RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 RBFOX3A6NFN3 312 aa12.36□□□□□ -0.43
CLDND1-220ENST00000508902 CIDEAO60543 219 aa12.36□□□□□ -0.43
CLDND1-220ENST00000508902 IGLC6P0CF74 106 aa12.36□□□□□ -0.43
CLDND1-220ENST00000508902 SIVA1O15304 175 aa12.35□□□□□ -0.43
CLDND1-220ENST00000508902 OR5AL1P0C617 328 aa12.35□□□□□ -0.43
CLDND1-220ENST00000508902 TOR2AQ5JU69 321 aa12.35□□□□□ -0.43
CLDND1-220ENST00000508902 Q6ZRN7 208 aaPredicted RBP12.35□□□□□ -0.43
CLDND1-220ENST00000508902 ZFP82Q8N141 532 aa12.35□□□□□ -0.43
CLDND1-220ENST00000508902 SYT8Q8NBV8 401 aa12.35□□□□□ -0.43
CLDND1-220ENST00000508902 SMIM12Q96EX1 92 aa12.35□□□□□ -0.43
CLDND1-220ENST00000508902 TAGLN2P37802 199 aaKnown RBP12.34□□□□□ -0.43
CLDND1-220ENST00000508902 TIRAPP58753 221 aa12.34□□□□□ -0.43
CLDND1-220ENST00000508902 FAM74A4Q5TZK3 123 aa12.34□□□□□ -0.43
CLDND1-220ENST00000508902 PRADC1Q9BSG0 188 aa12.34□□□□□ -0.43
CLDND1-220ENST00000508902 TNFRSF18Q9Y5U5 241 aa12.34□□□□□ -0.43
CLDND1-220ENST00000508902 A0A1W2PPQ1 181 aa12.33□□□□□ -0.44
CLDND1-220ENST00000508902 GAGE12JA6NER3 117 aa12.33□□□□□ -0.44
CLDND1-220ENST00000508902 LINC00315P59091 139 aa12.33□□□□□ -0.44
CLDND1-220ENST00000508902 GAGE1Q13065 139 aa12.33□□□□□ -0.44
CLDND1-220ENST00000508902 GAGE4Q13068 117 aa12.33□□□□□ -0.44
CLDND1-220ENST00000508902 GAGE5Q13069 117 aa12.33□□□□□ -0.44
CLDND1-220ENST00000508902 GAGE13Q4V321 117 aa12.33□□□□□ -0.44
CLDND1-220ENST00000508902 OCC1Q8TAD7 63 aa12.33□□□□□ -0.44
CLDND1-220ENST00000508902 KIF25-AS1Q9Y6Z4 181 aa12.33□□□□□ -0.44
CLDND1-220ENST00000508902 TMEM250H0YL14 139 aa12.32□□□□□ -0.44
CLDND1-220ENST00000508902 TTC32Q5I0X7 151 aa12.32□□□□□ -0.44
CLDND1-220ENST00000508902 OR2D3Q8NGH3 330 aa12.32□□□□□ -0.44
CLDND1-220ENST00000508902 FAM210AQ96ND0 272 aa12.32□□□□□ -0.44
CLDND1-220ENST00000508902 RHODO00212 210 aa12.31□□□□□ -0.44
CLDND1-220ENST00000508902 DNAH10OSP0CZ25 163 aa12.31□□□□□ -0.44
CLDND1-220ENST00000508902 Q8N3U1 123 aa12.31□□□□□ -0.44
CLDND1-220ENST00000508902 NUDT10Q8NFP7 164 aa12.31□□□□□ -0.44
CLDND1-220ENST00000508902 NUDT11Q96G61 164 aa12.31□□□□□ -0.44
CLDND1-220ENST00000508902 RNASE7Q9H1E1 156 aaKnown RBP12.31□□□□□ -0.44
CLDND1-220ENST00000508902 MSRB1Q9NZV6 116 aa12.31□□□□□ -0.44
CLDND1-220ENST00000508902 APOBP04114 4563 aaKnown RBP12.31□□□□□ -0.44
CLDND1-220ENST00000508902 RYR1P21817 5038 aa12.31□□□□□ -0.44
CLDND1-220ENST00000508902 C9JQL5 133 aa12.3□□□□□ -0.44
CLDND1-220ENST00000508902 SRP19P09132 144 aaKnown RBP12.3□□□□□ -0.44
CLDND1-220ENST00000508902 SSTP61278 116 aa12.3□□□□□ -0.44
CLDND1-220ENST00000508902 TEX261Q6UWH6 196 aa12.3□□□□□ -0.44
CLDND1-220ENST00000508902 SRSF3P84103 164 aaKnown RBP12.29□□□□□ -0.44
CLDND1-220ENST00000508902 ATP6V0E2Q8NHE4 81 aa12.29□□□□□ -0.44
CLDND1-220ENST00000508902 P01737 135 aa12.28□□□□□ -0.44
CLDND1-220ENST00000508902 SOHLH1Q5JUK2 328 aa12.28□□□□□ -0.44
CLDND1-220ENST00000508902 SH2D6Q7Z4S9 175 aa12.28□□□□□ -0.44
CLDND1-220ENST00000508902 FER1L6-AS1Q8NA97 138 aa12.28□□□□□ -0.44
CLDND1-220ENST00000508902 GTSF1LQ9H1H1 148 aa12.28□□□□□ -0.44
CLDND1-220ENST00000508902 HSPG2P98160 4391 aa12.28□□□□□ -0.44
CLDND1-220ENST00000508902 LELP1Q5T871 98 aa12.27□□□□□ -0.45
CLDND1-220ENST00000508902 SPANXN1Q5VSR9 72 aa12.27□□□□□ -0.45
CLDND1-220ENST00000508902 DAZAP1Q96EP5 407 aaKnown RBP12.27□□□□□ -0.45
CLDND1-220ENST00000508902 TPPP3Q9BW30 176 aa12.27□□□□□ -0.45
CLDND1-220ENST00000508902 LY96Q9Y6Y9 160 aa12.27□□□□□ -0.45
CLDND1-220ENST00000508902 CTRLP40313 264 aa12.26□□□□□ -0.45
CLDND1-220ENST00000508902 CEBPGP53567 150 aa12.26□□□□□ -0.45
CLDND1-220ENST00000508902 RPS20P60866 119 aaKnown RBP12.26□□□□□ -0.45
CLDND1-220ENST00000508902 LYZL1Q6UWQ5 148 aa12.26□□□□□ -0.45
CLDND1-220ENST00000508902 GTSF1Q8WW33 167 aa12.26□□□□□ -0.45
CLDND1-220ENST00000508902 NDUFS6O75380 124 aaKnown RBP12.25□□□□□ -0.45
CLDND1-220ENST00000508902 LINC01556Q5JQF7 62 aa12.25□□□□□ -0.45
CLDND1-220ENST00000508902 NEXN-AS1Q8NBZ9 246 aa12.25□□□□□ -0.45
CLDND1-220ENST00000508902 EIF5A2Q9GZV4 153 aaKnown RBP12.25□□□□□ -0.45
CLDND1-220ENST00000508902 RPP21Q9H633 154 aaKnown RBP12.25□□□□□ -0.45
CLDND1-220ENST00000508902 IGHV3-38A0A0C4DH36 116 aa12.24□□□□□ -0.45
CLDND1-220ENST00000508902 RAB4BP61018 213 aa12.24□□□□□ -0.45
CLDND1-220ENST00000508902 UBE2D3P61077 147 aa12.24□□□□□ -0.45
CLDND1-220ENST00000508902 UBE2D2P62837 147 aa12.24□□□□□ -0.45
CLDND1-220ENST00000508902 ZNF56Q15929 161 aa12.24□□□□□ -0.45
CLDND1-220ENST00000508902 OR10G8Q8NGN5 311 aa12.24□□□□□ -0.45
CLDND1-220ENST00000508902 CNFNQ9BYD5 112 aa12.24□□□□□ -0.45
CLDND1-220ENST00000508902 BTF3P20290 206 aaKnown RBP12.23□□□□□ -0.45
CLDND1-220ENST00000508902 OR10J3Q5JRS4 329 aa12.23□□□□□ -0.45
CLDND1-220ENST00000508902 LINC01551Q86U37 167 aa12.23□□□□□ -0.45
CLDND1-220ENST00000508902 AP1S3Q96PC3 154 aa12.23□□□□□ -0.45
CLDND1-220ENST00000508902 SMIM7Q9BQ49 75 aa12.23□□□□□ -0.45
CLDND1-220ENST00000508902 TRBV10-1A0A0K0K1A3 114 aa12.22□□□□□ -0.45
CLDND1-220ENST00000508902 EVI2AP22794 236 aa12.22□□□□□ -0.45
CLDND1-220ENST00000508902 KRTAP10-2P60368 255 aa12.22□□□□□ -0.45
CLDND1-220ENST00000508902 FAM231DQ6ZW35 169 aa12.22□□□□□ -0.45
CLDND1-220ENST00000508902 BIN3Q9NQY0 253 aa12.22□□□□□ -0.45
CLDND1-220ENST00000508902 IGHV3-30P01768 117 aa12.21□□□□□ -0.45
CLDND1-220ENST00000508902 IGHV3-33P01772 117 aa12.21□□□□□ -0.45
CLDND1-220ENST00000508902 IGHV3-30-3P0DP02 117 aa12.21□□□□□ -0.45
CLDND1-220ENST00000508902 IGHV3-30-5P0DP03 117 aa12.21□□□□□ -0.45
CLDND1-220ENST00000508902 TRBV7-3A0A075B6L6 115 aa12.2□□□□□ -0.46
CLDND1-220ENST00000508902 CACNG7P62955 275 aa12.2□□□□□ -0.46
CLDND1-220ENST00000508902 TRAV8-6A0A0B4J262 113 aa12.19□□□□□ -0.46
CLDND1-220ENST00000508902 ZNF727A8MUV8 499 aa12.19□□□□□ -0.46
CLDND1-220ENST00000508902 F2Z2F3 143 aa12.19□□□□□ -0.46
CLDND1-220ENST00000508902 M0QY20 66 aa12.19□□□□□ -0.46
CLDND1-220ENST00000508902 NTF3P20783 257 aa12.19□□□□□ -0.46
CLDND1-220ENST00000508902 FOXA3P55318 350 aaPredicted RBP12.19□□□□□ -0.46
CLDND1-220ENST00000508902 SUMO4Q6EEV6 95 aa12.19□□□□□ -0.46
CLDND1-220ENST00000508902 XKRY2A2RUG3 117 aa12.18□□□□□ -0.46
CLDND1-220ENST00000508902 IBA57-AS1B1ANH7 110 aa12.18□□□□□ -0.46
CLDND1-220ENST00000508902 GATCO43716 136 aaKnown RBP12.18□□□□□ -0.46
CLDND1-220ENST00000508902 FUSP35637 526 aaKnown RBP eCLIP12.18□□□□□ -0.46
CLDND1-220ENST00000508902 RPL36AP83881 106 aaKnown RBP12.18□□□□□ -0.46
CLDND1-220ENST00000508902 RPL36ALQ969Q0 106 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms