RNA–Protein interactions for RNA: ENST00000516960.1

RNU6-943P-201, Transcript of RNA, U6 small nuclear 943, pseudogene, humanhuman

BASIC

Gene RNU6-943P, Length 98 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-943P-201ENST00000516960 C10orf82Q8WW14 230 aa2.65□□□□□ -1.99
RNU6-943P-201ENST00000516960 CYSTM1Q9H1C7 97 aa2.65□□□□□ -1.99
RNU6-943P-201ENST00000516960 COL4A4P53420 1690 aaPredicted RBP2.65□□□□□ -1.99
RNU6-943P-201ENST00000516960 ZNF609O15014 1411 aa2.65□□□□□ -1.99
RNU6-943P-201ENST00000516960 ARFGEF3Q5TH69 2177 aa2.64□□□□□ -1.99
RNU6-943P-201ENST00000516960 RBBP6Q7Z6E9 1792 aaKnown RBP2.64□□□□□ -1.99
RNU6-943P-201ENST00000516960 IGKV3D-7A0A0C4DH55 119 aa2.64□□□□□ -1.99
RNU6-943P-201ENST00000516960 IGKV3OR2-268A0A0C4DH90 116 aa2.64□□□□□ -1.99
RNU6-943P-201ENST00000516960 CPSF1Q10570 1443 aaKnown RBP2.64□□□□□ -1.99
RNU6-943P-201ENST00000516960 CITO14578 2027 aa2.64□□□□□ -1.99
RNU6-943P-201ENST00000516960 PTPRDP23468 1912 aa2.64□□□□□ -1.99
RNU6-943P-201ENST00000516960 CTTNBP2Q8WZ74 1663 aa2.63□□□□□ -1.99
RNU6-943P-201ENST00000516960 COL5A1-AS1Q5SY13 56 aa2.63□□□□□ -1.99
RNU6-943P-201ENST00000516960 OBSCN-AS1Q96MR7 158 aa2.63□□□□□ -1.99
RNU6-943P-201ENST00000516960 TNRC6AQ8NDV7 1962 aaKnown RBP2.63□□□□□ -1.99
RNU6-943P-201ENST00000516960 UBE2L5PA0A1B0GUS4 154 aa2.62□□□□□ -1.99
RNU6-943P-201ENST00000516960 TMEM262E9PQX1 116 aa2.62□□□□□ -1.99
RNU6-943P-201ENST00000516960 MPC2O95563 127 aa2.62□□□□□ -1.99
RNU6-943P-201ENST00000516960 ATP5EP56381 51 aaPredicted RBP2.62□□□□□ -1.99
RNU6-943P-201ENST00000516960 GNG2P59768 71 aa2.62□□□□□ -1.99
RNU6-943P-201ENST00000516960 KRTAP12-1P59990 96 aa2.62□□□□□ -1.99
RNU6-943P-201ENST00000516960 UBE2L3P68036 154 aaKnown RBP2.62□□□□□ -1.99
RNU6-943P-201ENST00000516960 CYP2G1PQ6ZSU1 146 aa2.62□□□□□ -1.99
RNU6-943P-201ENST00000516960 SBSPONQ8IVN8 264 aa2.62□□□□□ -1.99
RNU6-943P-201ENST00000516960 LAMB1P07942 1786 aa2.61□□□□□ -1.99
RNU6-943P-201ENST00000516960 CHD3Q12873 2000 aaKnown RBP2.61□□□□□ -1.99
RNU6-943P-201ENST00000516960 TNRC6BQ9UPQ9 1833 aaKnown RBP2.61□□□□□ -1.99
RNU6-943P-201ENST00000516960 TRAV13-2A0A0B4J235 113 aa2.61□□□□□ -1.99
RNU6-943P-201ENST00000516960 SSSCA1O60232 199 aa2.61□□□□□ -1.99
RNU6-943P-201ENST00000516960 DCDP81605 110 aaKnown RBP2.61□□□□□ -1.99
RNU6-943P-201ENST00000516960 C4orf33Q8N1A6 199 aa2.61□□□□□ -1.99
RNU6-943P-201ENST00000516960 DPH3P1Q9H4G8 78 aa2.61□□□□□ -1.99
RNU6-943P-201ENST00000516960 INTS1Q8N201 2190 aaKnown RBP2.61□□□□□ -1.99
RNU6-943P-201ENST00000516960 MUC22E2RYF6 1773 aaPredicted RBP2.61□□□□□ -1.99
RNU6-943P-201ENST00000516960 LOC101927531A0A1B0GV80 90 aa2.6□□□□□ -1.99
RNU6-943P-201ENST00000516960 CCL8P80075 99 aa2.6□□□□□ -1.99
RNU6-943P-201ENST00000516960 KRTAP6-3Q3LI67 103 aa2.6□□□□□ -1.99
RNU6-943P-201ENST00000516960 COMMD6Q7Z4G1 85 aa2.6□□□□□ -1.99
RNU6-943P-201ENST00000516960 AMELYQ99218 206 aa2.6□□□□□ -1.99
RNU6-943P-201ENST00000516960 SNHG12Q9BXW3 62 aa2.6□□□□□ -1.99
RNU6-943P-201ENST00000516960 MYO18AQ92614 2054 aaKnown RBP2.6□□□□□ -1.99
RNU6-943P-201ENST00000516960 EXPH5Q8NEV8 1989 aa2.6□□□□□ -1.99
RNU6-943P-201ENST00000516960 IGKV2-40A0A087WW87 121 aaPredicted RBP2.59□□□□□ -1.99
RNU6-943P-201ENST00000516960 TEX49A0A1B0GTD5 131 aa2.59□□□□□ -1.99
RNU6-943P-201ENST00000516960 IGKV2D-40P01614 121 aaPredicted RBP2.59□□□□□ -1.99
RNU6-943P-201ENST00000516960 FXYD4P59646 89 aa2.59□□□□□ -1.99
RNU6-943P-201ENST00000516960 PP632Q6XCG6 107 aa2.59□□□□□ -1.99
RNU6-943P-201ENST00000516960 ROBO1Q9Y6N7 1651 aa2.59□□□□□ -2
RNU6-943P-201ENST00000516960 C10orf71Q711Q0 1435 aa2.59□□□□□ -2
RNU6-943P-201ENST00000516960 HCG22E2RYF7 251 aa2.58□□□□□ -2
RNU6-943P-201ENST00000516960 DEFB132Q7Z7B7 95 aa2.58□□□□□ -2
RNU6-943P-201ENST00000516960 SCRIBQ14160 1630 aa2.57□□□□□ -2
RNU6-943P-201ENST00000516960 SPHKAPQ2M3C7 1700 aa2.57□□□□□ -2
RNU6-943P-201ENST00000516960 IGKV2-29A2NJV5 120 aaPredicted RBP2.57□□□□□ -2
RNU6-943P-201ENST00000516960 RBAKDNA6NC62 111 aa2.57□□□□□ -2
RNU6-943P-201ENST00000516960 ZNF818PQ6ZRF7 136 aa2.57□□□□□ -2
RNU6-943P-201ENST00000516960 TTC37Q6PGP7 1564 aa2.57□□□□□ -2
RNU6-943P-201ENST00000516960 H3BQ15 152 aa2.56□□□□□ -2
RNU6-943P-201ENST00000516960 SNCAP37840 140 aa2.56□□□□□ -2
RNU6-943P-201ENST00000516960 UBE2D1P51668 147 aa2.56□□□□□ -2
RNU6-943P-201ENST00000516960 XAF1Q6GPH4 301 aa2.56□□□□□ -2
RNU6-943P-201ENST00000516960 PHRF1Q9P1Y6 1649 aaKnown RBP2.56□□□□□ -2
RNU6-943P-201ENST00000516960 COL5A1P20908 1838 aaPredicted RBP2.56□□□□□ -2
RNU6-943P-201ENST00000516960 NBDYA0A0U1RRE5 68 aa2.55□□□□□ -2
RNU6-943P-201ENST00000516960 KDM6BO15054 1643 aa2.55□□□□□ -2
RNU6-943P-201ENST00000516960 SIX6O95475 246 aa2.55□□□□□ -2
RNU6-943P-201ENST00000516960 ZNF142P52746 1687 aaPredicted RBP2.55□□□□□ -2
RNU6-943P-201ENST00000516960 ARHGAP5Q13017 1502 aa2.55□□□□□ -2
RNU6-943P-201ENST00000516960 FXYD3Q14802 87 aa2.55□□□□□ -2
RNU6-943P-201ENST00000516960 CASKIN1Q8WXD9 1431 aa2.55□□□□□ -2
RNU6-943P-201ENST00000516960 AP4S1Q9Y587 144 aa2.55□□□□□ -2
RNU6-943P-201ENST00000516960 SDK1Q7Z5N4 2213 aa2.54□□□□□ -2
RNU6-943P-201ENST00000516960 PCNX2A6NKB5 2137 aa2.54□□□□□ -2
RNU6-943P-201ENST00000516960 SPAG17Q6Q759 2223 aa2.54□□□□□ -2
RNU6-943P-201ENST00000516960 UBA52P62987 128 aaKnown RBP2.53□□□□□ -2
RNU6-943P-201ENST00000516960 C20orf197Q8N268 126 aa2.53□□□□□ -2
RNU6-943P-201ENST00000516960 MYOZ3Q8TDC0 251 aa2.53□□□□□ -2
RNU6-943P-201ENST00000516960 DPY30Q9C005 99 aa2.53□□□□□ -2
RNU6-943P-201ENST00000516960 CYP4F30PQ9H0H9 118 aa2.53□□□□□ -2
RNU6-943P-201ENST00000516960 LINC00312Q9Y6C7 94 aa2.53□□□□□ -2
RNU6-943P-201ENST00000516960 CC2D2AQ9P2K1 1620 aa2.53□□□□□ -2
RNU6-943P-201ENST00000516960 CASP8AP2Q9UKL3 1982 aa2.52□□□□□ -2.01
RNU6-943P-201ENST00000516960 BLMP54132 1417 aaPredicted RBP2.52□□□□□ -2.01
RNU6-943P-201ENST00000516960 SCAPERQ9BY12 1400 aa2.52□□□□□ -2.01
RNU6-943P-201ENST00000516960 AKAP12Q02952 1782 aa2.52□□□□□ -2.01
RNU6-943P-201ENST00000516960 DLEC1Q9Y238 1755 aa2.52□□□□□ -2.01
RNU6-943P-201ENST00000516960 ARAP2Q8WZ64 1704 aa2.52□□□□□ -2.01
RNU6-943P-201ENST00000516960 C5orf56Q8N8D9 126 aa2.52□□□□□ -2.01
RNU6-943P-201ENST00000516960 TET1Q8NFU7 2136 aa2.52□□□□□ -2.01
RNU6-943P-201ENST00000516960 PVALEFA0A1B0GWK0 134 aa2.51□□□□□ -2.01
RNU6-943P-201ENST00000516960 LINC00032P0C843 101 aa2.51□□□□□ -2.01
RNU6-943P-201ENST00000516960 CCL3L1P16619 93 aa2.51□□□□□ -2.01
RNU6-943P-201ENST00000516960 SSBP1Q04837 148 aaKnown RBP2.51□□□□□ -2.01
RNU6-943P-201ENST00000516960 PPP1R1CQ8WVI7 109 aa2.51□□□□□ -2.01
RNU6-943P-201ENST00000516960 LINC00474Q9P2X8 69 aa2.51□□□□□ -2.01
RNU6-943P-201ENST00000516960 TEX14Q8IWB6 1497 aa2.51□□□□□ -2.01
RNU6-943P-201ENST00000516960 RREB1Q92766 1687 aa2.5□□□□□ -2.01
RNU6-943P-201ENST00000516960 KIAA0100Q14667 2235 aaKnown RBP2.5□□□□□ -2.01
RNU6-943P-201ENST00000516960 MT-ATP8P03928 68 aa2.5□□□□□ -2.01
RNU6-943P-201ENST00000516960 C10orf128Q5T292 105 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms