHLA3Q9XRX5 114 aa9.83□□□□□ -0.84
LTBR-209ENST00000541102 PHLDA3Q9Y5J5 127 aa9.83□□□□□ -0.84
LTBR-209ENST00000541102 TRGV4A0A0C4DH28 118 aa9.82□□□□□ -0.84
LTBR-209ENST00000541102 GATCO43716 136 aaKnown RBP9.82□□□□□ -0.84
LTBR-209ENST00000541102 NXPH4O95158 308 aa9.82□□□□□ -0.84
LTBR-209ENST00000541102 OR5AL1P0C617 328 aa9.82□□□□□ -0.84
LTBR-209ENST00000541102 UFSP1Q6NVU6 142 aa9.82□□□□□ -0.84
LTBR-209ENST00000541102 LYZL1Q6UWQ5 148 aa9.82□□□□□ -0.84
LTBR-209ENST00000541102 FER1L6-AS1Q8NA97 138 aa9.82□□□□□ -0.84
LTBR-209ENST00000541102 PRO0255Q9UI72 69 aa9.82□□□□□ -0.84
LTBR-209ENST00000541102 V9GYV3 84 aa9.82□□□□□ -0.84
LTBR-209ENST00000541102 A0A087WWL8 130 aa9.81□□□□□ -0.84
LTBR-209ENST00000541102 CRYBA4P53673 196 aa9.81□□□□□ -0.84
LTBR-209ENST00000541102 RPS20P60866 119 aaKnown RBP9.81□□□□□ -0.84
LTBR-209ENST00000541102 SLAQ13239 276 aa9.81□□□□□ -0.84
LTBR-209ENST00000541102 OSTCQ9NRP0 149 aa9.81□□□□□ -0.84
LTBR-209ENST00000541102 MRPS16Q9Y3D3 137 aaKnown RBP9.81□□□□□ -0.84
LTBR-209ENST00000541102 ICOSQ9Y6W8 199 aa9.81□□□□□ -0.84
LTBR-209ENST00000541102 HECTD4Q9Y4D8 3996 aa9.81□□□□□ -0.84
LTBR-209ENST00000541102 FAT2Q9NYQ8 4349 aa9.81□□□□□ -0.84
LTBR-209ENST00000541102 LOC100131303A0A0U1RQF7 123 aa9.8□□□□□ -0.84
LTBR-209ENST00000541102 TMEM218A2RU14 115 aa9.8□□□□□ -0.84
LTBR-209ENST00000541102 CRYGDP07320 174 aa9.8□□□□□ -0.84
LTBR-209ENST00000541102 UQCC3Q6UW78 93 aa9.8□□□□□ -0.84
LTBR-209ENST00000541102 ZFP82Q8N141 532 aa9.8□□□□□ -0.84
LTBR-209ENST00000541102 C6orf223Q8N319 242 aa9.8□□□□□ -0.84
LTBR-209ENST00000541102 SFRP2Q96HF1 295 aa9.8□□□□□ -0.84
LTBR-209ENST00000541102 Q9UF83 564 aa9.8□□□□□ -0.84
LTBR-209ENST00000541102 GATA1P15976 413 aaPredicted RBP9.79□□□□□ -0.84
LTBR-209ENST00000541102 CTRLP40313 264 aa9.79□□□□□ -0.84
LTBR-209ENST00000541102 PIK3CD-AS1Q5SR53 167 aa9.79□□□□□ -0.84
LTBR-209ENST00000541102 SYT8Q8NBV8 401 aa9.79□□□□□ -0.84
LTBR-209ENST00000541102 UPK3BQ9BT76 320 aa9.79□□□□□ -0.84
LTBR-209ENST00000541102 XKRY2A2RUG3 117 aa9.78□□□□□ -0.84
LTBR-209ENST00000541102 A8MWV9 139 aa9.78□□□□□ -0.84
LTBR-209ENST00000541102 MRPL23Q16540 153 aaKnown RBP9.78□□□□□ -0.84
LTBR-209ENST00000541102 FAM74A4Q5TZK3 123 aa9.78□□□□□ -0.84
LTBR-209ENST00000541102 SPANXN1Q5VSR9 72 aa9.78□□□□□ -0.84
LTBR-209ENST00000541102 OR10G8Q8NGN5 311 aa9.78□□□□□ -0.84
LTBR-209ENST00000541102 PGLYRP4Q96LB8 373 aa9.78□□□□□ -0.84
LTBR-209ENST00000541102 A8MWL6 223 aa9.77□□□□□ -0.85
LTBR-209ENST00000541102 NTF3P20783 257 aa9.77□□□□□ -0.85
LTBR-209ENST00000541102 TNP2Q05952 138 aa9.77□□□□□ -0.85
LTBR-209ENST00000541102 CT83Q5H943 113 aa9.77□□□□□ -0.85
LTBR-209ENST00000541102 TTC32Q5I0X7 151 aa9.77□□□□□ -0.85
LTBR-209ENST00000541102 C14orf178Q8N769 122 aaPredicted RBP9.77□□□□□ -0.85
LTBR-209ENST00000541102 SLC25A29Q8N8R3 303 aa9.77□□□□□ -0.85
LTBR-209ENST00000541102 TSKUQ8WUA8 353 aa9.77□□□□□ -0.85
LTBR-209ENST00000541102 KRTAP1-5Q9BYS1 174 aa9.77□□□□□ -0.85
LTBR-209ENST00000541102 KIF25-AS1Q9Y6Z4 181 aa9.77□□□□□ -0.85
LTBR-209ENST00000541102 A0A1W2PPQ1 181 aa9.76□□□□□ -0.85
LTBR-209ENST00000541102 GYPEP15421 78 aa9.76□□□□□ -0.85
LTBR-209ENST00000541102 FOXA3P55318 350 aaPredicted RBP9.76□□□□□ -0.85
LTBR-209ENST00000541102 LINC00315P59091 139 aa9.76□□□□□ -0.85
LTBR-209ENST00000541102 LYPD5Q6UWN5 251 aa9.76□□□□□ -0.85
LTBR-209ENST00000541102 C15orf54Q8N8G6 183 aa9.76□□□□□ -0.85
LTBR-209ENST00000541102 HIGD1CA8MV81 97 aa9.75□□□□□ -0.85
LTBR-209ENST00000541102 F2Z2F3 143 aa9.75□□□□□ -0.85
LTBR-209ENST00000541102 F8W036 122 aa9.75□□□□□ -0.85
LTBR-209ENST00000541102 SIVA1O15304 175 aa9.75□□□□□ -0.85
LTBR-209ENST00000541102 EVI2AP22794 236 aa9.75□□□□□ -0.85
LTBR-209ENST00000541102 SRIP30626 198 aa9.75□□□□□ -0.85
LTBR-209ENST00000541102 ZFP2Q6ZN57 461 aa9.75□□□□□ -0.85
LTBR-209ENST00000541102 NEGR1Q7Z3B1 354 aa9.75□□□□□ -0.85
LTBR-209ENST00000541102 CNFNQ9BYD5 112 aa9.75□□□□□ -0.85
LTBR-209ENST00000541102 K7EQD1 137 aa9.74□□□□□ -0.85
LTBR-209ENST00000541102 CACNG7P62955 275 aa9.74□□□□□ -0.85
LTBR-209ENST00000541102 SMIM27A0A1W2PRY6 76 aa9.73□□□□□ -0.85
LTBR-209ENST00000541102 TWIST1Q15672 202 aa9.73□□□□□ -0.85
LTBR-209ENST00000541102 C10orf91Q5T1B1 145 aa9.73□□□□□ -0.85
LTBR-209ENST00000541102 WDR73Q6P4I2 378 aa9.73□□□□□ -0.85
LTBR-209ENST00000541102 SLC7A5P1Q8MH63 180 aa9.73□□□□□ -0.85
LTBR-209ENST00000541102 NUP35Q8NFH5 326 aa9.73□□□□□ -0.85
LTBR-209ENST00000541102 SEC11CQ9BY50 192 aa9.73□□□□□ -0.85
LTBR-209ENST00000541102 GFRA4Q9GZZ7 299 aa9.73□□□□□ -0.85
LTBR-209ENST00000541102 TRBV6-4A0A1B0GX49 114 aa9.72□□□□□ -0.85
LTBR-209ENST00000541102 PKD1P98161 4303 aa9.72□□□□□ -0.85
LTBR-209ENST00000541102 RHODO00212 210 aa9.71□□□□□ -0.86
LTBR-209ENST00000541102 CIDEAO60543 219 aa9.71□□□□□ -0.86
LTBR-209ENST00000541102 MGPP08493 103 aa9.71□□□□□ -0.86
LTBR-209ENST00000541102 PNRC1Q12796 327 aaPredicted RBP9.71□□□□□ -0.86
LTBR-209ENST00000541102 ZNF56Q15929 161 aa9.71□□□□□ -0.86
LTBR-209ENST00000541102 AP1S3Q96PC3 154 aa9.71□□□□□ -0.86
LTBR-209ENST00000541102 DNAH11Q96DT5 4516 aa9.71□□□□□ -0.86
LTBR-209ENST00000541102 A0A1B0GUT8 65 aa9.7□□□□□ -0.86
LTBR-209ENST00000541102 FAM231BA6NCW3 169 aa9.7□□□□□ -0.86
LTBR-209ENST00000541102 GAGE12JA6NER3 117 aa9.7□□□□□ -0.86
LTBR-209ENST00000541102 LINC00694P0DN24 101 aa9.7□□□□□ -0.86
LTBR-209ENST00000541102 GAGE1Q13065 139 aa9.7□□□□□ -0.86
LTBR-209ENST00000541102 GAGE4Q13068 117 aa9.7□□□□□ -0.86
LTBR-209ENST00000541102 GAGE5Q13069 117 aa9.7□□□□□ -0.86
LTBR-209ENST00000541102 RHOHQ15669 191 aa9.7□□□□□ -0.86
LTBR-209ENST00000541102 GAGE13Q4V321 117 aa9.7□□□□□ -0.86
LTBR-209ENST00000541102 CARHSP1Q9Y2V2 147 aaKnown RBP9.7□□□□□ -0.86
LTBR-209ENST00000541102 PKHD1P08F94 4074 aa9.69□□□□□ -0.86
LTBR-209ENST00000541102 DYNC1H1Q14204 4646 aaKnown RBP9.69□□□□□ -0.86
LTBR-209ENST00000541102 HERC2O95714 4834 aa9.69□□□□□ -0.86
LTBR-209ENST00000541102 F5H697 171 aa9.69□□□□□ -0.86
LTBR-209ENST00000541102 RAB4BP61018 213 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms