RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 MRPL23Q16540 153 aaKnown RBP8.86□□□□□ -0.99
VEGFA-224ENST00000523873 TMEM241Q24JQ0 296 aa8.86□□□□□ -0.99
VEGFA-224ENST00000523873 FAM74A3Q4VXF1 159 aa8.86□□□□□ -0.99
VEGFA-224ENST00000523873 LYZL1Q6UWQ5 148 aa8.86□□□□□ -0.99
VEGFA-224ENST00000523873 ISOC2Q96AB3 205 aa8.86□□□□□ -0.99
VEGFA-224ENST00000523873 MSRB1Q9NZV6 116 aa8.86□□□□□ -0.99
VEGFA-224ENST00000523873 Q9UF83 564 aa8.86□□□□□ -0.99
VEGFA-224ENST00000523873 TRBV6-4A0A1B0GX49 114 aa8.85□□□□□ -0.99
VEGFA-224ENST00000523873 XKRY2A2RUG3 117 aa8.85□□□□□ -0.99
VEGFA-224ENST00000523873 M0R2N4 97 aa8.85□□□□□ -0.99
VEGFA-224ENST00000523873 CIDEAO60543 219 aa8.85□□□□□ -0.99
VEGFA-224ENST00000523873 SRIP30626 198 aa8.85□□□□□ -0.99
VEGFA-224ENST00000523873 RHOHQ15669 191 aa8.85□□□□□ -0.99
VEGFA-224ENST00000523873 RNF212Q495C1 297 aa8.85□□□□□ -0.99
VEGFA-224ENST00000523873 SOHLH1Q5JUK2 328 aa8.85□□□□□ -0.99
VEGFA-224ENST00000523873 ZFP2Q6ZN57 461 aa8.85□□□□□ -0.99
VEGFA-224ENST00000523873 GTSF1Q8WW33 167 aa8.85□□□□□ -0.99
VEGFA-224ENST00000523873 SMDT1Q9H4I9 107 aa8.85□□□□□ -0.99
VEGFA-224ENST00000523873 NAT8Q9UHE5 227 aa8.85□□□□□ -0.99
VEGFA-224ENST00000523873 GAGE12JA6NER3 117 aa8.84□□□□□ -0.99
VEGFA-224ENST00000523873 RHODO00212 210 aa8.84□□□□□ -0.99
VEGFA-224ENST00000523873 CTRLP40313 264 aa8.84□□□□□ -0.99
VEGFA-224ENST00000523873 CACNG7P62955 275 aa8.84□□□□□ -0.99
VEGFA-224ENST00000523873 GAGE1Q13065 139 aa8.84□□□□□ -0.99
VEGFA-224ENST00000523873 GAGE4Q13068 117 aa8.84□□□□□ -0.99
VEGFA-224ENST00000523873 GAGE5Q13069 117 aa8.84□□□□□ -0.99
VEGFA-224ENST00000523873 GAGE13Q4V321 117 aa8.84□□□□□ -0.99
VEGFA-224ENST00000523873 LYPD5Q6UWN5 251 aa8.84□□□□□ -0.99
VEGFA-224ENST00000523873 ZNRF2Q8NHG8 242 aa8.84□□□□□ -0.99
VEGFA-224ENST00000523873 PRADC1Q9BSG0 188 aa8.84□□□□□ -0.99
VEGFA-224ENST00000523873 OSTCQ9NRP0 149 aa8.84□□□□□ -0.99
VEGFA-224ENST00000523873 ZNF56Q15929 161 aa8.83□□□□□ -1
VEGFA-224ENST00000523873 NEGR1Q7Z3B1 354 aa8.83□□□□□ -1
VEGFA-224ENST00000523873 PGLYRP4Q96LB8 373 aa8.83□□□□□ -1
VEGFA-224ENST00000523873 KIF25-AS1Q9Y6Z4 181 aa8.83□□□□□ -1
VEGFA-224ENST00000523873 V9GYV3 84 aa8.83□□□□□ -1
VEGFA-224ENST00000523873 A0A1W2PPQ1 181 aa8.82□□□□□ -1
VEGFA-224ENST00000523873 F2Z2F3 143 aa8.82□□□□□ -1
VEGFA-224ENST00000523873 MGPP08493 103 aa8.82□□□□□ -1
VEGFA-224ENST00000523873 NTF3P20783 257 aa8.82□□□□□ -1
VEGFA-224ENST00000523873 OR10G8Q8NGN5 311 aa8.82□□□□□ -1
VEGFA-224ENST00000523873 AP1S3Q96PC3 154 aa8.82□□□□□ -1
VEGFA-224ENST00000523873 MRPS16Q9Y3D3 137 aaKnown RBP8.82□□□□□ -1
VEGFA-224ENST00000523873 A8MWL6 223 aa8.81□□□□□ -1
VEGFA-224ENST00000523873 F5H697 171 aa8.81□□□□□ -1
VEGFA-224ENST00000523873 EVI2AP22794 236 aa8.81□□□□□ -1
VEGFA-224ENST00000523873 LINC00315P59091 139 aa8.81□□□□□ -1
VEGFA-224ENST00000523873 TWIST1Q15672 202 aa8.81□□□□□ -1
VEGFA-224ENST00000523873 CT83Q5H943 113 aa8.81□□□□□ -1
VEGFA-224ENST00000523873 C15orf54Q8N8G6 183 aa8.81□□□□□ -1
VEGFA-224ENST00000523873 SMIM17P0DL12 118 aa8.8□□□□□ -1
VEGFA-224ENST00000523873 LINC00694P0DN24 101 aa8.8□□□□□ -1
VEGFA-224ENST00000523873 FAM3BP58499 235 aaPredicted RBP8.8□□□□□ -1
VEGFA-224ENST00000523873 RAB4BP61018 213 aa8.8□□□□□ -1
VEGFA-224ENST00000523873 COMMD7Q86VX2 200 aa8.8□□□□□ -1
VEGFA-224ENST00000523873 TSKUQ8WUA8 353 aa8.8□□□□□ -1
VEGFA-224ENST00000523873 Q9H8V8 135 aa8.8□□□□□ -1
VEGFA-224ENST00000523873 HIGD1CA8MV81 97 aa8.79□□□□□ -1
VEGFA-224ENST00000523873 ADCYAP1P18509 176 aa8.79□□□□□ -1
VEGFA-224ENST00000523873 FOXA3P55318 350 aaPredicted RBP8.79□□□□□ -1
VEGFA-224ENST00000523873 WFDC10BQ8IUB3 73 aa8.79□□□□□ -1
VEGFA-224ENST00000523873 ATP6V0E2Q8NHE4 81 aa8.79□□□□□ -1
VEGFA-224ENST00000523873 UPK3BQ9BT76 320 aa8.79□□□□□ -1
VEGFA-224ENST00000523873 CNFNQ9BYD5 112 aa8.79□□□□□ -1
VEGFA-224ENST00000523873 TRGC1P0CF51 173 aa8.78□□□□□ -1
VEGFA-224ENST00000523873 SUMO4Q6EEV6 95 aa8.78□□□□□ -1
VEGFA-224ENST00000523873 WDR73Q6P4I2 378 aa8.78□□□□□ -1
VEGFA-224ENST00000523873 Q6ZR54 194 aa8.78□□□□□ -1
VEGFA-224ENST00000523873 NEXN-AS1Q8NBZ9 246 aa8.78□□□□□ -1
VEGFA-224ENST00000523873 NBDYA0A0U1RRE5 68 aa8.77□□□□□ -1.01
VEGFA-224ENST00000523873 UQCC3Q6UW78 93 aa8.77□□□□□ -1.01
VEGFA-224ENST00000523873 SH2D6Q7Z4S9 175 aa8.77□□□□□ -1.01
VEGFA-224ENST00000523873 NUP35Q8NFH5 326 aa8.77□□□□□ -1.01
VEGFA-224ENST00000523873 KRTAP1-5Q9BYS1 174 aa8.77□□□□□ -1.01
VEGFA-224ENST00000523873 GFRA4Q9GZZ7 299 aa8.77□□□□□ -1.01
VEGFA-224ENST00000523873 DPH3P1Q9H4G8 78 aa8.77□□□□□ -1.01
VEGFA-224ENST00000523873 LINC00862A6NCI5 91 aa8.76□□□□□ -1.01
VEGFA-224ENST00000523873 RPL36AP83881 106 aaKnown RBP8.76□□□□□ -1.01
VEGFA-224ENST00000523873 RPL36ALQ969Q0 106 aaKnown RBP8.76□□□□□ -1.01
VEGFA-224ENST00000523873 BORCS7Q96B45 105 aa8.76□□□□□ -1.01
VEGFA-224ENST00000523873 GTSF1LQ9H1H1 148 aa8.76□□□□□ -1.01
VEGFA-224ENST00000523873 TRBV7-3A0A075B6L6 115 aa8.75□□□□□ -1.01
VEGFA-224ENST00000523873 IGHV3-38A0A0C4DH36 116 aa8.75□□□□□ -1.01
VEGFA-224ENST00000523873 TRBV10-1A0A0K0K1A3 114 aa8.75□□□□□ -1.01
VEGFA-224ENST00000523873 A0A1B0GUT8 65 aa8.75□□□□□ -1.01
VEGFA-224ENST00000523873 SMIM27A0A1W2PRY6 76 aa8.75□□□□□ -1.01
VEGFA-224ENST00000523873 TMEM218A2RU14 115 aa8.75□□□□□ -1.01
VEGFA-224ENST00000523873 F8W036 122 aa8.75□□□□□ -1.01
VEGFA-224ENST00000523873 M0QY20 66 aa8.75□□□□□ -1.01
VEGFA-224ENST00000523873 SIVA1O15304 175 aa8.75□□□□□ -1.01
VEGFA-224ENST00000523873 UBE2D3P61077 147 aa8.75□□□□□ -1.01
VEGFA-224ENST00000523873 UBE2D2P62837 147 aa8.75□□□□□ -1.01
VEGFA-224ENST00000523873 TRAV26-2A0A0B4J265 109 aa8.74□□□□□ -1.01
VEGFA-224ENST00000523873 FAM231BA6NCW3 169 aa8.74□□□□□ -1.01
VEGFA-224ENST00000523873 TIRAPP58753 221 aa8.74□□□□□ -1.01
VEGFA-224ENST00000523873 OR10J3Q5JRS4 329 aa8.74□□□□□ -1.01
VEGFA-224ENST00000523873 LELP1Q5T871 98 aa8.74□□□□□ -1.01
VEGFA-224ENST00000523873 NAT8BQ9UHF3 227 aa8.74□□□□□ -1.01
VEGFA-224ENST00000523873 DNAH10Q8IVF4 4471 aa8.74□□□□□ -1.01
VEGFA-224ENST00000523873 FRAS1Q86XX4 4008 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms