RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 LINC00173Q6ZV60 143 aa6.54□□□□□ -1.36
CDC42SE1-204ENST00000483763 ORMDL3Q8N138 153 aa6.54□□□□□ -1.36
CDC42SE1-204ENST00000483763 TSSC4Q9Y5U2 329 aaPredicted RBP6.54□□□□□ -1.36
CDC42SE1-204ENST00000483763 IGHV4-4A0A075B6R2 117 aa6.54□□□□□ -1.36
CDC42SE1-204ENST00000483763 TRAV26-2A0A0B4J265 109 aa6.54□□□□□ -1.36
CDC42SE1-204ENST00000483763 C3orf79P0CE67 100 aa6.54□□□□□ -1.36
CDC42SE1-204ENST00000483763 FXYD7P58549 80 aa6.54□□□□□ -1.36
CDC42SE1-204ENST00000483763 KRTAP24-1Q3LI83 254 aa6.54□□□□□ -1.36
CDC42SE1-204ENST00000483763 EBLN2Q6P2I7 272 aa6.54□□□□□ -1.36
CDC42SE1-204ENST00000483763 PRELID3AQ96N28 172 aa6.54□□□□□ -1.36
CDC42SE1-204ENST00000483763 VAMP8Q9BV40 100 aa6.54□□□□□ -1.36
CDC42SE1-204ENST00000483763 SCRT2Q9NQ03 307 aa6.54□□□□□ -1.36
CDC42SE1-204ENST00000483763 RBMY1BA6NDE4 496 aaKnown RBP6.53□□□□□ -1.36
CDC42SE1-204ENST00000483763 RBMY1EA6NEQ0 496 aaKnown RBP6.53□□□□□ -1.36
CDC42SE1-204ENST00000483763 M0R381 172 aa6.53□□□□□ -1.36
CDC42SE1-204ENST00000483763 RBMY1DP0C7P1 496 aaKnown RBP6.53□□□□□ -1.36
CDC42SE1-204ENST00000483763 RBMY1A1P0DJD3 496 aaKnown RBP6.53□□□□□ -1.36
CDC42SE1-204ENST00000483763 RBMY1CP0DJD4 496 aa6.53□□□□□ -1.36
CDC42SE1-204ENST00000483763 CKS2P33552 79 aa6.53□□□□□ -1.36
CDC42SE1-204ENST00000483763 RBMY1FQ15415 496 aaKnown RBP6.53□□□□□ -1.36
CDC42SE1-204ENST00000483763 SPANXN1Q5VSR9 72 aa6.53□□□□□ -1.36
CDC42SE1-204ENST00000483763 FOXI2Q6ZQN5 318 aa6.53□□□□□ -1.36
CDC42SE1-204ENST00000483763 DYNLRB2Q8TF09 96 aa6.53□□□□□ -1.36
CDC42SE1-204ENST00000483763 SIGLEC8Q9NYZ4 499 aa6.53□□□□□ -1.36
CDC42SE1-204ENST00000483763 C7orf71A4D174 169 aa6.53□□□□□ -1.36
CDC42SE1-204ENST00000483763 SIVA1O15304 175 aa6.53□□□□□ -1.36
CDC42SE1-204ENST00000483763 PRM2P04554 102 aa6.53□□□□□ -1.36
CDC42SE1-204ENST00000483763 S100A4P26447 101 aaKnown RBP6.53□□□□□ -1.36
CDC42SE1-204ENST00000483763 SPATA12Q7Z6I5 190 aa6.53□□□□□ -1.36
CDC42SE1-204ENST00000483763 STPG4Q8N801 248 aa6.53□□□□□ -1.36
CDC42SE1-204ENST00000483763 CHCHD1Q96BP2 118 aaKnown RBP6.53□□□□□ -1.36
CDC42SE1-204ENST00000483763 PAM16Q9Y3D7 125 aa6.53□□□□□ -1.36
CDC42SE1-204ENST00000483763 TRAV25A0A0B4J276 109 aa6.52□□□□□ -1.37
CDC42SE1-204ENST00000483763 H3BMM0 161 aa6.52□□□□□ -1.37
CDC42SE1-204ENST00000483763 CRXO43186 299 aaPredicted RBP6.52□□□□□ -1.37
CDC42SE1-204ENST00000483763 ASIPP42127 132 aa6.52□□□□□ -1.37
CDC42SE1-204ENST00000483763 NSUN5P1Q3KNT7 163 aa6.52□□□□□ -1.37
CDC42SE1-204ENST00000483763 ODF3Q96PU9 254 aa6.52□□□□□ -1.37
CDC42SE1-204ENST00000483763 MAP6D1Q9H9H5 199 aa6.52□□□□□ -1.37
CDC42SE1-204ENST00000483763 MDFICQ9P1T7 246 aa6.52□□□□□ -1.37
CDC42SE1-204ENST00000483763 A0A096LNJ9 63 aa6.52□□□□□ -1.37
CDC42SE1-204ENST00000483763 BATFQ16520 125 aa6.52□□□□□ -1.37
CDC42SE1-204ENST00000483763 FAM159AQ6UWV7 190 aa6.52□□□□□ -1.37
CDC42SE1-204ENST00000483763 PRSS3P2Q8NHM4 247 aa6.52□□□□□ -1.37
CDC42SE1-204ENST00000483763 GEMIN7Q9H840 131 aaKnown RBP6.52□□□□□ -1.37
CDC42SE1-204ENST00000483763 AP5S1Q9NUS5 200 aa6.52□□□□□ -1.37
CDC42SE1-204ENST00000483763 PHLDA3Q9Y5J5 127 aa6.52□□□□□ -1.37
CDC42SE1-204ENST00000483763 CD7P09564 240 aa6.51□□□□□ -1.37
CDC42SE1-204ENST00000483763 HLA-DRB4P13762 266 aa6.51□□□□□ -1.37
CDC42SE1-204ENST00000483763 ODF3L2Q3SX64 289 aa6.51□□□□□ -1.37
CDC42SE1-204ENST00000483763 Q8N1Y9 231 aa6.51□□□□□ -1.37
CDC42SE1-204ENST00000483763 C14orf178Q8N769 122 aaPredicted RBP6.51□□□□□ -1.37
CDC42SE1-204ENST00000483763 JPT2Q9H910 190 aa6.51□□□□□ -1.37
CDC42SE1-204ENST00000483763 HLA-DRB4X5D2U9 266 aa6.51□□□□□ -1.37
CDC42SE1-204ENST00000483763 IGLC3P0DOY3 106 aa6.51□□□□□ -1.37
CDC42SE1-204ENST00000483763 LEPP41159 167 aa6.51□□□□□ -1.37
CDC42SE1-204ENST00000483763 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.51□□□□□ -1.37
CDC42SE1-204ENST00000483763 UQCR10Q9UDW1 63 aa6.51□□□□□ -1.37
CDC42SE1-204ENST00000483763 TRAV2A0A0B4J234 112 aa6.5□□□□□ -1.37
CDC42SE1-204ENST00000483763 A8MTW9 85 aa6.5□□□□□ -1.37
CDC42SE1-204ENST00000483763 DUSP14O95147 198 aaKnown RBP6.5□□□□□ -1.37
CDC42SE1-204ENST00000483763 CKS1BP61024 79 aa6.5□□□□□ -1.37
CDC42SE1-204ENST00000483763 CACNG7P62955 275 aa6.5□□□□□ -1.37
CDC42SE1-204ENST00000483763 NRACQ8N912 160 aa6.5□□□□□ -1.37
CDC42SE1-204ENST00000483763 SPAG8Q99932 426 aaPredicted RBP6.5□□□□□ -1.37
CDC42SE1-204ENST00000483763 MCRIP2Q9BUT9 160 aaKnown RBP6.5□□□□□ -1.37
CDC42SE1-204ENST00000483763 LAMTOR2Q9Y2Q5 125 aa6.5□□□□□ -1.37
CDC42SE1-204ENST00000483763 IGHV3-16A0A0C4DH30 117 aa6.5□□□□□ -1.37
CDC42SE1-204ENST00000483763 ATOH7Q8N100 152 aa6.5□□□□□ -1.37
CDC42SE1-204ENST00000483763 MTURNQ8N3F0 131 aa6.5□□□□□ -1.37
CDC42SE1-204ENST00000483763 COX11Q9Y6N1 276 aa6.5□□□□□ -1.37
CDC42SE1-204ENST00000483763 ANK2Q01484 3957 aa6.49□□□□□ -1.37
CDC42SE1-204ENST00000483763 LEPROTL1O95214 131 aa6.49□□□□□ -1.37
CDC42SE1-204ENST00000483763 TSPAN13O95857 204 aa6.49□□□□□ -1.37
CDC42SE1-204ENST00000483763 HTN1P15515 57 aa6.49□□□□□ -1.37
CDC42SE1-204ENST00000483763 FA2HQ7L5A8 372 aa6.49□□□□□ -1.37
CDC42SE1-204ENST00000483763 MRPS16Q9Y3D3 137 aaKnown RBP6.49□□□□□ -1.37
CDC42SE1-204ENST00000483763 OR4C46A6NHA9 309 aa6.49□□□□□ -1.37
CDC42SE1-204ENST00000483763 NXPH4O95158 308 aa6.49□□□□□ -1.37
CDC42SE1-204ENST00000483763 MED14OSP0DP75 135 aa6.49□□□□□ -1.37
CDC42SE1-204ENST00000483763 TSPOP30536 169 aa6.49□□□□□ -1.37
CDC42SE1-204ENST00000483763 LINC00315P59091 139 aa6.49□□□□□ -1.37
CDC42SE1-204ENST00000483763 OR2K2Q8NGT1 345 aa6.49□□□□□ -1.37
CDC42SE1-204ENST00000483763 SPATA3Q8NHX4 192 aa6.49□□□□□ -1.37
CDC42SE1-204ENST00000483763 KIF25-AS1Q9Y6Z4 181 aa6.49□□□□□ -1.37
CDC42SE1-204ENST00000483763 IGLV2-18A0A075B6J9 118 aa6.48□□□□□ -1.37
CDC42SE1-204ENST00000483763 IGHV1OR15-1A0A075B7D0 117 aa6.48□□□□□ -1.37
CDC42SE1-204ENST00000483763 SPATA45Q537H7 98 aa6.48□□□□□ -1.37
CDC42SE1-204ENST00000483763 C9orf85Q96MD7 179 aa6.48□□□□□ -1.37
CDC42SE1-204ENST00000483763 A0A087WWL8 130 aa6.47□□□□□ -1.37
CDC42SE1-204ENST00000483763 OR11H12B2RN74 326 aa6.47□□□□□ -1.37
CDC42SE1-204ENST00000483763 WIPF1O43516 503 aa6.47□□□□□ -1.37
CDC42SE1-204ENST00000483763 HNRNPA3P51991 378 aaKnown RBP6.47□□□□□ -1.37
CDC42SE1-204ENST00000483763 OR11H2Q8NH07 326 aa6.47□□□□□ -1.37
CDC42SE1-204ENST00000483763 RASL10AQ92737 203 aa6.47□□□□□ -1.37
CDC42SE1-204ENST00000483763 TMEM70Q9BUB7 260 aa6.47□□□□□ -1.37
CDC42SE1-204ENST00000483763 ZNF747Q9BV97 191 aa6.47□□□□□ -1.37
CDC42SE1-204ENST00000483763 WFDC10AQ9H1F0 79 aa6.47□□□□□ -1.37
CDC42SE1-204ENST00000483763 SYS1-DBNDD2H3BUS1 97 aa6.47□□□□□ -1.37
CDC42SE1-204ENST00000483763 M0QXV9 152 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms