RNA–Protein interactions for RNA: ENST00000498678.5

HOXB3-212, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXB3, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-212ENST00000498678 A0A1B0GV72 72 aa19.16■□□□□ 0.66
HOXB3-212ENST00000498678 RNF185Q96GF1 192 aa19.16■□□□□ 0.66
HOXB3-212ENST00000498678 U3KQK5 164 aa19.16■□□□□ 0.66
HOXB3-212ENST00000498678 IGHV1OR15-1A0A075B7D0 117 aa19.15■□□□□ 0.66
HOXB3-212ENST00000498678 CMC4P56277 68 aaPredicted RBP19.15■□□□□ 0.66
HOXB3-212ENST00000498678 SAMD10Q9BYL1 202 aa19.15■□□□□ 0.66
HOXB3-212ENST00000498678 PHLDA3Q9Y5J5 127 aa19.15■□□□□ 0.66
HOXB3-212ENST00000498678 EVI2AP22794 236 aa19.15■□□□□ 0.66
HOXB3-212ENST00000498678 Q6ZVH6 145 aa19.15■□□□□ 0.66
HOXB3-212ENST00000498678 D6R8Y8 96 aa19.14■□□□□ 0.65
HOXB3-212ENST00000498678 G3V4G9 280 aa19.14■□□□□ 0.65
HOXB3-212ENST00000498678 STHQ8IWL8 128 aa19.13■□□□□ 0.65
HOXB3-212ENST00000498678 GAGE12BA1L429 117 aa19.13■□□□□ 0.65
HOXB3-212ENST00000498678 M0R381 172 aa19.13■□□□□ 0.65
HOXB3-212ENST00000498678 Q8N1Y9 231 aa19.13■□□□□ 0.65
HOXB3-212ENST00000498678 SPATA3Q8NHX4 192 aa19.13■□□□□ 0.65
HOXB3-212ENST00000498678 FAM110AQ9BQ89 295 aa19.13■□□□□ 0.65
HOXB3-212ENST00000498678 PMCHL1Q16048 86 aa19.12■□□□□ 0.65
HOXB3-212ENST00000498678 TENM1Q9UKZ4 2725 aa19.12■□□□□ 0.65
HOXB3-212ENST00000498678 IGHV3-16A0A0C4DH30 117 aa19.12■□□□□ 0.65
HOXB3-212ENST00000498678 TRPT1Q86TN4 253 aaKnown RBP19.12■□□□□ 0.65
HOXB3-212ENST00000498678 ORMDL3Q8N138 153 aa19.12■□□□□ 0.65
HOXB3-212ENST00000498678 URB1-AS1Q96HZ7 61 aa19.12■□□□□ 0.65
HOXB3-212ENST00000498678 C19orf73Q9NVV2 129 aa19.12■□□□□ 0.65
HOXB3-212ENST00000498678 RIPPLY3P57055 190 aa19.1■□□□□ 0.65
HOXB3-212ENST00000498678 MDFICQ9P1T7 246 aa19.1■□□□□ 0.65
HOXB3-212ENST00000498678 KRTDAPP60985 99 aa19.1■□□□□ 0.65
HOXB3-212ENST00000498678 PRELID3AQ96N28 172 aa19.1■□□□□ 0.65
HOXB3-212ENST00000498678 SMKR1H3BMG3 65 aa19.09■□□□□ 0.65
HOXB3-212ENST00000498678 NXPH4O95158 308 aa19.09■□□□□ 0.65
HOXB3-212ENST00000498678 CKS2P33552 79 aa19.09■□□□□ 0.65
HOXB3-212ENST00000498678 KRTAP24-1Q3LI83 254 aa19.09■□□□□ 0.65
HOXB3-212ENST00000498678 C9orf85Q96MD7 179 aa19.09■□□□□ 0.65
HOXB3-212ENST00000498678 RNASEKQ6P5S7 137 aaKnown RBP19.09■□□□□ 0.65
HOXB3-212ENST00000498678 TAX1BP3O14907 124 aa19.08■□□□□ 0.65
HOXB3-212ENST00000498678 WFDC10AQ9H1F0 79 aa19.08■□□□□ 0.64
HOXB3-212ENST00000498678 ATRQ13535 2644 aa19.07■□□□□ 0.64
HOXB3-212ENST00000498678 NCR2O95944 276 aa19.07■□□□□ 0.64
HOXB3-212ENST00000498678 INSL3P51460 131 aa19.07■□□□□ 0.64
HOXB3-212ENST00000498678 TEP1Q99973 2627 aaKnown RBP19.07■□□□□ 0.64
HOXB3-212ENST00000498678 MUC4Q99102 2169 aa19.07■□□□□ 0.64
HOXB3-212ENST00000498678 GAS8-AS1O95177 125 aa19.06■□□□□ 0.64
HOXB3-212ENST00000498678 FAM19A2Q8N3H0 131 aa19.06■□□□□ 0.64
HOXB3-212ENST00000498678 TRGV11A0A075B6L2 103 aa19.05■□□□□ 0.64
HOXB3-212ENST00000498678 PMCHP20382 165 aa19.05■□□□□ 0.64
HOXB3-212ENST00000498678 AMTP48728 403 aa19.05■□□□□ 0.64
HOXB3-212ENST00000498678 C9orf66Q5T8R8 295 aa19.05■□□□□ 0.64
HOXB3-212ENST00000498678 DEFB125Q8N687 156 aa19.05■□□□□ 0.64
HOXB3-212ENST00000498678 HSBP1O75506 76 aa19.05■□□□□ 0.64
HOXB3-212ENST00000498678 INSP01308 110 aa19.05■□□□□ 0.64
HOXB3-212ENST00000498678 CHCHD1Q96BP2 118 aaKnown RBP19.05■□□□□ 0.64
HOXB3-212ENST00000498678 NPYP01303 97 aa19.04■□□□□ 0.64
HOXB3-212ENST00000498678 C14orf178Q8N769 122 aaPredicted RBP19.04■□□□□ 0.64
HOXB3-212ENST00000498678 XCL2Q9UBD3 114 aa19.04■□□□□ 0.64
HOXB3-212ENST00000498678 HTN1P15515 57 aa19.03■□□□□ 0.64
HOXB3-212ENST00000498678 AMMECR1LQ6DCA0 310 aa19.03■□□□□ 0.64
HOXB3-212ENST00000498678 DPH3P1Q9H4G8 78 aa19.03■□□□□ 0.64
HOXB3-212ENST00000498678 AP1S3Q96PC3 154 aa19.02■□□□□ 0.64
HOXB3-212ENST00000498678 TRAV9-2A0A087WT02 112 aa19.02■□□□□ 0.63
HOXB3-212ENST00000498678 PRM2P04554 102 aa19.02■□□□□ 0.63
HOXB3-212ENST00000498678 LINC00467Q9BRT7 94 aa19.02■□□□□ 0.63
HOXB3-212ENST00000498678 GATA1P15976 413 aaPredicted RBP19.01■□□□□ 0.63
HOXB3-212ENST00000498678 LINC01587Q99440 93 aa19.01■□□□□ 0.63
HOXB3-212ENST00000498678 PRSS3P2Q8NHM4 247 aa19■□□□□ 0.63
HOXB3-212ENST00000498678 VWFP04275 2813 aa19■□□□□ 0.63
HOXB3-212ENST00000498678 TRAV26-2A0A0B4J265 109 aa19■□□□□ 0.63
HOXB3-212ENST00000498678 LOC389332A0A1B0GUA5 103 aa19■□□□□ 0.63
HOXB3-212ENST00000498678 IFI27P40305 119 aaPredicted RBP19■□□□□ 0.63
HOXB3-212ENST00000498678 PRIMA1Q86XR5 153 aa19■□□□□ 0.63
HOXB3-212ENST00000498678 JPT2Q9H910 190 aa18.99■□□□□ 0.63
HOXB3-212ENST00000498678 KIF25-AS1Q9Y6Z4 181 aa18.99■□□□□ 0.63
HOXB3-212ENST00000498678 TNFRSF6BO95407 300 aa18.99■□□□□ 0.63
HOXB3-212ENST00000498678 SMIM17P0DL12 118 aa18.99■□□□□ 0.63
HOXB3-212ENST00000498678 WFDC9Q8NEX5 89 aa18.99■□□□□ 0.63
HOXB3-212ENST00000498678 C12orf54Q6X4T0 127 aa18.98■□□□□ 0.63
HOXB3-212ENST00000498678 C1orf158Q8N1D5 194 aa18.98■□□□□ 0.63
HOXB3-212ENST00000498678 MRAP2Q96G30 205 aa18.98■□□□□ 0.63
HOXB3-212ENST00000498678 GIG44P09565 113 aaPredicted RBP18.98■□□□□ 0.63
HOXB3-212ENST00000498678 SYT8Q8NBV8 401 aa18.98■□□□□ 0.63
HOXB3-212ENST00000498678 C3orf79P0CE67 100 aa18.97■□□□□ 0.63
HOXB3-212ENST00000498678 NRACQ8N912 160 aa18.97■□□□□ 0.63
HOXB3-212ENST00000498678 ZNF747Q9BV97 191 aa18.97■□□□□ 0.63
HOXB3-212ENST00000498678 RPL35AP18077 110 aaKnown RBP18.96■□□□□ 0.63
HOXB3-212ENST00000498678 LINC00315P59091 139 aa18.96■□□□□ 0.63
HOXB3-212ENST00000498678 FA2HQ7L5A8 372 aa18.96■□□□□ 0.63
HOXB3-212ENST00000498678 IGHV1-24A0A0C4DH33 117 aa18.96■□□□□ 0.63
HOXB3-212ENST00000498678 AP5S1Q9NUS5 200 aa18.96■□□□□ 0.63
HOXB3-212ENST00000498678 GTF2H5Q6ZYL4 71 aa18.95■□□□□ 0.62
HOXB3-212ENST00000498678 POM121L12Q8N7R1 296 aa18.95■□□□□ 0.62
HOXB3-212ENST00000498678 MCRIP2Q9BUT9 160 aaKnown RBP18.95■□□□□ 0.62
HOXB3-212ENST00000498678 MAP1LC3AQ9H492 121 aa18.95■□□□□ 0.62
HOXB3-212ENST00000498678 MGPP08493 103 aa18.95■□□□□ 0.62
HOXB3-212ENST00000498678 ZNF876PQ49A33 203 aa18.94■□□□□ 0.62
HOXB3-212ENST00000498678 GTSCR1Q86UQ5 136 aa18.94■□□□□ 0.62
HOXB3-212ENST00000498678 BVES-AS1Q5T3Y7 98 aa18.93■□□□□ 0.62
HOXB3-212ENST00000498678 C11orf72Q8NBR9 251 aa18.93■□□□□ 0.62
HOXB3-212ENST00000498678 A0A087WWL8 130 aa18.93■□□□□ 0.62
HOXB3-212ENST00000498678 ZNF415Q09FC8 603 aa18.93■□□□□ 0.62
HOXB3-212ENST00000498678 NEGR1Q7Z3B1 354 aa18.92■□□□□ 0.62
HOXB3-212ENST00000498678 NOTCH3Q9UM47 2321 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms