RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 V9GYV3 84 aa11.15□□□□□ -0.62
HDAC7-224ENST00000488927 IGHV3-73A0A0B4J1V6 119 aa11.14□□□□□ -0.63
HDAC7-224ENST00000488927 MUC21A0A0G2JKD1 596 aa11.14□□□□□ -0.63
HDAC7-224ENST00000488927 MUC21A0A140T8X8 626 aa11.14□□□□□ -0.63
HDAC7-224ENST00000488927 LCE6AA0A183 80 aa11.14□□□□□ -0.63
HDAC7-224ENST00000488927 F8W036 122 aa11.14□□□□□ -0.63
HDAC7-224ENST00000488927 PPP1R2P9O14990 202 aa11.14□□□□□ -0.63
HDAC7-224ENST00000488927 CRYGDP07320 174 aa11.14□□□□□ -0.63
HDAC7-224ENST00000488927 TRGC1P0CF51 173 aa11.14□□□□□ -0.63
HDAC7-224ENST00000488927 SMIM17P0DL12 118 aa11.14□□□□□ -0.63
HDAC7-224ENST00000488927 RHOHQ15669 191 aa11.14□□□□□ -0.63
HDAC7-224ENST00000488927 MRPL23Q16540 153 aaKnown RBP11.14□□□□□ -0.63
HDAC7-224ENST00000488927 FAM74A4Q5TZK3 123 aa11.14□□□□□ -0.63
HDAC7-224ENST00000488927 GTSF1Q8WW33 167 aa11.14□□□□□ -0.63
HDAC7-224ENST00000488927 BORCS7Q96B45 105 aa11.14□□□□□ -0.63
HDAC7-224ENST00000488927 JPT2Q9H910 190 aa11.14□□□□□ -0.63
HDAC7-224ENST00000488927 A0A087WWL8 130 aa11.13□□□□□ -0.63
HDAC7-224ENST00000488927 SH2D6Q7Z4S9 175 aa11.13□□□□□ -0.63
HDAC7-224ENST00000488927 SLC25A29Q8N8R3 303 aa11.13□□□□□ -0.63
HDAC7-224ENST00000488927 SEC11CQ9BY50 192 aa11.13□□□□□ -0.63
HDAC7-224ENST00000488927 SAMD10Q9BYL1 202 aa11.13□□□□□ -0.63
HDAC7-224ENST00000488927 LYSTQ99698 3801 aa11.12□□□□□ -0.63
HDAC7-224ENST00000488927 HIGD1CA8MV81 97 aa11.12□□□□□ -0.63
HDAC7-224ENST00000488927 LY6G6CO95867 125 aa11.12□□□□□ -0.63
HDAC7-224ENST00000488927 GYPEP15421 78 aa11.12□□□□□ -0.63
HDAC7-224ENST00000488927 NTF3P20783 257 aa11.12□□□□□ -0.63
HDAC7-224ENST00000488927 CCL18P55774 89 aa11.12□□□□□ -0.63
HDAC7-224ENST00000488927 SSTP61278 116 aa11.12□□□□□ -0.63
HDAC7-224ENST00000488927 RNF212Q495C1 297 aa11.12□□□□□ -0.63
HDAC7-224ENST00000488927 ALMS1Q8TCU4 4167 aa11.11□□□□□ -0.63
HDAC7-224ENST00000488927 A0A096LPF7 62 aa11.11□□□□□ -0.63
HDAC7-224ENST00000488927 K7EQD1 137 aa11.11□□□□□ -0.63
HDAC7-224ENST00000488927 MT-ND4LP03901 98 aa11.11□□□□□ -0.63
HDAC7-224ENST00000488927 SRIP30626 198 aa11.11□□□□□ -0.63
HDAC7-224ENST00000488927 RAB4BP61018 213 aa11.11□□□□□ -0.63
HDAC7-224ENST00000488927 TWIST1Q15672 202 aa11.11□□□□□ -0.63
HDAC7-224ENST00000488927 SMIM15Q7Z3B0 74 aa11.11□□□□□ -0.63
HDAC7-224ENST00000488927 UBE2DNLQ8IWF7 75 aa11.11□□□□□ -0.63
HDAC7-224ENST00000488927 C14orf178Q8N769 122 aaPredicted RBP11.11□□□□□ -0.63
HDAC7-224ENST00000488927 ANAPC16Q96DE5 110 aa11.11□□□□□ -0.63
HDAC7-224ENST00000488927 PGLYRP4Q96LB8 373 aa11.11□□□□□ -0.63
HDAC7-224ENST00000488927 NAT8BQ9UHF3 227 aa11.11□□□□□ -0.63
HDAC7-224ENST00000488927 FAM3BP58499 235 aaPredicted RBP11.1□□□□□ -0.63
HDAC7-224ENST00000488927 MSRB1Q9NZV6 116 aa11.1□□□□□ -0.63
HDAC7-224ENST00000488927 A0A1B0GUT8 65 aa11.09□□□□□ -0.63
HDAC7-224ENST00000488927 SMIM27A0A1W2PRY6 76 aa11.09□□□□□ -0.63
HDAC7-224ENST00000488927 ADCYAP1P18509 176 aa11.09□□□□□ -0.63
HDAC7-224ENST00000488927 ZNF56Q15929 161 aa11.09□□□□□ -0.63
HDAC7-224ENST00000488927 NEGR1Q7Z3B1 354 aa11.09□□□□□ -0.63
HDAC7-224ENST00000488927 DPH3P1Q9H4G8 78 aa11.09□□□□□ -0.63
HDAC7-224ENST00000488927 KIF25-AS1Q9Y6Z4 181 aa11.09□□□□□ -0.63
HDAC7-224ENST00000488927 KMT2CQ8NEZ4 4911 aaKnown RBP11.08□□□□□ -0.64
HDAC7-224ENST00000488927 TRBV10-1A0A0K0K1A3 114 aa11.08□□□□□ -0.64
HDAC7-224ENST00000488927 F5H697 171 aa11.08□□□□□ -0.64
HDAC7-224ENST00000488927 Q6ZSN1 163 aa11.08□□□□□ -0.64
HDAC7-224ENST00000488927 NACAE9PAV3 2078 aa11.07□□□□□ -0.64
HDAC7-224ENST00000488927 EVI2AP22794 236 aa11.07□□□□□ -0.64
HDAC7-224ENST00000488927 RIGQ13278 110 aa11.07□□□□□ -0.64
HDAC7-224ENST00000488927 C10orf91Q5T1B1 145 aa11.07□□□□□ -0.64
HDAC7-224ENST00000488927 NUP35Q8NFH5 326 aa11.07□□□□□ -0.64
HDAC7-224ENST00000488927 DNAH1Q9P2D7 4330 aa11.07□□□□□ -0.64
HDAC7-224ENST00000488927 H7C1H1 209 aa11.06□□□□□ -0.64
HDAC7-224ENST00000488927 LOC100131303A0A0U1RQF7 123 aa11.05□□□□□ -0.64
HDAC7-224ENST00000488927 A0A1B0GW15 77 aa11.05□□□□□ -0.64
HDAC7-224ENST00000488927 MGPP08493 103 aa11.05□□□□□ -0.64
HDAC7-224ENST00000488927 LINC00315P59091 139 aa11.05□□□□□ -0.64
HDAC7-224ENST00000488927 ESRGQ1W209 222 aa11.05□□□□□ -0.64
HDAC7-224ENST00000488927 CARHSP1Q9Y2V2 147 aaKnown RBP11.05□□□□□ -0.64
HDAC7-224ENST00000488927 TIRAPP58753 221 aa11.04□□□□□ -0.64
HDAC7-224ENST00000488927 RPL36AP83881 106 aaKnown RBP11.04□□□□□ -0.64
HDAC7-224ENST00000488927 NDUFA5Q16718 116 aa11.04□□□□□ -0.64
HDAC7-224ENST00000488927 LYPD5Q6UWN5 251 aa11.04□□□□□ -0.64
HDAC7-224ENST00000488927 RPL36ALQ969Q0 106 aaKnown RBP11.04□□□□□ -0.64
HDAC7-224ENST00000488927 CTDSP1Q9GZU7 261 aa11.04□□□□□ -0.64
HDAC7-224ENST00000488927 MRPS16Q9Y3D3 137 aaKnown RBP11.04□□□□□ -0.64
HDAC7-224ENST00000488927 LINC00588Q9Y4M8 146 aa11.04□□□□□ -0.64
HDAC7-224ENST00000488927 SACSQ9NZJ4 4579 aa11.03□□□□□ -0.64
HDAC7-224ENST00000488927 TRBV7-3A0A075B6L6 115 aa11.03□□□□□ -0.64
HDAC7-224ENST00000488927 GAGE12JA6NER3 117 aa11.03□□□□□ -0.64
HDAC7-224ENST00000488927 S100A8P05109 93 aa11.03□□□□□ -0.64
HDAC7-224ENST00000488927 LINC00694P0DN24 101 aa11.03□□□□□ -0.64
HDAC7-224ENST00000488927 GAGE1Q13065 139 aa11.03□□□□□ -0.64
HDAC7-224ENST00000488927 GAGE4Q13068 117 aa11.03□□□□□ -0.64
HDAC7-224ENST00000488927 GAGE5Q13069 117 aa11.03□□□□□ -0.64
HDAC7-224ENST00000488927 GAGE13Q4V321 117 aa11.03□□□□□ -0.64
HDAC7-224ENST00000488927 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.03□□□□□ -0.64
HDAC7-224ENST00000488927 ATP6V0E2Q8NHE4 81 aa11.03□□□□□ -0.64
HDAC7-224ENST00000488927 FRZBQ92765 325 aa11.03□□□□□ -0.64
HDAC7-224ENST00000488927 UPK3BQ9BT76 320 aa11.03□□□□□ -0.64
HDAC7-224ENST00000488927 TMEM191AQ9H0A3 160 aa11.03□□□□□ -0.64
HDAC7-224ENST00000488927 VPS13DQ5THJ4 4388 aa11.02□□□□□ -0.65
HDAC7-224ENST00000488927 DNAJC30Q96LL9 226 aa11.02□□□□□ -0.65
HDAC7-224ENST00000488927 IMMP2LQ96T52 175 aa11.02□□□□□ -0.65
HDAC7-224ENST00000488927 GTSF1LQ9H1H1 148 aa11.02□□□□□ -0.65
HDAC7-224ENST00000488927 M0QY20 66 aa11.01□□□□□ -0.65
HDAC7-224ENST00000488927 RHEBQ15382 184 aa11.01□□□□□ -0.65
HDAC7-224ENST00000488927 SUMO4Q6EEV6 95 aa11.01□□□□□ -0.65
HDAC7-224ENST00000488927 ATP5L2Q7Z4Y8 100 aa11.01□□□□□ -0.65
HDAC7-224ENST00000488927 ZNRF2Q8NHG8 242 aa11.01□□□□□ -0.65
HDAC7-224ENST00000488927 HBBP68871 147 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms