RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	NCKAP5	O14513	1909 aa		12.08	□□□□□ -0.47
NCAPD3-213	ENST00000534532	ASPHD1	Q5U4P2	390 aa		12.08	□□□□□ -0.48
NCAPD3-213	ENST00000534532	UBL5	Q9BZL1	73 aa		12.08	□□□□□ -0.48
NCAPD3-213	ENST00000534532	UNQ9165/PRO28630	Q6UXU0	137 aa		12.08	□□□□□ -0.48
NCAPD3-213	ENST00000534532	MAP6D1	Q9H9H5	199 aa		12.08	□□□□□ -0.48
NCAPD3-213	ENST00000534532	NDUFA1	O15239	70 aa		12.08	□□□□□ -0.48
NCAPD3-213	ENST00000534532	CCDC168	Q8NDH2	2452 aa		12.07	□□□□□ -0.48
NCAPD3-213	ENST00000534532	TRAV4	A0A0B4J268	109 aa		12.07	□□□□□ -0.48
NCAPD3-213	ENST00000534532		A0A0J9YX75	114 aa		12.07	□□□□□ -0.48
NCAPD3-213	ENST00000534532	TRBV12-3	P01733	135 aa		12.07	□□□□□ -0.48
NCAPD3-213	ENST00000534532		K7EN84	100 aa		12.07	□□□□□ -0.48
NCAPD3-213	ENST00000534532	HILS1	P60008	231 aa		12.07	□□□□□ -0.48
NCAPD3-213	ENST00000534532	RNF183	Q96D59	192 aa		12.07	□□□□□ -0.48
NCAPD3-213	ENST00000534532	FANCD2OS	Q96PS1	177 aa		12.07	□□□□□ -0.48
NCAPD3-213	ENST00000534532	ANAPC13	Q9BS18	74 aa		12.07	□□□□□ -0.48
NCAPD3-213	ENST00000534532	SPATA25	Q9BR10	227 aa		12.07	□□□□□ -0.48
NCAPD3-213	ENST00000534532	PLA2G2A	P14555	144 aa		12.06	□□□□□ -0.48
NCAPD3-213	ENST00000534532	PRAC2	D3DTV9	90 aa		12.06	□□□□□ -0.48
NCAPD3-213	ENST00000534532	IGF1	P05019	195 aa		12.06	□□□□□ -0.48
NCAPD3-213	ENST00000534532	PRO1854	Q9UHT4	67 aa		12.06	□□□□□ -0.48
NCAPD3-213	ENST00000534532	WNK1	Q9H4A3	2382 aa		12.06	□□□□□ -0.48
NCAPD3-213	ENST00000534532	PYY3	Q5JQD4	70 aa		12.06	□□□□□ -0.48
NCAPD3-213	ENST00000534532	RPL39L	Q96EH5	51 aa	Known RBP	12.06	□□□□□ -0.48
NCAPD3-213	ENST00000534532	FGF6	P10767	208 aa		12.06	□□□□□ -0.48
NCAPD3-213	ENST00000534532	MED14OS	P0DP75	135 aa		12.05	□□□□□ -0.48
NCAPD3-213	ENST00000534532	LYPD6	Q86Y78	171 aa		12.05	□□□□□ -0.48
NCAPD3-213	ENST00000534532	C15orf53	Q8NAA6	179 aa		12.05	□□□□□ -0.48
NCAPD3-213	ENST00000534532	VSIG2	Q96IQ7	327 aa		12.05	□□□□□ -0.48
NCAPD3-213	ENST00000534532	MORN5	Q5VZ52	161 aa		12.05	□□□□□ -0.48
NCAPD3-213	ENST00000534532	KLK12	Q9UKR0	248 aa		12.05	□□□□□ -0.48
NCAPD3-213	ENST00000534532	HIVEP3	Q5T1R4	2406 aa		12.04	□□□□□ -0.48
NCAPD3-213	ENST00000534532	C14orf177	Q52M58	125 aa		12.04	□□□□□ -0.48
NCAPD3-213	ENST00000534532		Q6ZSV7	163 aa		12.04	□□□□□ -0.48
NCAPD3-213	ENST00000534532	MRPL52	Q86TS9	123 aa	Known RBP	12.04	□□□□□ -0.48
NCAPD3-213	ENST00000534532	GATA1	P15976	413 aa	Predicted RBP	12.04	□□□□□ -0.48
NCAPD3-213	ENST00000534532	HAMP	P81172	84 aa		12.04	□□□□□ -0.48
NCAPD3-213	ENST00000534532	ZFAND6	Q6FIF0	208 aa		12.04	□□□□□ -0.48
NCAPD3-213	ENST00000534532	LGALS9	O00182	355 aa		12.04	□□□□□ -0.48
NCAPD3-213	ENST00000534532	ZFP2	Q6ZN57	461 aa		12.03	□□□□□ -0.48
NCAPD3-213	ENST00000534532	DEFB105A	Q8NG35	78 aa		12.03	□□□□□ -0.48
NCAPD3-213	ENST00000534532	SMIM9	A6NGZ8	99 aa		12.03	□□□□□ -0.48
NCAPD3-213	ENST00000534532	C4orf48	Q5BLP8	95 aa		12.03	□□□□□ -0.48
NCAPD3-213	ENST00000534532	BVES-AS1	Q5T3Y7	98 aa		12.03	□□□□□ -0.48
NCAPD3-213	ENST00000534532	LINC00574	Q9H8X3	128 aa		12.03	□□□□□ -0.48
NCAPD3-213	ENST00000534532	UBE2A	P49459	152 aa		12.03	□□□□□ -0.48
NCAPD3-213	ENST00000534532		E7EUB6	86 aa		12.03	□□□□□ -0.48
NCAPD3-213	ENST00000534532	COX8A	P10176	69 aa		12.03	□□□□□ -0.48
NCAPD3-213	ENST00000534532	C22orf34	Q6ZV56	151 aa		12.02	□□□□□ -0.48
NCAPD3-213	ENST00000534532	C11orf71	Q6IPW1	123 aa		12.02	□□□□□ -0.49
NCAPD3-213	ENST00000534532	DKK2	Q9UBU2	259 aa		12.02	□□□□□ -0.49
NCAPD3-213	ENST00000534532	PRSS47	A8MTI9	375 aa		12.01	□□□□□ -0.49
NCAPD3-213	ENST00000534532	ZNF664	Q8N3J9	261 aa		12.01	□□□□□ -0.49
NCAPD3-213	ENST00000534532	FAM167A-AS1	Q96KT0	104 aa		12.01	□□□□□ -0.49
NCAPD3-213	ENST00000534532	IGLL1	P15814	213 aa		12.01	□□□□□ -0.49
NCAPD3-213	ENST00000534532	COX7B2	Q8TF08	81 aa		12.01	□□□□□ -0.49
NCAPD3-213	ENST00000534532	TMEM131	Q92545	1883 aa		12.01	□□□□□ -0.49
NCAPD3-213	ENST00000534532	CXCL5	P42830	114 aa		12.01	□□□□□ -0.49
NCAPD3-213	ENST00000534532	UTF1	Q5T230	341 aa		12.01	□□□□□ -0.49
NCAPD3-213	ENST00000534532	CCDC140	Q96MF4	163 aa		12.01	□□□□□ -0.49
NCAPD3-213	ENST00000534532	TRBV10-1	A0A0K0K1A3	114 aa		12	□□□□□ -0.49
NCAPD3-213	ENST00000534532	PCP4	P48539	62 aa		12	□□□□□ -0.49
NCAPD3-213	ENST00000534532	MSRB1	Q9NZV6	116 aa		12	□□□□□ -0.49
NCAPD3-213	ENST00000534532	DEFB114	Q30KQ6	69 aa		12	□□□□□ -0.49
NCAPD3-213	ENST00000534532	LINC01548	A6NM66	108 aa		12	□□□□□ -0.49
NCAPD3-213	ENST00000534532	LYRM9	A8MSI8	78 aa		12	□□□□□ -0.49
NCAPD3-213	ENST00000534532	DEFB1	P60022	68 aa		12	□□□□□ -0.49
NCAPD3-213	ENST00000534532	NAV3	Q8IVL0	2385 aa		11.99	□□□□□ -0.49
NCAPD3-213	ENST00000534532	SPAG11B	Q08648	103 aa		11.99	□□□□□ -0.49
NCAPD3-213	ENST00000534532	ZNF747	Q9BV97	191 aa		11.99	□□□□□ -0.49
NCAPD3-213	ENST00000534532	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	11.99	□□□□□ -0.49
NCAPD3-213	ENST00000534532	COX11	Q9Y6N1	276 aa		11.99	□□□□□ -0.49
NCAPD3-213	ENST00000534532		A0A0J9YXV3	536 aa		11.99	□□□□□ -0.49
NCAPD3-213	ENST00000534532	hADV29S1	A0JD25	119 aa		11.99	□□□□□ -0.49
NCAPD3-213	ENST00000534532	IFITM1	P13164	125 aa		11.99	□□□□□ -0.49
NCAPD3-213	ENST00000534532	TIMM17A	Q99595	171 aa		11.99	□□□□□ -0.49
NCAPD3-213	ENST00000534532	FREM1	Q5H8C1	2179 aa		11.99	□□□□□ -0.49
NCAPD3-213	ENST00000534532	IGLC2	P0DOY2	106 aa		11.98	□□□□□ -0.49
NCAPD3-213	ENST00000534532	PLXNB3	Q9ULL4	1909 aa		11.98	□□□□□ -0.49
NCAPD3-213	ENST00000534532	DEFB131B	A0A096LNP1	70 aa		11.97	□□□□□ -0.49
NCAPD3-213	ENST00000534532	IGLV2-14	P01704	120 aa		11.97	□□□□□ -0.49
NCAPD3-213	ENST00000534532	CEND1	Q8N111	149 aa		11.97	□□□□□ -0.49
NCAPD3-213	ENST00000534532	IGHV4-4	A0A075B6R2	117 aa		11.97	□□□□□ -0.49
NCAPD3-213	ENST00000534532	IGF2R	P11717	2491 aa		11.97	□□□□□ -0.49
NCAPD3-213	ENST00000534532	FUS	P35637	526 aa	Known RBP eCLIP	11.97	□□□□□ -0.49	3e-6	■■■□□ 18.5
NCAPD3-213	ENST00000534532	FAM222A	Q5U5X8	452 aa		11.97	□□□□□ -0.49
NCAPD3-213	ENST00000534532	TRAV26-1	A0A087WT03	109 aa		11.97	□□□□□ -0.49
NCAPD3-213	ENST00000534532	NDUFS5	O43920	106 aa		11.97	□□□□□ -0.49
NCAPD3-213	ENST00000534532	SND1-IT1	Q9HBX3	110 aa		11.97	□□□□□ -0.49
NCAPD3-213	ENST00000534532	PROP1	O75360	226 aa		11.96	□□□□□ -0.49
NCAPD3-213	ENST00000534532	ORMDL1	Q9P0S3	153 aa		11.96	□□□□□ -0.49
NCAPD3-213	ENST00000534532	MDFIC	Q9P1T7	246 aa		11.96	□□□□□ -0.49
NCAPD3-213	ENST00000534532	CARD19	Q96LW7	228 aa		11.96	□□□□□ -0.49
NCAPD3-213	ENST00000534532	DSCAM	O60469	2012 aa		11.96	□□□□□ -0.5
NCAPD3-213	ENST00000534532	IGLC3	P0DOY3	106 aa		11.96	□□□□□ -0.5
NCAPD3-213	ENST00000534532	EBI3	Q14213	229 aa		11.96	□□□□□ -0.5
NCAPD3-213	ENST00000534532	SORL1	Q92673	2214 aa		11.96	□□□□□ -0.5
NCAPD3-213	ENST00000534532	SIVA1	O15304	175 aa		11.95	□□□□□ -0.5
NCAPD3-213	ENST00000534532	C10orf91	Q5T1B1	145 aa		11.95	□□□□□ -0.5
NCAPD3-213	ENST00000534532	ODF3	Q96PU9	254 aa		11.95	□□□□□ -0.5
NCAPD3-213	ENST00000534532	UBE2V1	Q13404	147 aa		11.95	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 232.1 ms