RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 ZNF324O75467 553 aaPredicted RBP4.58□□□□□ -1.68
TMEM39A-209ENST00000486235 LINC00869P0C866 280 aa4.58□□□□□ -1.68
TMEM39A-209ENST00000486235 NPY1RP25929 384 aa4.58□□□□□ -1.68
TMEM39A-209ENST00000486235 GCHFRP30047 84 aa4.58□□□□□ -1.68
TMEM39A-209ENST00000486235 CTRLP40313 264 aa4.58□□□□□ -1.68
TMEM39A-209ENST00000486235 GNG4P50150 75 aa4.58□□□□□ -1.68
TMEM39A-209ENST00000486235 HNRNPA3P51991 378 aaKnown RBP4.58□□□□□ -1.68
TMEM39A-209ENST00000486235 EMP1P54849 157 aa4.58□□□□□ -1.68
TMEM39A-209ENST00000486235 COTL1Q14019 142 aa4.58□□□□□ -1.68
TMEM39A-209ENST00000486235 MORN3Q6PF18 240 aaPredicted RBP4.58□□□□□ -1.68
TMEM39A-209ENST00000486235 ENY2Q9NPA8 101 aa4.58□□□□□ -1.68
TMEM39A-209ENST00000486235 TMEM14BQ9NUH8 114 aa4.58□□□□□ -1.68
TMEM39A-209ENST00000486235 MDFICQ9P1T7 246 aa4.58□□□□□ -1.68
TMEM39A-209ENST00000486235 LAMTOR2Q9Y2Q5 125 aa4.58□□□□□ -1.68
TMEM39A-209ENST00000486235 RFNGQ9Y644 331 aa4.58□□□□□ -1.68
TMEM39A-209ENST00000486235 DNAH5Q8TE73 4624 aa4.58□□□□□ -1.68
TMEM39A-209ENST00000486235 HERC1Q15751 4861 aa4.58□□□□□ -1.68
TMEM39A-209ENST00000486235 APOBP04114 4563 aaKnown RBP4.58□□□□□ -1.68
TMEM39A-209ENST00000486235 TRAV2A0A0B4J234 112 aa4.57□□□□□ -1.68
TMEM39A-209ENST00000486235 FAM231BA6NCW3 169 aa4.57□□□□□ -1.68
TMEM39A-209ENST00000486235 HELTA6NFD8 242 aa4.57□□□□□ -1.68
TMEM39A-209ENST00000486235 SNURFLB1AK76 121 aa4.57□□□□□ -1.68
TMEM39A-209ENST00000486235 K7EQG2 157 aa4.57□□□□□ -1.68
TMEM39A-209ENST00000486235 SERF1AO75920 110 aa4.57□□□□□ -1.68
TMEM39A-209ENST00000486235 CDK2AP2O75956 126 aa4.57□□□□□ -1.68
TMEM39A-209ENST00000486235 OR5AL1P0C617 328 aa4.57□□□□□ -1.68
TMEM39A-209ENST00000486235 ARL14EPLP0DKL9 152 aa4.57□□□□□ -1.68
TMEM39A-209ENST00000486235 IGLC2P0DOY2 106 aa4.57□□□□□ -1.68
TMEM39A-209ENST00000486235 IGLC3P0DOY3 106 aa4.57□□□□□ -1.68
TMEM39A-209ENST00000486235 HTN3P15516 51 aa4.57□□□□□ -1.68
TMEM39A-209ENST00000486235 NPPCP23582 126 aa4.57□□□□□ -1.68
TMEM39A-209ENST00000486235 G0S2P27469 103 aa4.57□□□□□ -1.68
TMEM39A-209ENST00000486235 G6PCP35575 357 aa4.57□□□□□ -1.68
TMEM39A-209ENST00000486235 CDKN1BP46527 198 aa4.57□□□□□ -1.68
TMEM39A-209ENST00000486235 UBE2G2P60604 165 aa4.57□□□□□ -1.68
TMEM39A-209ENST00000486235 OR5I1Q13606 314 aa4.57□□□□□ -1.68
TMEM39A-209ENST00000486235 TMEM256Q8N2U0 113 aa4.57□□□□□ -1.68
TMEM39A-209ENST00000486235 CSNK1G2-AS1Q8NCQ2 148 aa4.57□□□□□ -1.68
TMEM39A-209ENST00000486235 PMCHL2Q9BQD1 86 aa4.57□□□□□ -1.68
TMEM39A-209ENST00000486235 ST20Q9HBF5 79 aa4.57□□□□□ -1.68
TMEM39A-209ENST00000486235 SCRT2Q9NQ03 307 aa4.57□□□□□ -1.68
TMEM39A-209ENST00000486235 ZNF331Q9NQX6 463 aaPredicted RBP4.57□□□□□ -1.68
TMEM39A-209ENST00000486235 MSRB1Q9NZV6 116 aa4.57□□□□□ -1.68
TMEM39A-209ENST00000486235 XCL2Q9UBD3 114 aa4.57□□□□□ -1.68
TMEM39A-209ENST00000486235 PRNDQ9UKY0 176 aa4.57□□□□□ -1.68
TMEM39A-209ENST00000486235 DMBT1Q9UGM3 2413 aaPredicted RBP4.56□□□□□ -1.68
TMEM39A-209ENST00000486235 TRAV30A0A087WSZ9 112 aa4.56□□□□□ -1.68
TMEM39A-209ENST00000486235 TRAV9-2A0A087WT02 112 aa4.56□□□□□ -1.68
TMEM39A-209ENST00000486235 SMIM27A0A1W2PRY6 76 aa4.56□□□□□ -1.68
TMEM39A-209ENST00000486235 INS-IGF2F8WCM5 200 aa4.56□□□□□ -1.68
TMEM39A-209ENST00000486235 ATP5G3P48201 142 aa4.56□□□□□ -1.68
TMEM39A-209ENST00000486235 AMTP48728 403 aa4.56□□□□□ -1.68
TMEM39A-209ENST00000486235 HERV-K104P63124 156 aa4.56□□□□□ -1.68
TMEM39A-209ENST00000486235 ZNF415Q09FC8 603 aa4.56□□□□□ -1.68
TMEM39A-209ENST00000486235 SPATA45Q537H7 98 aa4.56□□□□□ -1.68
TMEM39A-209ENST00000486235 SPINK9Q5DT21 86 aa4.56□□□□□ -1.68
TMEM39A-209ENST00000486235 SMIM15Q7Z3B0 74 aa4.56□□□□□ -1.68
TMEM39A-209ENST00000486235 ERASQ7Z444 233 aa4.56□□□□□ -1.68
TMEM39A-209ENST00000486235 CHCHD1Q96BP2 118 aaKnown RBP4.56□□□□□ -1.68
TMEM39A-209ENST00000486235 SGK494Q96LW2 274 aa4.56□□□□□ -1.68
TMEM39A-209ENST00000486235 ALKBH7Q9BT30 221 aaPredicted RBP4.56□□□□□ -1.68
TMEM39A-209ENST00000486235 NRN1Q9NPD7 142 aa4.56□□□□□ -1.68
TMEM39A-209ENST00000486235 NAT8BQ9UHF3 227 aa4.56□□□□□ -1.68
TMEM39A-209ENST00000486235 V9GYV3 84 aa4.56□□□□□ -1.68
TMEM39A-209ENST00000486235 TRBV20OR9-2A0A075B6H5 130 aa4.55□□□□□ -1.68
TMEM39A-209ENST00000486235 IGHV3OR16-12A0A075B7B8 117 aa4.55□□□□□ -1.68
TMEM39A-209ENST00000486235 A0A1B0GW15 77 aa4.55□□□□□ -1.68
TMEM39A-209ENST00000486235 A0A1W2PS18 150 aa4.55□□□□□ -1.68
TMEM39A-209ENST00000486235 hDV102S1A0JD36 115 aa4.55□□□□□ -1.68
TMEM39A-209ENST00000486235 CRXO43186 299 aaPredicted RBP4.55□□□□□ -1.68
TMEM39A-209ENST00000486235 APCSP02743 223 aa4.55□□□□□ -1.68
TMEM39A-209ENST00000486235 PPBPP02775 128 aa4.55□□□□□ -1.68
TMEM39A-209ENST00000486235 SPART-AS1P0CW21 52 aa4.55□□□□□ -1.68
TMEM39A-209ENST00000486235 HIST1H1EP10412 219 aaKnown RBP4.55□□□□□ -1.68
TMEM39A-209ENST00000486235 HSPE1P61604 102 aaKnown RBP4.55□□□□□ -1.68
TMEM39A-209ENST00000486235 PAPPA-AS1Q5QFB9 102 aa4.55□□□□□ -1.68
TMEM39A-209ENST00000486235 IBA57Q5T440 356 aaKnown RBP4.55□□□□□ -1.68
TMEM39A-209ENST00000486235 MRPL54Q6P161 138 aaKnown RBP4.55□□□□□ -1.68
TMEM39A-209ENST00000486235 Q6ZN92 141 aa4.55□□□□□ -1.68
TMEM39A-209ENST00000486235 TMEM136Q6ZRR5 245 aa4.55□□□□□ -1.68
TMEM39A-209ENST00000486235 OR1L4Q8NGR5 311 aa4.55□□□□□ -1.68
TMEM39A-209ENST00000486235 DCANP1Q8TF63 244 aa4.55□□□□□ -1.68
TMEM39A-209ENST00000486235 METTL26Q96S19 204 aa4.55□□□□□ -1.68
TMEM39A-209ENST00000486235 MGST2Q99735 147 aa4.55□□□□□ -1.68
TMEM39A-209ENST00000486235 GFRA4Q9GZZ7 299 aa4.55□□□□□ -1.68
TMEM39A-209ENST00000486235 NACAE9PAV3 2078 aa4.54□□□□□ -1.68
TMEM39A-209ENST00000486235 HSBP1L1C9JCN9 74 aa4.54□□□□□ -1.68
TMEM39A-209ENST00000486235 HYPMO75409 117 aa4.54□□□□□ -1.68
TMEM39A-209ENST00000486235 HSBP1O75506 76 aa4.54□□□□□ -1.68
TMEM39A-209ENST00000486235 IGKV3-20P01619 116 aa4.54□□□□□ -1.68
TMEM39A-209ENST00000486235 TSPOP30536 169 aa4.54□□□□□ -1.68
TMEM39A-209ENST00000486235 SUB1P53999 127 aaKnown RBP eCLIP4.54□□□□□ -1.68
TMEM39A-209ENST00000486235 FXYD7P58549 80 aa4.54□□□□□ -1.68
TMEM39A-209ENST00000486235 KRTDAPP60985 99 aa4.54□□□□□ -1.68
TMEM39A-209ENST00000486235 ERHP84090 104 aaKnown RBP4.54□□□□□ -1.68
TMEM39A-209ENST00000486235 PRCDQ00LT1 54 aa4.54□□□□□ -1.68
TMEM39A-209ENST00000486235 IZUMO4Q1ZYL8 232 aa4.54□□□□□ -1.68
TMEM39A-209ENST00000486235 C2orf83Q53S99 150 aa4.54□□□□□ -1.68
TMEM39A-209ENST00000486235 CENPWQ5EE01 88 aa4.54□□□□□ -1.68
TMEM39A-209ENST00000486235 FAM222AQ5U5X8 452 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 237.2 ms