RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 CHCHD1Q96BP2 118 aaKnown RBP5.88□□□□□ -1.47
TOPBP1-202ENST00000503338 OVOL2Q9BRP0 275 aa5.88□□□□□ -1.47
TOPBP1-202ENST00000503338 TP53TG1Q9Y2A0 90 aa5.88□□□□□ -1.47
TOPBP1-202ENST00000503338 COL6A5A8TX70 2615 aa5.88□□□□□ -1.47
TOPBP1-202ENST00000503338 FBN1P35555 2871 aaKnown RBP5.87□□□□□ -1.47
TOPBP1-202ENST00000503338 TEX48A0A1B0GUV7 120 aa5.87□□□□□ -1.47
TOPBP1-202ENST00000503338 PRSS47A8MTI9 375 aa5.87□□□□□ -1.47
TOPBP1-202ENST00000503338 SPRY2O43597 315 aa5.87□□□□□ -1.47
TOPBP1-202ENST00000503338 MGPP08493 103 aa5.87□□□□□ -1.47
TOPBP1-202ENST00000503338 MIFP14174 115 aa5.87□□□□□ -1.47
TOPBP1-202ENST00000503338 AZU1P20160 251 aa5.87□□□□□ -1.47
TOPBP1-202ENST00000503338 PMCHP20382 165 aa5.87□□□□□ -1.47
TOPBP1-202ENST00000503338 KPRPQ5T749 579 aaPredicted RBP5.87□□□□□ -1.47
TOPBP1-202ENST00000503338 ZFP2Q6ZN57 461 aa5.87□□□□□ -1.47
TOPBP1-202ENST00000503338 RNF183Q96D59 192 aa5.87□□□□□ -1.47
TOPBP1-202ENST00000503338 PACRGQ96M98 296 aaPredicted RBP5.87□□□□□ -1.47
TOPBP1-202ENST00000503338 C20orf78Q9BR46 151 aa5.87□□□□□ -1.47
TOPBP1-202ENST00000503338 MAP1LC3AQ9H492 121 aa5.87□□□□□ -1.47
TOPBP1-202ENST00000503338 EDA2RQ9HAV5 297 aa5.87□□□□□ -1.47
TOPBP1-202ENST00000503338 NXT2Q9NPJ8 142 aaKnown RBP5.87□□□□□ -1.47
TOPBP1-202ENST00000503338 KIF25-AS1Q9Y6Z4 181 aa5.87□□□□□ -1.47
TOPBP1-202ENST00000503338 TENM1Q9UKZ4 2725 aa5.87□□□□□ -1.47
TOPBP1-202ENST00000503338 TRGV1A0A0A0MS02 117 aa5.86□□□□□ -1.47
TOPBP1-202ENST00000503338 TRAV4A0A0B4J268 109 aa5.86□□□□□ -1.47
TOPBP1-202ENST00000503338 LYRM9A8MSI8 78 aa5.86□□□□□ -1.47
TOPBP1-202ENST00000503338 F5H697 171 aa5.86□□□□□ -1.47
TOPBP1-202ENST00000503338 K7EMI3 77 aa5.86□□□□□ -1.47
TOPBP1-202ENST00000503338 RS1O15537 224 aa5.86□□□□□ -1.47
TOPBP1-202ENST00000503338 TNFRSF6BO95407 300 aa5.86□□□□□ -1.47
TOPBP1-202ENST00000503338 CRYGDP07320 174 aa5.86□□□□□ -1.47
TOPBP1-202ENST00000503338 LINC00614P0C842 121 aa5.86□□□□□ -1.47
TOPBP1-202ENST00000503338 ZNF56Q15929 161 aa5.86□□□□□ -1.47
TOPBP1-202ENST00000503338 FA2HQ7L5A8 372 aa5.86□□□□□ -1.47
TOPBP1-202ENST00000503338 PRSS3P2Q8NHM4 247 aa5.86□□□□□ -1.47
TOPBP1-202ENST00000503338 TMEM18Q96B42 140 aa5.86□□□□□ -1.47
TOPBP1-202ENST00000503338 STAB1Q9NY15 2570 aa5.85□□□□□ -1.47
TOPBP1-202ENST00000503338 MUC4Q99102 2169 aa5.85□□□□□ -1.47
TOPBP1-202ENST00000503338 A0A087WWL8 130 aa5.85□□□□□ -1.47
TOPBP1-202ENST00000503338 TCAPO15273 167 aa5.85□□□□□ -1.47
TOPBP1-202ENST00000503338 HSBP1O75506 76 aa5.85□□□□□ -1.47
TOPBP1-202ENST00000503338 SERF1AO75920 110 aa5.85□□□□□ -1.47
TOPBP1-202ENST00000503338 LINC00315P59091 139 aa5.85□□□□□ -1.47
TOPBP1-202ENST00000503338 RPL32P62910 135 aaKnown RBP5.85□□□□□ -1.47
TOPBP1-202ENST00000503338 DEFB135Q30KP9 77 aa5.85□□□□□ -1.47
TOPBP1-202ENST00000503338 FAM74A4Q5TZK3 123 aa5.85□□□□□ -1.47
TOPBP1-202ENST00000503338 CFAP126Q5VTH2 177 aa5.85□□□□□ -1.47
TOPBP1-202ENST00000503338 HIST3H2BBQ8N257 126 aa5.85□□□□□ -1.47
TOPBP1-202ENST00000503338 OR4C5Q8NGB2 326 aa5.85□□□□□ -1.47
TOPBP1-202ENST00000503338 OR11H2Q8NH07 326 aa5.85□□□□□ -1.47
TOPBP1-202ENST00000503338 C18orf15Q96N68 181 aa5.85□□□□□ -1.47
TOPBP1-202ENST00000503338 SAMD10Q9BYL1 202 aa5.85□□□□□ -1.47
TOPBP1-202ENST00000503338 NOP10Q9NPE3 64 aaKnown RBP5.85□□□□□ -1.47
TOPBP1-202ENST00000503338 AP5S1Q9NUS5 200 aa5.85□□□□□ -1.47
TOPBP1-202ENST00000503338 MRPL16Q9NX20 251 aaKnown RBP5.85□□□□□ -1.47
TOPBP1-202ENST00000503338 X6R8D5 127 aa5.85□□□□□ -1.47
TOPBP1-202ENST00000503338 TRGV2A0A075B6R0 118 aa5.84□□□□□ -1.47
TOPBP1-202ENST00000503338 TRBV6-5A0A0K0K1A5 114 aa5.84□□□□□ -1.47
TOPBP1-202ENST00000503338 LOC105371267A0A1B0GV96 52 aa5.84□□□□□ -1.47
TOPBP1-202ENST00000503338 PLAC8L1A1L4L8 177 aa5.84□□□□□ -1.47
TOPBP1-202ENST00000503338 NCR2O95944 276 aa5.84□□□□□ -1.47
TOPBP1-202ENST00000503338 NPYP01303 97 aa5.84□□□□□ -1.47
TOPBP1-202ENST00000503338 PRM2P04554 102 aa5.84□□□□□ -1.47
TOPBP1-202ENST00000503338 G0S2P27469 103 aa5.84□□□□□ -1.47
TOPBP1-202ENST00000503338 SUMO2P61956 95 aaKnown RBP5.84□□□□□ -1.47
TOPBP1-202ENST00000503338 IQCJQ1A5X6 159 aa5.84□□□□□ -1.47
TOPBP1-202ENST00000503338 SUMO4Q6EEV6 95 aa5.84□□□□□ -1.47
TOPBP1-202ENST00000503338 UFSP1Q6NVU6 142 aa5.84□□□□□ -1.47
TOPBP1-202ENST00000503338 NIT1Q86X76 327 aa5.84□□□□□ -1.47
TOPBP1-202ENST00000503338 NRACQ8N912 160 aa5.84□□□□□ -1.47
TOPBP1-202ENST00000503338 JPT2Q9H910 190 aa5.84□□□□□ -1.47
TOPBP1-202ENST00000503338 ST20Q9HBF5 79 aa5.84□□□□□ -1.47
TOPBP1-202ENST00000503338 TRAV26-2A0A0B4J265 109 aa5.83□□□□□ -1.48
TOPBP1-202ENST00000503338 TRBV10-1A0A0K0K1A3 114 aa5.83□□□□□ -1.48
TOPBP1-202ENST00000503338 LINC01546A6NGU7 62 aa5.83□□□□□ -1.48
TOPBP1-202ENST00000503338 LINC01549A6NIU2 74 aa5.83□□□□□ -1.48
TOPBP1-202ENST00000503338 SMKR1H3BMG3 65 aa5.83□□□□□ -1.48
TOPBP1-202ENST00000503338 M0QY20 66 aa5.83□□□□□ -1.48
TOPBP1-202ENST00000503338 IGHV3-53P01767 116 aa5.83□□□□□ -1.48
TOPBP1-202ENST00000503338 AMTP48728 403 aa5.83□□□□□ -1.48
TOPBP1-202ENST00000503338 RNASEKQ6P5S7 137 aaKnown RBP5.83□□□□□ -1.48
TOPBP1-202ENST00000503338 LINC00612Q8N6U2 182 aa5.83□□□□□ -1.48
TOPBP1-202ENST00000503338 Q8N8P6 123 aa5.83□□□□□ -1.48
TOPBP1-202ENST00000503338 DNAJC30Q96LL9 226 aa5.83□□□□□ -1.48
TOPBP1-202ENST00000503338 NIT2Q9NQR4 276 aa5.83□□□□□ -1.48
TOPBP1-202ENST00000503338 TRRAPQ9Y4A5 3859 aa5.82□□□□□ -1.48
TOPBP1-202ENST00000503338 LOC389332A0A1B0GUA5 103 aa5.82□□□□□ -1.48
TOPBP1-202ENST00000503338 VCYO14598 125 aa5.82□□□□□ -1.48
TOPBP1-202ENST00000503338 IFI27P40305 119 aaPredicted RBP5.82□□□□□ -1.48
TOPBP1-202ENST00000503338 ORMDL2Q53FV1 153 aa5.82□□□□□ -1.48
TOPBP1-202ENST00000503338 Q6ZTI0 123 aa5.82□□□□□ -1.48
TOPBP1-202ENST00000503338 Q8NAQ8 132 aa5.82□□□□□ -1.48
TOPBP1-202ENST00000503338 KIR2DL4Q99706 377 aa5.82□□□□□ -1.48
TOPBP1-202ENST00000503338 HIST1H2BLQ99880 126 aa5.82□□□□□ -1.48
TOPBP1-202ENST00000503338 SMIM2Q9BVW6 85 aa5.82□□□□□ -1.48
TOPBP1-202ENST00000503338 IGHV4-28A0A0C4DH34 117 aa5.81□□□□□ -1.48
TOPBP1-202ENST00000503338 TRBV6-4A0A1B0GX49 114 aa5.81□□□□□ -1.48
TOPBP1-202ENST00000503338 GAGE12BA1L429 117 aa5.81□□□□□ -1.48
TOPBP1-202ENST00000503338 GAGE7O76087 117 aa5.81□□□□□ -1.48
TOPBP1-202ENST00000503338 GAGE12FP0CL80 117 aa5.81□□□□□ -1.48
TOPBP1-202ENST00000503338 GAGE12GP0CL81 117 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms