RNA–Protein interactions for RNA: ENST00000524813.2

PCDHB18P-201, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 2,368 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-201ENST00000524813 TSPEAR-AS2P59090 65 aa13.71□□□□□ -0.22
PCDHB18P-201ENST00000524813 PMVKQ15126 192 aa13.71□□□□□ -0.22
PCDHB18P-201ENST00000524813 SOCS3O14543 225 aa13.7□□□□□ -0.22
PCDHB18P-201ENST00000524813 ARL3P36405 182 aa13.7□□□□□ -0.22
PCDHB18P-201ENST00000524813 TRBV20-1A0A075B6N2 111 aa13.69□□□□□ -0.22
PCDHB18P-201ENST00000524813 A0A1W2PPR1 153 aa13.69□□□□□ -0.22
PCDHB18P-201ENST00000524813 RPL39P62891 51 aaKnown RBP13.69□□□□□ -0.22
PCDHB18P-201ENST00000524813 POM121L12Q8N7R1 296 aa13.69□□□□□ -0.22
PCDHB18P-201ENST00000524813 C5orf56Q8N8D9 126 aa13.69□□□□□ -0.22
PCDHB18P-201ENST00000524813 LINC00315P59091 139 aa13.69□□□□□ -0.22
PCDHB18P-201ENST00000524813 FAM19A4Q96LR4 140 aa13.69□□□□□ -0.22
PCDHB18P-201ENST00000524813 MED13LQ71F56 2210 aa13.69□□□□□ -0.22
PCDHB18P-201ENST00000524813 TRAV41A0A0B4J266 112 aa13.68□□□□□ -0.22
PCDHB18P-201ENST00000524813 A8MWV9 139 aa13.68□□□□□ -0.22
PCDHB18P-201ENST00000524813 TMEM170BQ5T4T1 132 aa13.68□□□□□ -0.22
PCDHB18P-201ENST00000524813 SBSPONQ8IVN8 264 aa13.68□□□□□ -0.22
PCDHB18P-201ENST00000524813 SLC25A29Q8N8R3 303 aa13.68□□□□□ -0.22
PCDHB18P-201ENST00000524813 KIF25-AS1Q9Y6Z4 181 aa13.68□□□□□ -0.22
PCDHB18P-201ENST00000524813 TRBV12-3P01733 135 aa13.68□□□□□ -0.22
PCDHB18P-201ENST00000524813 TMEM219Q86XT9 240 aa13.68□□□□□ -0.22
PCDHB18P-201ENST00000524813 C10orf126Q8N4M7 172 aa13.68□□□□□ -0.22
PCDHB18P-201ENST00000524813 SCGB1C2P0DMR2 95 aa13.67□□□□□ -0.22
PCDHB18P-201ENST00000524813 RPL11P62913 178 aaKnown RBP13.67□□□□□ -0.22
PCDHB18P-201ENST00000524813 IGHV4OR15-8A0A075B7B6 117 aa13.67□□□□□ -0.22
PCDHB18P-201ENST00000524813 A0A087WW49 117 aa13.67□□□□□ -0.22
PCDHB18P-201ENST00000524813 FAM223BA6NKX1 122 aa13.67□□□□□ -0.22
PCDHB18P-201ENST00000524813 POLR2KP53803 58 aaKnown RBP13.67□□□□□ -0.22
PCDHB18P-201ENST00000524813 FAM223AQ8IWN6 122 aa13.67□□□□□ -0.22
PCDHB18P-201ENST00000524813 ZNRF2Q8NHG8 242 aa13.67□□□□□ -0.22
PCDHB18P-201ENST00000524813 TMEM141Q96I45 108 aa13.67□□□□□ -0.22
PCDHB18P-201ENST00000524813 JPT2Q9H910 190 aa13.67□□□□□ -0.22
PCDHB18P-201ENST00000524813 FLNCQ14315 2725 aa13.67□□□□□ -0.22
PCDHB18P-201ENST00000524813 IGKV3-7A0A075B6H7 116 aa13.66□□□□□ -0.22
PCDHB18P-201ENST00000524813 NXPH4O95158 308 aa13.66□□□□□ -0.22
PCDHB18P-201ENST00000524813 RPL32P62910 135 aaKnown RBP13.66□□□□□ -0.22
PCDHB18P-201ENST00000524813 SUMO4Q6EEV6 95 aa13.66□□□□□ -0.22
PCDHB18P-201ENST00000524813 ANKRD29Q8N6D5 301 aa13.66□□□□□ -0.22
PCDHB18P-201ENST00000524813 PRO1854Q9UHT4 67 aa13.66□□□□□ -0.22
PCDHB18P-201ENST00000524813 VPS13CQ709C8 3753 aa13.66□□□□□ -0.22
PCDHB18P-201ENST00000524813 ZNF688P0C7X2 276 aa13.66□□□□□ -0.22
PCDHB18P-201ENST00000524813 APRG1Q8IVJ8 170 aa13.66□□□□□ -0.22
PCDHB18P-201ENST00000524813 VCX2Q9H322 139 aa13.66□□□□□ -0.22
PCDHB18P-201ENST00000524813 UBTD1Q9HAC8 227 aa13.66□□□□□ -0.22
PCDHB18P-201ENST00000524813 SPTAN1Q13813 2472 aaKnown RBP13.66□□□□□ -0.22
PCDHB18P-201ENST00000524813 KIR2DL4Q99706 377 aa13.65□□□□□ -0.22
PCDHB18P-201ENST00000524813 ZNF462Q96JM2 2506 aa13.65□□□□□ -0.22
PCDHB18P-201ENST00000524813 VCYO14598 125 aa13.65□□□□□ -0.22
PCDHB18P-201ENST00000524813 AMELXQ99217 191 aa13.65□□□□□ -0.22
PCDHB18P-201ENST00000524813 TIMM17AQ99595 171 aa13.65□□□□□ -0.22
PCDHB18P-201ENST00000524813 MUC4Q99102 2169 aa13.65□□□□□ -0.23
PCDHB18P-201ENST00000524813 A0A087WWL8 130 aa13.64□□□□□ -0.23
PCDHB18P-201ENST00000524813 NPFFO15130 113 aa13.64□□□□□ -0.23
PCDHB18P-201ENST00000524813 F5H697 171 aa13.64□□□□□ -0.23
PCDHB18P-201ENST00000524813 J3QQQ9 107 aa13.64□□□□□ -0.23
PCDHB18P-201ENST00000524813 NDUFA4O00483 81 aa13.64□□□□□ -0.23
PCDHB18P-201ENST00000524813 ZNF876PQ49A33 203 aa13.64□□□□□ -0.23
PCDHB18P-201ENST00000524813 C19orf54Q5BKX5 351 aa13.64□□□□□ -0.23
PCDHB18P-201ENST00000524813 ZNF843Q8N446 348 aa13.64□□□□□ -0.23
PCDHB18P-201ENST00000524813 MYO18BQ8IUG5 2567 aa13.63□□□□□ -0.23
PCDHB18P-201ENST00000524813 USP9XQ93008 2570 aaPredicted RBP13.63□□□□□ -0.23
PCDHB18P-201ENST00000524813 AKAP6Q13023 2319 aa13.63□□□□□ -0.23
PCDHB18P-201ENST00000524813 LGALS3P17931 250 aaKnown RBP13.63□□□□□ -0.23
PCDHB18P-201ENST00000524813 RAX2Q96IS3 184 aa13.63□□□□□ -0.23
PCDHB18P-201ENST00000524813 SDHAF1A6NFY7 115 aa13.62□□□□□ -0.23
PCDHB18P-201ENST00000524813 MOB4Q9Y3A3 225 aa13.61□□□□□ -0.23
PCDHB18P-201ENST00000524813 FAM159AQ6UWV7 190 aa13.61□□□□□ -0.23
PCDHB18P-201ENST00000524813 RNF183Q96D59 192 aa13.61□□□□□ -0.23
PCDHB18P-201ENST00000524813 ERG28Q9UKR5 140 aa13.61□□□□□ -0.23
PCDHB18P-201ENST00000524813 TRBV7-9A0A0J9YWB2 115 aa13.6□□□□□ -0.23
PCDHB18P-201ENST00000524813 A4D1N5 150 aa13.6□□□□□ -0.23
PCDHB18P-201ENST00000524813 IGHV3-11P01762 117 aa13.6□□□□□ -0.23
PCDHB18P-201ENST00000524813 ZFHX3Q15911 3703 aa13.6□□□□□ -0.23
PCDHB18P-201ENST00000524813 DOPEY1Q5JWR5 2465 aa13.6□□□□□ -0.23
PCDHB18P-201ENST00000524813 SLC25A20O43772 301 aa13.6□□□□□ -0.23
PCDHB18P-201ENST00000524813 IGHV3OR16-10A0A075B7F0 116 aa13.59□□□□□ -0.23
PCDHB18P-201ENST00000524813 C9JAW5 83 aa13.59□□□□□ -0.23
PCDHB18P-201ENST00000524813 EIF4EBP3O60516 100 aaPredicted RBP13.59□□□□□ -0.23
PCDHB18P-201ENST00000524813 CRIP2P52943 208 aaPredicted RBP13.59□□□□□ -0.23
PCDHB18P-201ENST00000524813 TRPT1Q86TN4 253 aaKnown RBP13.59□□□□□ -0.23
PCDHB18P-201ENST00000524813 OPRPNQ99935 248 aaPredicted RBP13.59□□□□□ -0.23
PCDHB18P-201ENST00000524813 ZNF256Q9Y2P7 627 aaPredicted RBP13.59□□□□□ -0.23
PCDHB18P-201ENST00000524813 SVIPQ8NHG7 77 aa13.59□□□□□ -0.23
PCDHB18P-201ENST00000524813 TRBV27A0A0K0K1C4 114 aa13.58□□□□□ -0.24
PCDHB18P-201ENST00000524813 KLLNB2CW77 178 aa13.58□□□□□ -0.24
PCDHB18P-201ENST00000524813 TMEM262E9PQX1 116 aa13.58□□□□□ -0.24
PCDHB18P-201ENST00000524813 H7C2G1 150 aa13.58□□□□□ -0.24
PCDHB18P-201ENST00000524813 IGHV3-33P01772 117 aa13.58□□□□□ -0.24
PCDHB18P-201ENST00000524813 SRD5A1P18405 259 aa13.58□□□□□ -0.24
PCDHB18P-201ENST00000524813 RHPN1-AS1Q9BWJ2 59 aa13.58□□□□□ -0.24
PCDHB18P-201ENST00000524813 FAM74A4Q5TZK3 123 aa13.58□□□□□ -0.24
PCDHB18P-201ENST00000524813 TMEM263Q8WUH6 116 aaKnown RBP13.58□□□□□ -0.24
PCDHB18P-201ENST00000524813 TRAV2A0A0B4J234 112 aa13.57□□□□□ -0.24
PCDHB18P-201ENST00000524813 UTP20O75691 2785 aaKnown RBP13.57□□□□□ -0.24
PCDHB18P-201ENST00000524813 LEPROTO15243 131 aa13.57□□□□□ -0.24
PCDHB18P-201ENST00000524813 GATA3P23771 443 aa13.57□□□□□ -0.24
PCDHB18P-201ENST00000524813 LMO4P61968 165 aa13.57□□□□□ -0.24
PCDHB18P-201ENST00000524813 ANAPC13Q9BS18 74 aa13.57□□□□□ -0.24
PCDHB18P-201ENST00000524813 IGHV3-64A0A075B6Q5 118 aa13.56□□□□□ -0.24
PCDHB18P-201ENST00000524813 TMEM223A0PJW6 202 aa13.56□□□□□ -0.24
PCDHB18P-201ENST00000524813 LGALS9O00182 355 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms