RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-223	ENST00000520520	PRAC2	D3DTV9	90 aa		6.56	□□□□□ -1.36
CTNNA1-223	ENST00000520520	NDUFA4	O00483	81 aa		6.56	□□□□□ -1.36
CTNNA1-223	ENST00000520520	S100A4	P26447	101 aa	Known RBP	6.56	□□□□□ -1.36
CTNNA1-223	ENST00000520520	ARL3	P36405	182 aa		6.56	□□□□□ -1.36
CTNNA1-223	ENST00000520520	HERVK_113	P61574	105 aa		6.56	□□□□□ -1.36
CTNNA1-223	ENST00000520520	IGFL4	Q6B9Z1	124 aa		6.56	□□□□□ -1.36
CTNNA1-223	ENST00000520520		Q6ZS46	218 aa		6.56	□□□□□ -1.36
CTNNA1-223	ENST00000520520	NEGR1	Q7Z3B1	354 aa		6.56	□□□□□ -1.36
CTNNA1-223	ENST00000520520	RNF182	Q8N6D2	247 aa		6.56	□□□□□ -1.36
CTNNA1-223	ENST00000520520	C5orf56	Q8N8D9	126 aa		6.56	□□□□□ -1.36
CTNNA1-223	ENST00000520520	RAB37	Q96AX2	223 aa		6.56	□□□□□ -1.36
CTNNA1-223	ENST00000520520	USMG5	Q96IX5	58 aa		6.56	□□□□□ -1.36
CTNNA1-223	ENST00000520520	MSRB1	Q9NZV6	116 aa		6.56	□□□□□ -1.36
CTNNA1-223	ENST00000520520	TRBV25-1	A0A075B6N4	114 aa		6.55	□□□□□ -1.36
CTNNA1-223	ENST00000520520	TRAV8-2	A0A0B4J237	113 aa		6.55	□□□□□ -1.36
CTNNA1-223	ENST00000520520	IGHV1-69D	A0A0B4J2H0	117 aa		6.55	□□□□□ -1.36
CTNNA1-223	ENST00000520520		H3BVH4	76 aa		6.55	□□□□□ -1.36
CTNNA1-223	ENST00000520520	FXYD7	P58549	80 aa		6.55	□□□□□ -1.36
CTNNA1-223	ENST00000520520	DEFB112	Q30KQ8	113 aa		6.55	□□□□□ -1.36
CTNNA1-223	ENST00000520520	GTSCR1	Q86UQ5	136 aa		6.55	□□□□□ -1.36
CTNNA1-223	ENST00000520520	WFDC3	Q8IUB2	231 aa		6.55	□□□□□ -1.36
CTNNA1-223	ENST00000520520	GLMP	Q8WWB7	406 aa		6.55	□□□□□ -1.36
CTNNA1-223	ENST00000520520	CSTL1	Q9H114	145 aa		6.55	□□□□□ -1.36
CTNNA1-223	ENST00000520520	MRPL35	Q9NZE8	188 aa	Known RBP	6.55	□□□□□ -1.36
CTNNA1-223	ENST00000520520	HHLA3	Q9XRX5	114 aa		6.55	□□□□□ -1.36
CTNNA1-223	ENST00000520520	CHTOP	Q9Y3Y2	248 aa	Known RBP	6.55	□□□□□ -1.36
CTNNA1-223	ENST00000520520	PHLDA3	Q9Y5J5	127 aa		6.55	□□□□□ -1.36
CTNNA1-223	ENST00000520520	VWF	P04275	2813 aa		6.54	□□□□□ -1.36
CTNNA1-223	ENST00000520520	IGHV3-35	A0A0C4DH35	117 aa		6.54	□□□□□ -1.36
CTNNA1-223	ENST00000520520		F8W1H4	67 aa		6.54	□□□□□ -1.36
CTNNA1-223	ENST00000520520		G3V4G9	280 aa		6.54	□□□□□ -1.36
CTNNA1-223	ENST00000520520	TRGV3	P03979	118 aa		6.54	□□□□□ -1.36
CTNNA1-223	ENST00000520520	PPIF	P30405	207 aa	Known RBP	6.54	□□□□□ -1.36
CTNNA1-223	ENST00000520520	SUMO2	P61956	95 aa	Known RBP	6.54	□□□□□ -1.36
CTNNA1-223	ENST00000520520	RPL32	P62910	135 aa	Known RBP	6.54	□□□□□ -1.36
CTNNA1-223	ENST00000520520	TOMM6	Q96B49	74 aa		6.54	□□□□□ -1.36
CTNNA1-223	ENST00000520520	SCGB3A1	Q96QR1	104 aa		6.54	□□□□□ -1.36
CTNNA1-223	ENST00000520520	HIST1H4G	Q99525	98 aa		6.54	□□□□□ -1.36
CTNNA1-223	ENST00000520520	NHP2	Q9NX24	153 aa	Known RBP	6.54	□□□□□ -1.36
CTNNA1-223	ENST00000520520	IGHV3OR16-8	A0A075B7F1	116 aa		6.53	□□□□□ -1.36
CTNNA1-223	ENST00000520520	IGHV3-66	A0A0C4DH42	116 aa		6.53	□□□□□ -1.36
CTNNA1-223	ENST00000520520	MYMX	A0A1B0GTQ4	84 aa		6.53	□□□□□ -1.36
CTNNA1-223	ENST00000520520	EIF4EBP3	O60516	100 aa	Predicted RBP	6.53	□□□□□ -1.36
CTNNA1-223	ENST00000520520	SCGB1A1	P11684	91 aa		6.53	□□□□□ -1.36
CTNNA1-223	ENST00000520520	ID1	P41134	155 aa		6.53	□□□□□ -1.36
CTNNA1-223	ENST00000520520	FXYD2	P54710	66 aa		6.53	□□□□□ -1.36
CTNNA1-223	ENST00000520520	TCTA	P57738	103 aa		6.53	□□□□□ -1.36
CTNNA1-223	ENST00000520520	FOXE3	Q13461	319 aa		6.53	□□□□□ -1.36
CTNNA1-223	ENST00000520520	TM4SF20	Q53R12	229 aa		6.53	□□□□□ -1.36
CTNNA1-223	ENST00000520520	ZNF479	Q96JC4	524 aa		6.53	□□□□□ -1.36
CTNNA1-223	ENST00000520520	PRKDC	P78527	4128 aa	Known RBP	6.52	□□□□□ -1.36
CTNNA1-223	ENST00000520520	IGKV2D-26	A0A0A0MRZ7	120 aa		6.52	□□□□□ -1.37
CTNNA1-223	ENST00000520520		E9PLD3	99 aa		6.52	□□□□□ -1.37
CTNNA1-223	ENST00000520520		G3V318	75 aa		6.52	□□□□□ -1.37
CTNNA1-223	ENST00000520520	MGP	P08493	103 aa		6.52	□□□□□ -1.37
CTNNA1-223	ENST00000520520	PRB4	P10163	310 aa	Predicted RBP	6.52	□□□□□ -1.37
CTNNA1-223	ENST00000520520	C19orf54	Q5BKX5	351 aa		6.52	□□□□□ -1.37
CTNNA1-223	ENST00000520520	APRG1	Q8IVJ8	170 aa		6.52	□□□□□ -1.37
CTNNA1-223	ENST00000520520	C11orf21	Q9P2W6	132 aa		6.52	□□□□□ -1.37
CTNNA1-223	ENST00000520520	CYSLTR1	Q9Y271	337 aa		6.52	□□□□□ -1.37
CTNNA1-223	ENST00000520520	PLXNB1	O43157	2135 aa		6.52	□□□□□ -1.37
CTNNA1-223	ENST00000520520	NXPH4	O95158	308 aa		6.51	□□□□□ -1.37
CTNNA1-223	ENST00000520520	IGHV1-69	P01742	117 aa		6.51	□□□□□ -1.37
CTNNA1-223	ENST00000520520	IGF1	P05019	195 aa		6.51	□□□□□ -1.37
CTNNA1-223	ENST00000520520	GATA1	P15976	413 aa	Predicted RBP	6.51	□□□□□ -1.37
CTNNA1-223	ENST00000520520	KRTAP10-3	P60369	221 aa		6.51	□□□□□ -1.37
CTNNA1-223	ENST00000520520	RRN3P1	Q2M238	152 aa		6.51	□□□□□ -1.37
CTNNA1-223	ENST00000520520	SYT8	Q8NBV8	401 aa		6.51	□□□□□ -1.37
CTNNA1-223	ENST00000520520	TMEM141	Q96I45	108 aa		6.51	□□□□□ -1.37
CTNNA1-223	ENST00000520520	ODF3	Q96PU9	254 aa		6.51	□□□□□ -1.37
CTNNA1-223	ENST00000520520	IGHV3OR16-13	A0A075B7E8	117 aa		6.5	□□□□□ -1.37
CTNNA1-223	ENST00000520520	IGHV3-49	A0A0A0MS15	119 aa		6.5	□□□□□ -1.37
CTNNA1-223	ENST00000520520	IGHV3-74	A0A0B4J1X5	117 aa		6.5	□□□□□ -1.37
CTNNA1-223	ENST00000520520	TRAV26-2	A0A0B4J265	109 aa		6.5	□□□□□ -1.37
CTNNA1-223	ENST00000520520		A0A1B0GWB2	263 aa		6.5	□□□□□ -1.37
CTNNA1-223	ENST00000520520	IGLL5	B9A064	214 aa		6.5	□□□□□ -1.37
CTNNA1-223	ENST00000520520	SAP30	O75446	220 aa		6.5	□□□□□ -1.37
CTNNA1-223	ENST00000520520	PRB2	P02812	416 aa	Predicted RBP	6.5	□□□□□ -1.37
CTNNA1-223	ENST00000520520	RPL24	P83731	157 aa	Known RBP	6.5	□□□□□ -1.37
CTNNA1-223	ENST00000520520	C12orf74	Q32Q52	190 aa		6.5	□□□□□ -1.37
CTNNA1-223	ENST00000520520	HIST2H2BD	Q6DRA6	164 aa		6.5	□□□□□ -1.37
CTNNA1-223	ENST00000520520	C2orf66	Q6UXQ4	117 aa		6.5	□□□□□ -1.37
CTNNA1-223	ENST00000520520	FOXI2	Q6ZQN5	318 aa		6.5	□□□□□ -1.37
CTNNA1-223	ENST00000520520	ZNF575	Q86XF7	245 aa		6.5	□□□□□ -1.37
CTNNA1-223	ENST00000520520	ZFAND2A	Q8N6M9	145 aa		6.5	□□□□□ -1.37
CTNNA1-223	ENST00000520520	NEXN-AS1	Q8NBZ9	246 aa		6.5	□□□□□ -1.37
CTNNA1-223	ENST00000520520	PHLDA1	Q8WV24	401 aa	Predicted RBP	6.5	□□□□□ -1.37
CTNNA1-223	ENST00000520520	AJUBA	Q96IF1	538 aa		6.5	□□□□□ -1.37
CTNNA1-223	ENST00000520520	CITED1	Q99966	193 aa		6.5	□□□□□ -1.37
CTNNA1-223	ENST00000520520	NAA38	Q9BRA0	125 aa	Known RBP	6.5	□□□□□ -1.37
CTNNA1-223	ENST00000520520	ZNF580	Q9UK33	172 aa		6.5	□□□□□ -1.37
CTNNA1-223	ENST00000520520	TRBV7-3	A0A075B6L6	115 aa		6.49	□□□□□ -1.37
CTNNA1-223	ENST00000520520		K7ERJ3	54 aa		6.49	□□□□□ -1.37
CTNNA1-223	ENST00000520520	SOCS3	O14543	225 aa		6.49	□□□□□ -1.37
CTNNA1-223	ENST00000520520	GAS8-AS1	O95177	125 aa		6.49	□□□□□ -1.37
CTNNA1-223	ENST00000520520	IGHV4-59	P01825	116 aa		6.49	□□□□□ -1.37
CTNNA1-223	ENST00000520520	RPL11	P62913	178 aa	Known RBP	6.49	□□□□□ -1.37
CTNNA1-223	ENST00000520520	FAM159A	Q6UWV7	190 aa		6.49	□□□□□ -1.37
CTNNA1-223	ENST00000520520	SCGB1D4	Q6XE38	83 aa		6.49	□□□□□ -1.37
CTNNA1-223	ENST00000520520		Q6YL49	198 aa		6.49	□□□□□ -1.37

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