RNA–Protein interactions for RNA: ENST00000540352.5

MDM2-226, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,315 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-226ENST00000540352 SNRNP200O75643 2136 aaKnown RBP3.53□□□□□ -1.84
MDM2-226ENST00000540352 CHD7Q9P2D1 2997 aa3.53□□□□□ -1.84
MDM2-226ENST00000540352 DYSFO75923 2080 aa3.52□□□□□ -1.85
MDM2-226ENST00000540352 C11orf86A6NJI1 115 aa3.52□□□□□ -1.85
MDM2-226ENST00000540352 IBA57-AS1B1ANH7 110 aa3.52□□□□□ -1.85
MDM2-226ENST00000540352 LINC01565O15544 149 aa3.52□□□□□ -1.85
MDM2-226ENST00000540352 NDUFB3O43676 98 aa3.52□□□□□ -1.85
MDM2-226ENST00000540352 IGLV2-11P01706 119 aa3.52□□□□□ -1.85
MDM2-226ENST00000540352 CCKP06307 115 aa3.52□□□□□ -1.85
MDM2-226ENST00000540352 LGALS3P17931 250 aaKnown RBP3.52□□□□□ -1.85
MDM2-226ENST00000540352 PRCDQ00LT1 54 aa3.52□□□□□ -1.85
MDM2-226ENST00000540352 NSUN5P1Q3KNT7 163 aa3.52□□□□□ -1.85
MDM2-226ENST00000540352 CXCL17Q6UXB2 119 aa3.52□□□□□ -1.85
MDM2-226ENST00000540352 PRNTQ86SH4 94 aa3.52□□□□□ -1.85
MDM2-226ENST00000540352 DYNAPQ8N1N2 210 aa3.52□□□□□ -1.85
MDM2-226ENST00000540352 LYPD1Q8N2G4 141 aa3.52□□□□□ -1.85
MDM2-226ENST00000540352 NFAM1Q8NET5 270 aaPredicted RBP3.52□□□□□ -1.85
MDM2-226ENST00000540352 RNASE6Q93091 150 aaKnown RBP3.52□□□□□ -1.85
MDM2-226ENST00000540352 TOMM6Q96B49 74 aa3.52□□□□□ -1.85
MDM2-226ENST00000540352 MRPL53Q96EL3 112 aaKnown RBP3.52□□□□□ -1.85
MDM2-226ENST00000540352 ZNF71Q9NQZ8 489 aaPredicted RBP3.52□□□□□ -1.85
MDM2-226ENST00000540352 PHPT1Q9NRX4 125 aaPredicted RBP3.52□□□□□ -1.85
MDM2-226ENST00000540352 UBE2D4Q9Y2X8 147 aa3.52□□□□□ -1.85
MDM2-226ENST00000540352 Q9Y3F1 56 aa3.52□□□□□ -1.85
MDM2-226ENST00000540352 TRAV7A0A075B6U4 112 aa3.51□□□□□ -1.85
MDM2-226ENST00000540352 IGKV1OR2-108A0A075B7D4 117 aa3.51□□□□□ -1.85
MDM2-226ENST00000540352 IGHV1-69DA0A0B4J2H0 117 aa3.51□□□□□ -1.85
MDM2-226ENST00000540352 TRBV10-3A0A0K0K1G6 114 aa3.51□□□□□ -1.85
MDM2-226ENST00000540352 FAM223BA6NKX1 122 aa3.51□□□□□ -1.85
MDM2-226ENST00000540352 LYRM9A8MSI8 78 aa3.51□□□□□ -1.85
MDM2-226ENST00000540352 NXPH4O95158 308 aa3.51□□□□□ -1.85
MDM2-226ENST00000540352 IGF1P05019 195 aa3.51□□□□□ -1.85
MDM2-226ENST00000540352 MAGEA5P43359 124 aa3.51□□□□□ -1.85
MDM2-226ENST00000540352 RBM3P98179 157 aaKnown RBP3.51□□□□□ -1.85
MDM2-226ENST00000540352 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.51□□□□□ -1.85
MDM2-226ENST00000540352 FAM53AQ6NSI3 398 aaPredicted RBP3.51□□□□□ -1.85
MDM2-226ENST00000540352 Q6ZTC4 211 aa3.51□□□□□ -1.85
MDM2-226ENST00000540352 FAM223AQ8IWN6 122 aa3.51□□□□□ -1.85
MDM2-226ENST00000540352 EEF1AKMT3Q96AZ1 226 aa3.51□□□□□ -1.85
MDM2-226ENST00000540352 SCGB3A1Q96QR1 104 aa3.51□□□□□ -1.85
MDM2-226ENST00000540352 MOB4Q9Y3A3 225 aa3.51□□□□□ -1.85
MDM2-226ENST00000540352 C2orf16Q68DN1 1984 aa3.51□□□□□ -1.85
MDM2-226ENST00000540352 PDE4DIPQ5VU43 2346 aa3.5□□□□□ -1.85
MDM2-226ENST00000540352 IGHV1-45A0A0A0MS14 117 aa3.5□□□□□ -1.85
MDM2-226ENST00000540352 SMKR1H3BMG3 65 aa3.5□□□□□ -1.85
MDM2-226ENST00000540352 H3BTX0 84 aa3.5□□□□□ -1.85
MDM2-226ENST00000540352 H7C2G1 150 aa3.5□□□□□ -1.85
MDM2-226ENST00000540352 J3QT63 122 aa3.5□□□□□ -1.85
MDM2-226ENST00000540352 M0R3E3 92 aa3.5□□□□□ -1.85
MDM2-226ENST00000540352 CCL21O00585 134 aa3.5□□□□□ -1.85
MDM2-226ENST00000540352 LEPROTO15243 131 aa3.5□□□□□ -1.85
MDM2-226ENST00000540352 DNAL4O96015 105 aa3.5□□□□□ -1.85
MDM2-226ENST00000540352 IGKV3-11P04433 115 aa3.5□□□□□ -1.85
MDM2-226ENST00000540352 PATE2Q6UY27 113 aa3.5□□□□□ -1.85
MDM2-226ENST00000540352 C16orf47Q6ZP98 133 aaPredicted RBP3.5□□□□□ -1.85
MDM2-226ENST00000540352 ZNF826PQ6ZT77 177 aa3.5□□□□□ -1.85
MDM2-226ENST00000540352 KTN1-AS1Q86SY8 53 aa3.5□□□□□ -1.85
MDM2-226ENST00000540352 ZNF491Q8N8L2 437 aa3.5□□□□□ -1.85
MDM2-226ENST00000540352 AMELXQ99217 191 aa3.5□□□□□ -1.85
MDM2-226ENST00000540352 TM2D3Q9BRN9 247 aa3.5□□□□□ -1.85
MDM2-226ENST00000540352 HES7Q9BYE0 225 aa3.5□□□□□ -1.85
MDM2-226ENST00000540352 SZT2Q5T011 3432 aa3.5□□□□□ -1.85
MDM2-226ENST00000540352 EYSQ5T1H1 3165 aa3.5□□□□□ -1.85
MDM2-226ENST00000540352 LAMA3Q16787 3333 aa3.49□□□□□ -1.85
MDM2-226ENST00000540352 IGHV3OR16-10A0A075B7F0 116 aa3.49□□□□□ -1.85
MDM2-226ENST00000540352 IGHV1OR21-1A0A087WYE8 117 aa3.49□□□□□ -1.85
MDM2-226ENST00000540352 IGLV3-32A0A0A0MS00 114 aa3.49□□□□□ -1.85
MDM2-226ENST00000540352 TRAV13-2A0A0B4J235 113 aa3.49□□□□□ -1.85
MDM2-226ENST00000540352 C12orf77C9JDV5 145 aa3.49□□□□□ -1.85
MDM2-226ENST00000540352 NDUFS5O43920 106 aa3.49□□□□□ -1.85
MDM2-226ENST00000540352 UBE2E1P51965 193 aa3.49□□□□□ -1.85
MDM2-226ENST00000540352 DAD1P61803 113 aa3.49□□□□□ -1.85
MDM2-226ENST00000540352 LYPD5Q6UWN5 251 aa3.49□□□□□ -1.85
MDM2-226ENST00000540352 MUSTN1Q8IVN3 82 aa3.49□□□□□ -1.85
MDM2-226ENST00000540352 C20orf197Q8N268 126 aa3.49□□□□□ -1.85
MDM2-226ENST00000540352 KLF14Q8TD94 323 aaPredicted RBP3.49□□□□□ -1.85
MDM2-226ENST00000540352 UBE2E2Q96LR5 201 aa3.49□□□□□ -1.85
MDM2-226ENST00000540352 DOCK7Q96N67 2140 aa3.49□□□□□ -1.85
MDM2-226ENST00000540352 OVOL2Q9BRP0 275 aa3.49□□□□□ -1.85
MDM2-226ENST00000540352 SMIM2Q9BVW6 85 aa3.49□□□□□ -1.85
MDM2-226ENST00000540352 RBM12B-AS1Q9P1G2 102 aa3.49□□□□□ -1.85
MDM2-226ENST00000540352 PRUNE2Q8WUY3 3088 aa3.49□□□□□ -1.85
MDM2-226ENST00000540352 C5orf42Q9H799 3197 aa3.49□□□□□ -1.85
MDM2-226ENST00000540352 TRAV8-3A0A0A6YYJ7 113 aa3.48□□□□□ -1.85
MDM2-226ENST00000540352 TRBV27A0A0K0K1C4 114 aa3.48□□□□□ -1.85
MDM2-226ENST00000540352 COX7A2LO14548 114 aa3.48□□□□□ -1.85
MDM2-226ENST00000540352 SH2D1AO60880 128 aa3.48□□□□□ -1.85
MDM2-226ENST00000540352 PPP1R17O96001 155 aa3.48□□□□□ -1.85
MDM2-226ENST00000540352 CRIP1P50238 77 aa3.48□□□□□ -1.85
MDM2-226ENST00000540352 APOC4P55056 127 aa3.48□□□□□ -1.85
MDM2-226ENST00000540352 ERHP84090 104 aaKnown RBP3.48□□□□□ -1.85
MDM2-226ENST00000540352 SS18Q15532 418 aa3.48□□□□□ -1.85
MDM2-226ENST00000540352 LY6G5BQ8NDX9 201 aa3.48□□□□□ -1.85
MDM2-226ENST00000540352 KLHL30-AS1Q8NEE0 82 aa3.48□□□□□ -1.85
MDM2-226ENST00000540352 TMEM141Q96I45 108 aa3.48□□□□□ -1.85
MDM2-226ENST00000540352 FGF23Q9GZV9 251 aaPredicted RBP3.48□□□□□ -1.85
MDM2-226ENST00000540352 MYO7AQ13402 2215 aa3.48□□□□□ -1.85
MDM2-226ENST00000540352 TET2Q6N021 2002 aaPredicted RBP3.48□□□□□ -1.85
MDM2-226ENST00000540352 NOTCH4Q99466 2003 aa3.48□□□□□ -1.85
MDM2-226ENST00000540352 IGLV4-69A0A075B6H9 119 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms